CB290545

Overview
NameCB290545
Unique NameCB290545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:110..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.334e-40
Identity = 95/248 (38.31%), Postives = 137/248 (55.24%), Query Frame = 2
Query:   17 VSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGS---LISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQ 748
            V S L + +VSY    +  S       +    F  W+  H + Y++  E   R++IFK N+ ++ + NS+     +GLN FAD+TN+EYR+ +LG  F         +       ++      +VDWR +GAV  +K+QG CG CW+FST  + EG + I +G+   L+SLSEQ L+DC  SY N GC GGLM  AFE+II+N GIDTE  YPY A DG    ++ +     I  Y++V    E +LQ
Sbjct:    3 VLSFLCLLLVSYASAKQQFSEL-----QYRNAFTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDGSALIGTEEE------KIFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKECKFKTSNIGAQIVSYQNVTSGSEASLQ 238          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.334e-40
Identity = 95/214 (44.39%), Postives = 129/214 (60.28%), Query Frame = 2
Query:  113 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEA-LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQ 748
            F  +  ++GK Y ++ E + RF +FKENL  I   N +  +YK+ LN+FADLT +E++   LGA   A+  S   K S++    + EA +PD+ DWR+ G V+ VK+QG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GC+GGL   AFE+I  NGG+DTEE YPY   DG C    KN   V + D  ++ L  E  L+
Sbjct:   59 FSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGA---AQNCSATLKGSHK----ITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGGCKFSAKNIG-VQVRDSVNITLGAEDELK 264          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.355e-40
Identity = 94/242 (38.84%), Postives = 140/242 (57.85%), Query Frame = 2
Query:   26 ALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 745
            A ++++ S++K H                F++W+V+H K Y+ L E   R ++F  N R I+ HN+ N T+K+GLN+F+D++ +E R  +L +          S     YL   G   P S+DWRKKG  V+ VK+QGSCGSCW FST  A+E    I TG ++SL+EQ+LVDC  ++ N GC GGL   AFE+I  N GI  E+ YPYK  D  C  ++ +  +  + D  ++ +NDE+A+
Sbjct:   22 ASNLAVSSFEKLH----------------FKSWMVQHQKKYS-LEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSE-----PQNCSATKGNYLRGTGP-YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHC-KFQPDKAIAFVKDVANITMNDEEAM 239          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.355e-40
Identity = 90/199 (45.23%), Postives = 121/199 (60.80%), Query Frame = 2
Query:  113 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTID 706
            F  +  ++GK Y  + E + RF IFKENL  I   N +  +YK+G+N+FADLT +E++   LGA   A+  S   K S++       ALP++ DWR+ G V+ VKDQG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTE+ YPY   D +C    +N  V  ++
Sbjct:   59 FARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGA---AQNCSATLKGSHKVTEA---ALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAENVGVQVLN 251          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.688e-40
Identity = 91/216 (42.13%), Postives = 123/216 (56.94%), Query Frame = 2
Query:  113 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQ 748
            +E W   H K YN+  ++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G R    R+         Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC T  N GC GG M  AF+++  NGGID+E+ YPY   D SC  Y   AK      Y ++P+ +EKAL+
Sbjct:   26 WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSRSY---SNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE-NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALK 236          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.702e-40
Identity = 92/229 (40.17%), Postives = 131/229 (57.21%), Query Frame = 2
Query:   74 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 745
            S++ + D  + A +  W   H + Y  + E+E R  ++++N + ID HN E       +++ +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I DNG +D+EE YPY A D +   Y+          + D+P   EKAL
Sbjct:   16 SAAPKLDPNLDAHWHQWKATHRRLYG-MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP-QREKAL 236          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.655e-39
Identity = 92/229 (40.17%), Postives = 129/229 (56.33%), Query Frame = 2
Query:   74 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKAL 745
            S++ + D  + A +  W   H + Y  + E+  R  ++++N++ I+ HN E    K G    +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  NEGCNGGLMD AF ++ DNGG+D+EE YPY   D     Y+          + D+P   EKAL
Sbjct:   16 SAAPKFDQSLNAQWYQWKATHRRLYG-MNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKMFQEPLFAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLP-QREKAL 236          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.823e-39
Identity = 92/218 (42.20%), Postives = 126/218 (57.80%), Query Frame = 2
Query:  113 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQ 748
            +E W   H K YN+  ++  R  I+++NL++I  HN E      TY++ +N   D+TNEE      G +  A  +     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   + SC  Y    K      Y ++P  +EKAL+
Sbjct:   26 WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALK 236          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.823e-39
Identity = 92/218 (42.20%), Postives = 126/218 (57.80%), Query Frame = 2
Query:  113 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQ 748
            +E W   H K YN+  ++  R  I+++NL++I  HN E      TY++ +N   D+TNEE      G +  A  +     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   + SC  Y    K      Y ++P  +EKAL+
Sbjct:   26 WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALK 236          
BLAST of CB290545 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.823e-39
Identity = 92/218 (42.20%), Postives = 127/218 (58.26%), Query Frame = 2
Query:  113 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQ 748
            +E W   + K YN+ G++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G +  A R+     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   D +C  Y    K      Y ++P  +EKAL+
Sbjct:   26 WELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASRS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENC-MYNPTGKAAKCRGYREIPEGNEKALK 236          
The following BLAST results are available for this feature:
BLAST of CB290545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CYSP4_DICDI3.334e-4038.31Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
ALEUL_ARATH3.334e-4044.39Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATH_PIG4.355e-4038.84Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
ALEU_ARATH4.355e-4045.23Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CATK_MOUSE5.688e-4042.13Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATL2_BOVIN9.702e-4040.17Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_CANFA1.655e-3940.17Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATK_MACMU2.823e-3942.20Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA2.823e-3942.20Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_BOVIN2.823e-3942.20Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cb07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cb07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290545 ID=CB290545; Name=CB290545; organism=Citrus sinensis; type=EST; length=750bp
TTTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCTT
ATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAG
GTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAA
CGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTA
GGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTG
AACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGG
TGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACC
GTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGG
AAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTG
CTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTA
CAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACA
TCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTT
CATTATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAG
CCATTGATGGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACA
ATTGATGACTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAA
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