CB290546

Overview
NameCB290546
Unique NameCB290546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:567..1377. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290546 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 6.996e-18
Identity = 66/191 (34.55%), Postives = 93/191 (48.69%), Query Frame = -1
Query:  261 KPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGAPGVKRLKSI-----GMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSLGQ 812
            K A   LDE  I Y E ++ Y V     +        + A    +L N V+ ED++++ G R+ G+V NW    M       +DP  + A+VV+   GHD        K++        G+I E P   AL     E  +V   REV PG+IV GM    +   PRMGP FG M++SG+KAA +AL+ L Q
Sbjct:   78 KEACRILDEYDIWYREFEEGYYVADSIEVVAKLTAGAIDA--GAELINLVSVEDVMIREGDRIVGLVINWTAADM---AGIHVDPLAIRARVVIDGTGHDAAVCRVVQKKIPGAIVGESGVIGEKPMWAAL----GEKIVVDATREVYPGLIVAGMAATTVAAGPRMGPIFGGMLLSGEKAASIALEKLAQ 259          
BLAST of CB290546 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18
Identity = 58/183 (31.69%), Postives = 92/183 (50.27%), Query Frame = -1
Query:  267 PAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGAPGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSL 809
            PA   L E+ I  ++ ++ V I  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    A   +++  +G++  +PG ++     AE   V     V PG+ V GM V E+ G PRMGP FG+M++SG+K A   +K L
Sbjct:   86 PADEVLKEMNIRLEKVEDGVYIVDSAEFMAKLAASAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---AGLHVDPVFISAKAVVDATGHDAEVVAVASRKIPELGIV--IPGERSAYSEMAEKLTVEQTGVVAPGLYVAGMSVTEVRGLPRMGPIFGSMVLSGKKVAEDIIKDL 262          
BLAST of CB290546 vs. ExPASy Swiss-Prot
Match: THI4_METS5 (Putative thiazole biosynthetic enzyme OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_2221 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18
Identity = 61/186 (32.80%), Postives = 92/186 (49.46%), Query Frame = -1
Query:  267 PAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARP---NVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGAPGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSL 809
            PA   L E+G+   + +  V +  ++ F    M+KL A       K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE   V    EV PG+   GM V EI   PRMGP FGAM++SG+K A   +K+L
Sbjct:   82 PADEILREIGVKLQKFEEGVYVVDSSEF----MAKLAAATIDAGAKIIHGVTVDDVIFRENPLRVTGVAVEWTATQM---ASLHVDPLFISAKAVVDATGHDAEVISVASRKIPELGIV--IPGEKSAYSEIAEQLTVEQSGEVAPGLYAAGMAVTEIKAIPRMGPIFGAMLLSGKKVAEDIIKNL 258          
BLAST of CB290546 vs. ExPASy Swiss-Prot
Match: THI4_METMJ (Putative thiazole biosynthetic enzyme OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_2251 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.472e-17
Identity = 60/184 (32.61%), Postives = 87/184 (47.28%), Query Frame = -1
Query:  261 AHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGAPGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSLGQ 806
            A   LD  GI Y   ++ Y V K         ++       V+ FN    ED++++G GR+GG+V NW  V M       +DP  M     V + GHD        + ++  G    V G   +    AE  I+   +EV PG+ VTGM    + G  RMGP FG M++SG++AA L  + LG+
Sbjct:   80 ARRLLDRFGIAYKAFEEGYYVAKSVEAVAK--LTAAACDAGVEFFNLTTVEDVMIRGDGRIGGLVVNWTPVDM---AGLHVDPLTMACTCTVDATGHDAMIA----RMVEKKGGALTVKGESFMWAERAESQILAHTKEVFPGLFVTGMAANAVAGECRMGPIFGGMLLSGERAAELVAERLGR 254          
BLAST of CB290546 vs. ExPASy Swiss-Prot
Match: THI4_SULTO (Putative thiazole biosynthetic enzyme OS=Sulfolobus tokodaii GN=ST0361 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 55/183 (30.05%), Postives = 92/183 (50.27%), Query Frame = -1
Query:  267 PAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGAPGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSL 809
            PA   L E+ I  ++ +  V I  +A F + + +  +     K+ + V  +D+I +    +V GV   W    M       +DP  + AK VV + GHD    +   +++  + ++  +PG K+    +AE+  V     V PG+   GM V E+ G PRMGP FGAM++SG++ A + +K L
Sbjct:   87 PADEILKEMKIKLNKVEEGVYIVDSAEFMAKLAASAIDA-GAKIIHGVTVDDVIFRENPLKVVGVAVEWTATQM---AGLHVDPLFISAKAVVDATGHDAEVISVAARKIPELNIV--IPGEKSAYSETAEELTVENTGMVAPGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKRVAEIIIKDL 263          
BLAST of CB290546 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 58/184 (31.52%), Postives = 90/184 (48.91%), Query Frame = -1
Query:  267 KPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGAPGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSL 812
            KPA   L E+ I   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V    +V  G+  TGM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:   83 KPADEILREVNIRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYATGMAVTEVKGLPRMGPIFGAMVLSGKAVAGEITKDL 260          
BLAST of CB290546 vs. ExPASy Swiss-Prot
Match: THI4_METTH (Putative thiazole biosynthetic enzyme OS=Methanobacterium thermoautotrophicum GN=MTH_1620 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.319e-16
Identity = 57/182 (31.32%), Postives = 96/182 (52.75%), Query Frame = -1
Query:  267 LDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGAPGVKRL-KSIGMIEEVP-----GMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSL 794
            LDE GI  +  D    +  +   TST+ S+   +  +K+FN ++ ED++++   + G+V NW+ V M       +DP  + A+ V+ + GHD       VK + + IG     P     G +++  +  E A++   REV P + V GM    + GAPRMGP FG M++SG++ A + ++ L
Sbjct:   84 LDEFGIRSEPYDEGYHVADSVEATSTLCSRA-CQAGLKIFNLMSIEDVMIRDEGITGLVLNWSSVEM---AGLHVDPLTVRARAVIDATGHDCEI----VKVVERKIGPELNTPDGRIQGERSMWADVGEAALIENTREVYPNLYVAGMASNAVYGAPRMGPIFGGMLVSGRRVAEMIIEKL 257          
BLAST of CB290546 vs. ExPASy Swiss-Prot
Match: THI4_SULIY (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1786 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.723e-16
Identity = 56/184 (30.43%), Postives = 89/184 (48.37%), Query Frame = -1
Query:  267 KPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGAPGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSL 812
            KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V    +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:   83 KPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CB290546 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.723e-16
Identity = 56/184 (30.43%), Postives = 89/184 (48.37%), Query Frame = -1
Query:  267 KPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGAPGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSL 812
            KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V    +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:   83 KPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CB290546 vs. ExPASy Swiss-Prot
Match: THI4_SULIL (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1798 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.723e-16
Identity = 56/184 (30.43%), Postives = 89/184 (48.37%), Query Frame = -1
Query:  267 KPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGAPGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSL 812
            KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V    +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:   83 KPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
The following BLAST results are available for this feature:
BLAST of CB290546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
THI4_METTP6.996e-1834.55Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_SULAC9.137e-1831.69Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METS59.137e-1832.80Putative thiazole biosynthetic enzyme OS=Metallosp... [more]
THI4_METMJ3.472e-1732.61Putative thiazole biosynthetic enzyme OS=Methanocu... [more]
THI4_SULTO5.923e-1730.05Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULSO5.923e-1731.52Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METTH1.319e-1631.32Putative thiazole biosynthetic enzyme OS=Methanoba... [more]
THI4_SULIY1.723e-1630.43Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIM1.723e-1630.43Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIL1.723e-1630.43Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cb08_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cb08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290546 ID=CB290546; Name=CB290546; organism=Citrus sinensis; type=EST; length=812bp
TTTTTTTTTTTTTTTTTGACCGGAAAAAACACTTTATTCACAAAACCTCA
CAACATTATCTCATTATTCGCATCAACCATCCATCACAACCACCTAAATA
CAACTACTTTTTTGCCAGAGTTTATTTGCATGCACACAGCTGATGAGTGA
TGATGCCTGTTATTACCAAATTAAGCATCAGCAGTCTCAGCAGAATCAGC
TGCAGCTAAGATCAGCTCAGGGGGAACGCCTCCCACATATGTACCGTCTA
ATGCATTCGGCTGGCCCAGTGACTTCAACGCCAAATGCGCAGCCTTCTGC
CCCGATATCATCATTGCTCCAAATGGTGGCCCCATTCGAGGAGCACCATC
AATCTCGGCAACTTCCATGCCGGTAACTATCATACCAGGCACAACCTCCC
TGGGCAGCCTCACAATAGCATCTTCTGCAGAGTTCATGTCCAGTGCCTTC
ATTCCAGGCACTTCCTCAATCATTCCGATACTCTTCAACCTCTTTACTCC
AGGGGCCCCAAAAGGCCCATCATGGCCACAAGAGCTCACAACCACCTTCG
CTTCCATTACATTGGGATCCATGCAAGACTGTGTATCGTGATTCATTGAC
ACCAACGCCCAGTTGGTCACCACACCACCAACTCTGCCGCCTTTGACTAT
CAAGTCCTCGGCTGCCACTGCATTAAAGAGCTTGACGTTGGGGCGGGCCA
GGAGCTTGCTCATTATAGTGGAGGTGAACAGCGCTGCATGCTTGATCACA
ACATAGTTGTCTTGCTCATCGTAGTCGATGCCAAGCTCGTCAAGGAAGAT
GTGGGCTGGTTT
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