CB290556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: FAL1_USTMA (ATP-dependent RNA helicase FAL1 OS=Ustilago maydis GN=FAL1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.328e-15 Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 2 Query: 356 ATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 ATTF+ + L +LL+G+Y F+KPS IQ ++ I+ R++IAQA++G+GKT F + ML +D L+ QAL + PTRELAIQ V+ +G + + +C T+ ++ +V GTPG + Sbjct: 23 ATTFDAMGLKEDLLRGIYA-YNFEKPSAIQQRAILPIIRG--RDVIAQAQSGTGKTATFSISMLQSIDTTLRETQALVLSPTRELAIQIQSVVLALGDYLNV--QCHACIGGTSVGEDIRKLDYGQHIVSGTPGRV 153
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.040e-15 Identity = 49/133 (36.84%), Postives = 79/133 (59.40%), Query Frame = 2 Query: 365 FEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 F+DLNL P +++G++ ++ PS IQ ++ I R+++AQA++G+GKT F + L R+D N K+ QAL + PTRELA+Q V+ +G + +T ++ S + R V QVV+GTPG + Sbjct: 25 FDDLNLKPNIVRGIF-GYGYETPSAIQQRAILPITEG--RDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMQDDIEAFRSGV--QVVVGTPGRV 152
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.040e-15 Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 2 Query: 305 EDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 ED +K T+ + TFE +NL +LL+G+Y F+ PS IQ+ ++ I++ ++IAQA++G+GKT F +GML +D K QAL + PTRELA Q +V+ +G + + S A+ T +++ QVV GTPG + Sbjct: 7 EDKKLKFKTSKKLKISP--TFESMNLKDDLLRGIY-GYGFEAPSAIQSRAITQIISGT--DVIAQAQSGTGKTATFTIGMLQAIDLKRKDLQALVLSPTRELASQINQVVSNLGDYMNVQS-YAMTGGKTMKDDLNRMQKNGCQVVSGTPGRV 153
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DEAD_MYCTU (Cold-shock DEAD box protein A homolog OS=Mycobacterium tuberculosis GN=deaD PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.971e-15 Identity = 49/141 (34.75%), Postives = 82/141 (58.16%), Query Frame = 2 Query: 341 TPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPIS--KRPPVTAQVVIGTPG 757 +P SA TF DL + P +L+ + ++ ++ P+ IQA ++P ++ +++ A+ G+GKT F + MLS++D K PQAL + PTRELA+Q E + G + + + S+ V ++ +R AQVV+GTPG Sbjct: 7 SPAASAATFADLQIHPRVLRAIG-DVGYESPTAIQAATIPALMAGS--DVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRR---GAQVVVGTPG 141
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: IF4A_MAGGR (ATP-dependent RNA helicase eIF4A OS=Magnaporthe grisea GN=TIF1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.186e-15 Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 2 Query: 362 TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 +F+++NL ELL+G+Y F++PS IQ ++ ++ ++IAQA++G+GKT F + +L ++D N+K QAL + PTRELA Q +V+ +G I EC T+ K QVV+GTPG + Sbjct: 24 SFDEMNLKSELLRGIYA-YGFERPSAIQQRAIMPVIKG--HDVIAQAQSGTGKTATFSISVLQKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMNI--ECHACIGGTSVRDDMKALQDGPQVVVGTPGRV 152
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: IF4A_LODEL (ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus GN=TIF1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.186e-15 Identity = 47/134 (35.07%), Postives = 80/134 (59.70%), Query Frame = 2 Query: 365 FEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAV-PTDSTNYVPISKRPPVTAQVVIGTPGTI 763 F+DLNL P +++G++ ++ PS IQ ++ I R+++AQA++G+GKT F + L R+D N K+ QAL + PTRELA+Q V+ +G + +T ++ T ++ + K Q+V+GTPG + Sbjct: 25 FDDLNLKPNIVRGIF-GYGYETPSAIQQRAILPITEG--RDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMSDDIEAFKS---GVQIVVGTPGRV 152
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: IF4A_ASPOR (ATP-dependent RNA helicase eIF4A OS=Aspergillus oryzae GN=tif1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.186e-15 Identity = 54/143 (37.76%), Postives = 81/143 (56.64%), Query Frame = 2 Query: 338 DTPYTSAT-TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 +T Y T +F+ + L PELL+G+Y F++PS IQ ++ I+ ++IAQA++G+GKT F + L ++DPN+K QAL + PTRELA Q +V+ +G IT C T K +VV+GTPG + Sbjct: 40 ETNYDEITDSFDAMELKPELLRGVYA-YGFERPSAIQQRAIKPIIKGS--DVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNIT--CHACIGGTAVREDMKALGEGPEVVVGTPGRV 177
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: FAL1_SCHPO (ATP-dependent RNA helicase fal1 OS=Schizosaccharomyces pombe GN=tif412 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.186e-15 Identity = 49/150 (32.67%), Postives = 87/150 (58.00%), Query Frame = 2 Query: 314 SIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 +++ T+ D + ++FE++NL +LL+G+Y ++ PS +Q+ ++ I R++IAQA++G+GKT F +G+L +D +++ QAL + PTRELA+Q V+ +G H + +C T+ K+ VV GTPG + Sbjct: 8 NVELTTSEDV--NAVSSFEEMNLKEDLLRGIYA-YGYETPSAVQSRAIIQICKG--RDVIAQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNV--QCHACIGGTSVGNDIKKLDYGQHVVSGTPGRV 150
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: FAL1_COCIM (ATP-dependent RNA helicase FAL1 OS=Coccidioides immitis GN=FAL1 PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.186e-15 Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 296 DEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 D D I+ T+ + T A TF+D++L LL+G+Y F+ PS IQ+ ++ I R+ IAQA++G+GKT F + +L +D L+ QAL + PTRELA Q V+ +G + + +C TN ++ VV GTPG + Sbjct: 6 DRTADERIEFTTSKEV--TVAPTFDDMHLKENLLRGIYA-YGFESPSAIQSRAIVQICKG--RDTIAQAQSGTGKTATFAISILQVIDTALRETQALVLSPTRELATQIQNVIMAVGDYMNV--QCHACIGGTNVGDDIRKLDHGQHVVSGTPGRV 154
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: IF4A_YARLI (ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica GN=TIF1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.773e-15 Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = 2 Query: 359 TTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T+F+DL L ELL+G+Y F+ PS IQ ++ ++ +++AQA++G+GKT F + L +D +K PQAL I PTRELA Q +V+ G++ I EC T+ + V++GTPG I Sbjct: 22 TSFDDLGLKDELLRGIY-GYGFENPSSIQQRAILPVIKG--NDVLAQAQSGTGKTATFSISALQNIDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYMKI--ECHACIGGTSVAEDIRVIQEGVHVIVGTPGRI 151 The following BLAST results are available for this feature:
BLAST of CB290556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290556 ID=CB290556; Name=CB290556; organism=Citrus sinensis; type=EST; length=781bpback to top |