CB290556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DDX25_XENLA (ATP-dependent RNA helicase DDX25 OS=Xenopus laevis GN=deadsouth PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.030e-27 Identity = 70/145 (48.28%), Postives = 95/145 (65.52%), Query Frame = 2 Query: 341 TPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKW 772 +P S +FE+L+L ELL+G+Y M F +PSKIQ +LPM+L P +NLIAQ+++G+GKT FVL MLSRVD N K PQ +C+ PT ELA+Q +V+ +MGK GI A+ + K + AQ+VIGTPGT+ W Sbjct: 91 SPLFSVKSFEELHLKNELLRGIYA-MGFNRPSKIQENALPMMLADPPQNLIAQSQSGTGKTAAFVLAMLSRVDANKKYPQCICLSPTFELALQTGKVVEEMGKFCAGIEVIYALRGNRP-----GKGSRLEAQIVIGTPGTVLDW 229
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DDX25_MOUSE (ATP-dependent RNA helicase DDX25 OS=Mus musculus GN=Ddx25 PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.522e-27 Identity = 77/187 (41.18%), Postives = 105/187 (56.15%), Query Frame = 2 Query: 218 SEDKSTAELDVEGLTIDE--SKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKW 772 +ED E DV L + +K + + L E+ +P S TFE+L L ELLKG+Y M F +PSKIQ ++LPM+L P +NLIAQ+++G+GKT FVL MLSRV+ PQ LC+ PT ELA+Q V+ +MGK + E I + VT Q++IGTPGT+ W Sbjct: 49 TEDDDDDEDDVVDLAANSLLNKLIRQSLIESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVERMGKFC-VDVEVMYAIRGNR---IPRGTEVTKQIIIGTPGTVLDW 230
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DD19B_HUMAN (ATP-dependent RNA helicase DDX19B OS=Homo sapiens GN=DDX19B PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.522e-27 Identity = 66/148 (44.59%), Postives = 98/148 (66.22%), Query Frame = 2 Query: 338 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGK-HTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMS 778 ++P S +FE+L L P+LL+G+Y M F +PSKIQ +LP++L P +NLIAQ+++G+GKT FVL MLS+V+P K PQ LC+ PT ELA+Q +V+ +MGK + + AV + + + ++ Q+VIGTPGT+ W S Sbjct: 85 NSPLYSVKSFEELRLKPQLLQGVYA-MGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNK-----LERGQKISEQIVIGTPGTVLDWCS 226
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DDX25_RAT (ATP-dependent RNA helicase DDX25 OS=Rattus norvegicus GN=Ddx25 PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 7.713e-27 Identity = 79/189 (41.80%), Postives = 106/189 (56.08%), Query Frame = 2 Query: 212 NTSEDKSTAELDVEGLTIDE--SKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKW 772 NT ED E DV L + +K + + L E+ +P S TFE+L L ELLKG+Y M F +PSKIQ ++LPM+L P +NLIAQ+++G+GKT FVL ML+RV+ PQ LC+ PT ELA+Q V+ +MGK + E I + VT Q+VIGTPGT+ W Sbjct: 48 NTEEDDD--EDDVVDLAANSLLNKLIRQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLNRVNALELFPQCLCLAPTYELALQTGRVVERMGKFC-VDVEVMYAIRGNR---IPRGTDVTKQIVIGTPGTVLDW 229
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DDX25_BOVIN (ATP-dependent RNA helicase DDX25 OS=Bos taurus GN=DDX25 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.713e-27 Identity = 69/144 (47.92%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 341 TPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKW 772 +P S TFE+L L ELLKG+Y M F +PSKIQ ++LPM+L P +NLIAQ+++G+GKT FVL MLSRV+ PQ LC+ PT ELA+Q V+ +MGK + N +P + VT Q+VIGTPGT+ W Sbjct: 91 SPLYSVKTFEELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALKLFPQCLCLAPTYELALQTGRVVERMGKF--CVDVQVMYAIRGNRIP--RGTDVTKQIVIGTPGTVLDW 229
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DDX25_HUMAN (ATP-dependent RNA helicase DDX25 OS=Homo sapiens GN=DDX25 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.718e-26 Identity = 73/187 (39.04%), Postives = 106/187 (56.68%), Query Frame = 2 Query: 212 NTSEDKSTAELDVEGLTIDESKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKW 772 N +++ +L L +K +++ L E+ +P S TFE+L L ELLKG+Y M F +PSKIQ ++LPM+L P +NLIAQ+++G+GKT FVL MLSRV+ PQ LC+ PT ELA+Q V+ +MGK + N +P + +T Q++IGTPGT+ W Sbjct: 51 NEDDEEDVVDLAANSLL---NKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKF--CVDVQVMYAIRGNRIP--RGTDITKQIIIGTPGTVLDW 229
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_NEOFI (ATP-dependent RNA helicase dbp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp5 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.219e-25 Identity = 68/147 (46.26%), Postives = 91/147 (61.90%), Query Frame = 2 Query: 338 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL----KAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 + P S FEDL L P +LKGL M F+KPSKIQ +LP++L P +NL+ Q+++G+GKT FVL LSRVD + K PQAL + PTRELA Q L V++ MG+ G+ AVPTD S+ + +V+GTPGT+ Sbjct: 70 NNPLYSVKNFEDLGLDPRILKGLS-NMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDGLIIGAAVPTDRD-----SRPKRLECSIVVGTPGTV 210
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_ASPFU (ATP-dependent RNA helicase dbp5 OS=Aspergillus fumigatus GN=dbp5 PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 7.219e-25 Identity = 68/147 (46.26%), Postives = 91/147 (61.90%), Query Frame = 2 Query: 338 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL----KAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 + P S FEDL L P +LKGL M F+KPSKIQ +LP++L P +NL+ Q+++G+GKT FVL LSRVD + K PQAL + PTRELA Q L V++ MG+ G+ AVPTD S+ + +V+GTPGT+ Sbjct: 70 NNPLYSVKNFEDLGLDPRILKGLS-SMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDGLIIGAAVPTDRD-----SRPKRLECSIVVGTPGTV 210
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_PHANO (ATP-dependent RNA helicase DBP5 OS=Phaeosphaeria nodorum GN=DBP5 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.231e-24 Identity = 74/194 (38.14%), Postives = 109/194 (56.19%), Query Frame = 2 Query: 218 SEDKSTAELDVEG---------LTIDESKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKK 769 +E + A+ V+G LT E K K D D + P SA +FE+L LS ELLKG+ M F+KPSKIQ +LP++L P N+IAQ+++G+GKT F L +LSR+D + PQA+ + P+RELA Q L V+ MG+ G+ + A+P P + + A V++GTPGT+++ Sbjct: 16 AEQSTVAQAQVDGSGEPANGSPLTETEYKVEVKLADMQADPN--------NPLYSAQSFEELQLSEELLKGVR-NMNFRKPSKIQEKALPLLLMNPPTNMIAQSQSGTGKTAAFSLNILSRIDLSRNEPQAIALAPSRELARQILGVITHMGQFMEGLKTMAAIPD------PTKRNQRLDAHVLVGTPGTVQE 194
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_BOTFB (ATP-dependent RNA helicase dbp5 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp5 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.608e-24 Identity = 64/143 (44.76%), Postives = 91/143 (63.64%), Query Frame = 2 Query: 341 TPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVD-PNLKAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 +P S TFE L + +LKGLY M F+KPSKIQ +LP++L P N+IAQ+++G+GKT FV+ +LSR+D PQALC+ P+RELA Q V+R +G+ G+T + A+P + + V A VV+GTPGT+ Sbjct: 63 SPLYSVETFEQLGIDASILKGLYA-MNFKKPSKIQEKALPLLLRNPPTNMIAQSQSGTGKTAAFVITILSRLDFSKPTTPQALCLAPSRELARQIEGVIRSIGQFVDGLTVQAAIPG------AVERNAKVNAMVVVGTPGTV 198 The following BLAST results are available for this feature:
BLAST of CB290556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290556 ID=CB290556; Name=CB290556; organism=Citrus sinensis; type=EST; length=781bpback to top |