CB290556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DRS1_GIBZE (ATP-dependent RNA helicase DRS1 OS=Gibberella zeae GN=DRS1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.543e-11 Identity = 58/187 (31.02%), Postives = 93/187 (49.73%), Query Frame = 2 Query: 206 TANTSEDKSTAELDVEGLTIDESKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRV---DPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPG 757 T + +D S A D E +E+K+ F E E++ K T A++F+ ++LS +++GL + F KP+ IQA S+P+ L ++++ A GSGKT F+L +L R+ + + + + PTRELAIQ V K+ T I AV S + + + V+I TPG Sbjct: 214 TNHPDDDASDASDDEEDAE-EEAKRKAFFAPEEENNPDKKAT--------ASSFQTMSLSRPIMRGL-ASVGFTKPTPIQAKSIPIALMG--KDVVGGAETGSGKTGAFILPILERLLYRPKKIPTTRVVVLLPTRELAIQCHAVATKLAAFTDIKFTLAVGGLSLKAQELELK--LRPDVIIATPG 386
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBPA_ECOLI (ATP-independent RNA helicase dbpA OS=Escherichia coli (strain K12) GN=dbpA PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.543e-11 Identity = 47/143 (32.87%), Postives = 73/143 (51.05%), Query Frame = 2 Query: 359 TTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGK---HTGITSEC-----AVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T F LN+ P E+ + + +QA +LP IL +++ QA+ GSGKT F LG+L ++D +L QAL +CPTRELA Q LR++ + +T I + C + DS + P +++ TPG + Sbjct: 2 TAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAG--KDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAP---------HIIVATPGRL 133
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DRS1_ASPFU (ATP-dependent RNA helicase drs1 OS=Aspergillus fumigatus GN=drs1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11 Identity = 58/185 (31.35%), Postives = 91/185 (49.19%), Query Frame = 2 Query: 218 SEDKSTAELDVEGLTIDESKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRV---DPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVP--ISKRPPVTAQVVIGTPG 757 S+++S AE +V+ +E++K F E S+ + T +F+D NLS +L+GL + F P+ IQ ++P+ L ++++ A GSGKT FV+ +L R+ + + + PTRELA+Q V K+ HT IT V S + KRP V+I TPG Sbjct: 274 SDEESEAESEVDA---EEAEKRKAFFAPEEKSTAVS--------TFNRSFQDFNLSRPILRGL-ASVNFTTPTPIQQKTIPVALLG--KDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATHTDITFCQLVGGFSLREQENILKKRP----DVIIATPG 440
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DDX54_DICDI (ATP-dependent RNA helicase ddx54 OS=Dictyostelium discoideum GN=helA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11 Identity = 51/188 (27.13%), Postives = 93/188 (49.47%), Query Frame = 2 Query: 212 NTSEDKSTAELDVEGLTIDESKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAP--QALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDS--TNYVPISKRPPVTAQVVIGTPGTI 763 N D ++ + I+ S+K F + + + T+ T F+ ++L+ LLK + ++ F P+ IQ S+PMIL +++ AR GSGKT FV+ M+ ++ + +A+ + PTRELAIQ +V++ + T + + V DS + +++ P ++I TPG + Sbjct: 183 NADADNKKSKKSNKKEEIESSEKFESFPMDENNEQEEETTSKKKKKTGG--FQSMDLTKNLLKAI-LKKGFNVPTPIQRKSIPMILDG--HDIVGMARTGSGKTGAFVIPMIQKLGDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNP----DIIIATPGRL 361
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP9_EMENI (ATP-dependent RNA helicase dbp9 OS=Emericella nidulans GN=dbp9 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11 Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 2 Query: 365 FEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRV------DPNLKAPQALCICPTRELAIQNLEVLRKMGKHTG 658 FE LNL P L + L V+ KF KP+ +QA ++P+ L ++++A+A+ GSGKT +VL +L + DP++KA L + PTRELA Q +V+ G Sbjct: 30 FETLNLDPRLRQAL-VKEKFSKPTPVQAKAIPLALEG--KDILARAKTGSGKTAAYVLPILQTILQKKAIDPSMKATTGLILVPTRELAEQVQKVITTFAAFCG 130
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP10_MAGGR (ATP-dependent RNA helicase DBP10 OS=Magnaporthe grisea GN=DBP10 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11 Identity = 46/135 (34.07%), Postives = 76/135 (56.30%), Query Frame = 2 Query: 365 FEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLK--APQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDS--TNYVPISKRPPVTAQVVIGTPG 757 F+ + L+P LL+ + F P+ IQ S+P+IL R+++ AR GSGKT FV+ M+ R+ + +AL + P+RELA+Q L+V+++ GK T + + V DS + ++ P ++I TPG Sbjct: 92 FQAMGLNPSLLQAI-TRKGFAVPTPIQRKSIPLILDR--RDVVGMARTGSGKTAAFVIPMIERLRAHSARVGARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGGDSLEDQFGFMTTNP----DIIIATPG 219
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP10_ASPTN (ATP-dependent RNA helicase dbp10 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dbp10 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11 Identity = 53/179 (29.61%), Postives = 92/179 (51.40%), Query Frame = 2 Query: 239 ELDVEGLTIDESKKVNK-FLDEAEDSSI-KTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLK--APQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDS--TNYVPISKRPPVTAQVVIGTPG 757 ELD G +D+ + ++ F+ E + S+ K F+ + L+ LLK + F P+ IQ ++P+I+ R+++ AR GSGKT FV+ M+ ++ + + L + P+RELA+Q L+V++++GK T + S V DS + ++ P +VI TPG Sbjct: 47 ELDFLGGNVDDDDEDDEAFIAEQQTSANRKAANLKGRTVKKGGGFQAMGLNANLLKAI-TRKGFSVPTPIQRKTIPVIMDD--RDVVGMARTGSGKTAAFVIPMIEKLKSHSSKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNP----DIVIATPG 218
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: MAK5_ASPOR (ATP-dependent RNA helicase mak5 OS=Aspergillus oryzae GN=mak5 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11 Identity = 58/210 (27.62%), Postives = 99/210 (47.14%), Query Frame = 2 Query: 209 ANTSEDKSTAELDVEGLTIDESKKVNKFLDEAEDSSIKT------VTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKA------------PQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSA 781 A E K+ + + ++ K ++ ED IK+ + + + +E L LSPE+L G+ +MKF P+ +Q +P IL R++I +A GSGKT F + +L L++ P AL + PTRELA Q + + ++ H G+ + A+ T + + +R A +VIGTPG + + +S+ Sbjct: 128 AKVKESKNAKKEKKKNAKDARKEQKEKAVESKEDKGIKSGLSFAALQEEEDDGADVSAWESLGLSPEILAGIS-KMKFTTPTSVQKACIPPILDG--RDVIGKASTGSGKTLAFGIPILEYYLEKLRSKTQKDSEKTETTPIALVLSPTRELAHQLAKHIGEVVSHAPGVNARIALLTGGLS-LQKQQRVLTNADIVIGTPGRVWEVLSS 333
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: CSHA_BACLD (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=cshA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11 Identity = 45/136 (33.09%), Postives = 73/136 (53.68%), Query Frame = 2 Query: 362 TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMG--KHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 TF+D LS +L K + M F++ + IQA ++P+ L +++I QA+ G+GKT F + ++ +++P QA+ I PTRELAIQ E L K+G K + + K P +++GTPG + Sbjct: 4 TFQDFQLSSDLTKAIK-RMGFEEATPIQAQTIPLGLAN--KDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNP----HIIVGTPGRL 132 The following BLAST results are available for this feature:
BLAST of CB290556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290556 ID=CB290556; Name=CB290556; organism=Citrus sinensis; type=EST; length=781bpback to top |