CB290556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_ASPOR (ATP-dependent RNA helicase dbp5 OS=Aspergillus oryzae GN=dbp5 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.608e-24 Identity = 65/147 (44.22%), Postives = 93/147 (63.27%), Query Frame = 2 Query: 338 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL----KAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 + P S +FEDL L P +L+GL M F+KPSKIQ +LP++L P +NL+ Q+++G+GKT FVL LSR+D + K PQAL + PTRELA Q + V++ MG+ G+ AVP D+ S+ + + VV+GTPGT+ Sbjct: 71 NNPLYSVKSFEDLGLDPRILQGLSA-MNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRLDLSTEQAQKTPQALILAPTRELARQIVGVIQCMGQFLDGLNVSTAVPADTN-----SRHSKIESSVVVGTPGTV 211
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_MAGGR (ATP-dependent RNA helicase DBP5 OS=Magnaporthe grisea GN=DBP5 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.679e-24 Identity = 65/144 (45.14%), Postives = 97/144 (67.36%), Query Frame = 2 Query: 338 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL-KAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 D+P +S ++F +L L ++ GL + M F+KPSKIQA +LP++L+ P RN+IAQ+++G+GKT FV+ +LSRVD N PQAL + P+RELA Q V++ +G+ TG+ + A+P IS+ V A VV+GTPGT+ Sbjct: 89 DSPLSSISSFSELGLPQGIIDGL-LAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQFCTGLVVDAAIPG------AISRETGVKANVVVGTPGTV 225
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_ASPTN (ATP-dependent RNA helicase dbp5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dbp5 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.112e-24 Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 2 Query: 338 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL----KAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPP-VTAQVVIGTPGTI 763 + P S FEDL L P +L+GL M F+KPSKIQ +LP++L+ P +NL+ Q+++G+GKT FVL +LSR+D + K PQAL + PTRELA Q + V++ MG+ + AVP D+ N RP + A VV+GTPGT+ Sbjct: 71 NNPLFSVKNFEDLGLDPRILQGLSA-MNFRKPSKIQERALPLLLSNPPKNLVGQSQSGTGKTAAFVLNILSRLDLSTEQMQKTPQALILAPTRELARQIVGVIQVMGQFLDNLIIGTAVPADTNN------RPARMEASVVVGTPGTV 211
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_YEAST (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae GN=DHH1 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.982e-24 Identity = 63/144 (43.75%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T TFED L ELL G++ E F+KPS IQ ++P+ +T R+++A+A+NG+GKT FV+ L +V P L QAL + PTRELA+Q +V+R +GKH GI+ C V T TN R T +++GTPG + Sbjct: 37 TDDVLNTKGNTFEDFYLKRELLMGIF-EAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDILRLNETVHILVGTPGRV 175
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_YEAS7 (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DHH1 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.982e-24 Identity = 63/144 (43.75%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T TFED L ELL G++ E F+KPS IQ ++P+ +T R+++A+A+NG+GKT FV+ L +V P L QAL + PTRELA+Q +V+R +GKH GI+ C V T TN R T +++GTPG + Sbjct: 37 TDDVLNTKGNTFEDFYLKRELLMGIF-EAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDILRLNETVHILVGTPGRV 175
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_EMENI (ATP-dependent RNA helicase dbp5 OS=Emericella nidulans GN=dbp5 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.042e-23 Identity = 68/147 (46.26%), Postives = 93/147 (63.27%), Query Frame = 2 Query: 338 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPN----LKAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 + P S FEDL L P +L+GL M F+KPSKIQ +LP+++ P +NL+ Q+++G+GKT FVL +LSR+D + K PQAL + PTRELA Q + V++ MGK G+ AVP D TN P + A VV+GTPGT+ Sbjct: 62 NNPLYSVKNFEDLGLDPRILQGLSA-MNFRKPSKIQERALPLLMGNPPKNLVGQSQSGTGKTAAFVLNILSRLDLSSEQAQKTPQALILAPTRELARQIVGVIQVMGKFLDGLHIGTAVPAD-TNARPTR----MEASVVVGTPGTV 202
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DDX19_DROME (DEAD-box helicase Dbp80 OS=Drosophila melanogaster GN=Dbp80 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.362e-23 Identity = 77/208 (37.02%), Postives = 108/208 (51.92%), Query Frame = 2 Query: 209 ANTSEDKSTAELDVEGLTIDESKKVNKFLDEAEDSS----IKTVTTG---------------DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKW 772 A SED+ ++L V+ L +D D A+ + IK + G ++P S TFE L+L LLKG+Y M F PSKIQ +LP +L P +N+IAQ+++G+GKT FVL MLSRV+ L PQ LC+ PT ELAIQ EV +MG+ I AV + + + + ++IGTPG + W Sbjct: 5 AKKSEDQEVSKL-VDKLNLDSKSGEETDFDVADPAETSLLIKILGKGLVNTKLSLDLQQKNPNSPLHSVKTFEALHLKASLLKGIYA-MGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEE-----VDRSKKIEEHILIGTPGKLLDW 205
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_SCLS1 (ATP-dependent RNA helicase dbp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp5 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.362e-23 Identity = 62/143 (43.36%), Postives = 91/143 (63.64%), Query Frame = 2 Query: 341 TPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVD-PNLKAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 +P S TFE L + +LKGLY M F+KPSKIQ +LP++L P N+IAQ+++G+GKT FV+ +LSR+D PQALC+ P+RELA Q V+R +G+ G++ + A+P + + V A V++GTPGT+ Sbjct: 63 SPLYSVDTFEQLGIDASILKGLYA-MNFKKPSKIQEKALPLLLGNPPTNMIAQSQSGTGKTAAFVITILSRLDFSKPTTPQALCLAPSRELARQIEGVVRSIGQFVEGLSVQAAIPG------AVERNARVNAMVIVGTPGTV 198
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_ASPCL (ATP-dependent RNA helicase dbp5 OS=Aspergillus clavatus GN=dbp5 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.033e-23 Identity = 67/148 (45.27%), Postives = 90/148 (60.81%), Query Frame = 2 Query: 338 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL----KAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPP-VTAQVVIGTPGTI 763 + P S FEDL L P +LKGL M F+KPSKIQ +LP++L P +NL+ Q+++G+GKT FVL LSRVD + K PQAL + PTRELA Q + V+ MG+ G+ AVP D I+ RP + + +GTPGT+ Sbjct: 70 NNPLYSVKNFEDLGLDPRILKGLSA-MNFRKPSKIQERALPLLLGNPPKNLVGQSQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQIVGVVSVMGQFLDGLIIGTAVPAD------INNRPKRLECSIAVGTPGTV 210
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_ASPNC (ATP-dependent RNA helicase dbp5 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp5 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.961e-23 Identity = 64/147 (43.54%), Postives = 92/147 (62.59%), Query Frame = 2 Query: 338 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPN----LKAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 + P S FEDL L P +L+GL M F+KPSKIQ +LP++L P +NL+ Q+++G+GKT FVL +LSR+D + K PQAL + PTRELA Q + V++ MG+ G+ AVP D+ ++ + VV+GTPGT+ Sbjct: 67 NNPLFSVKNFEDLGLDPRILQGLSA-MNFRKPSKIQERALPLLLGNPAKNLVGQSQSGTGKTAAFVLNILSRLDLSSEQLQKTPQALILAPTRELARQIVGVIQVMGQFLDGLVIGTAVPADTG-----ARPAKMECSVVVGTPGTV 207 The following BLAST results are available for this feature:
BLAST of CB290556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290556 ID=CB290556; Name=CB290556; organism=Citrus sinensis; type=EST; length=781bpback to top |