CB290556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_PICST (ATP-dependent RNA helicase DHH1 OS=Pichia stipitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.174e-23 Identity = 62/144 (43.06%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T +FED NL ELL G++ E F+KPS IQ S+PM L R+++A+A+NG+GKT F++ L ++ P L QAL + PTRELA+Q +V+R +GKH GI +C V T T+ R V++GTPG + Sbjct: 21 TEDVLNTKGKSFEDFNLKRELLMGIF-EAGFEKPSPIQEESIPMALAG--RDVLARAKNGTGKTASFIIPSLQQIKPKLNKIQALILVPTRELALQTSQVVRTLGKHLGI--QCMVTTGGTSLKDDILRLNDPVHVLVGTPGRV 159
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_CANGA (ATP-dependent RNA helicase DHH1 OS=Candida glabrata GN=DHH1 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.174e-23 Identity = 60/144 (41.67%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T +FED L ELL G++ E F+KPS IQ ++P+ +T R+++A+A+NG+GKT FV+ L ++ P L QAL + PTRELA+Q +V+R +G+H G++ C V T TN R T V++GTPG + Sbjct: 22 TDDVLNTKGNSFEDFYLKRELLMGIF-EAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTAAFVIPTLEKIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHCGVS--CMVTTGGTNLRDDILRLNETVHVLVGTPGRV 160
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_GIBZE (ATP-dependent RNA helicase DBP5 OS=Gibberella zeae GN=DBP5 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.174e-23 Identity = 63/144 (43.75%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 341 TPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVD-PNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVP--ISKRPPVTAQVVIGTPGTI 763 TP+ SATT++DL L +LLKGL + + F KPSK+Q SLP++L+ P RN++AQ+++G+GKT FV +LSRVD PQAL + P+RELA Q V+ +G+ A +P + + PV A V++GTPGT+ Sbjct: 69 TPFHSATTWQDLGLREDLLKGL-LSLNFLKPSKVQGKSLPLMLSDPPRNMLAQSQSGTGKTAAFVTAILSRVDFSKPDQPQALALAPSRELARQIEGVINAIGRFVENKKVAAA-------IPGVLPRGEPVRASVIVGTPGTV 204
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_CANAL (ATP-dependent RNA helicase DHH1 OS=Candida albicans GN=DHH1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.505e-22 Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T +FED NL ELL G++ E F+KPS IQ S+PM L R+++A+A+NG+GKT F++ L V P L QAL + PTRELA+Q +V+R +GKH G ++C V T T+ R +++GTPG + Sbjct: 21 TEDVLNTKGKSFEDFNLKRELLMGIF-EAGFEKPSPIQEESIPMALAG--RDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVG--TQCMVTTGGTSLRDDIVRLHDPVHILVGTPGRV 159
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_AJECN (ATP-dependent RNA helicase DBP5 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP5 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.505e-22 Identity = 63/146 (43.15%), Postives = 95/146 (65.07%), Query Frame = 2 Query: 338 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVD--PNLK-APQALCICPTRELAIQNLEVLRKMGKHTG-ITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 + P S +FE+L L P +L+GL+ M F++PSKIQ +LP++L P N+I Q+++G+GKT FVL +LSR+D P ++ APQAL + P+RELA Q + V++ MG + + AVP +S ++ V A VV+GTPGT+ Sbjct: 82 NNPLYSIKSFEELGLHPSILQGLH-SMSFRRPSKIQEKALPLLLNNPPANMIGQSQSGTGKTAAFVLNILSRLDLSPQMELAPQALVLAPSRELARQIVGVIQVMGSYVDKLKVATAVPMES------NRNQKVEAPVVVGTPGTV 220
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DBP5_CHAGB (ATP-dependent RNA helicase DBP5 OS=Chaetomium globosum GN=DBP5 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.568e-22 Identity = 75/195 (38.46%), Postives = 110/195 (56.41%), Query Frame = 2 Query: 206 TANTSEDKSTAELDVEGL-------TIDESKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVD-PNLKAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 TA T E T E +G+ T D K++ +A+D S+ Y+ +FE+L L+ + GL + M F+KPSKIQ +LP++L+ P RN+IAQ+++G+GKT FVL +LSRVD PQAL + P+RELA Q V++ +G+ + E A+P IS+ V A VV+GTPGT+ Sbjct: 24 TATTGEGNGTEEPVDDGVNKGLVETTYDVEVKLSGL--QADDESLL--------YSGVASFEELGLAKSINDGL-LAMNFKKPSKIQEKALPLMLSNPPRNMIAQSQSGTGKTAAFVLTVLSRVDLTKPTQPQALLLAPSRELARQIQSVIQTIGQFCENLNVEAAIPGS------ISRETGVRANVVVGTPGTV 201
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_VANPO (ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.720e-22 Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T TFED L ELL G++ E F+KPS IQ S+P+ L R+++A+A+NG+GKT FV+ L +V QAL + PTRELA+Q +V+R +GKH GI+ C V T TN R T +++GTPG + Sbjct: 25 TEDVLSTKGNTFEDFYLKRELLMGIF-EAGFEKPSPIQEESIPVALAG--RDILARAKNGTGKTAAFVIPTLEKVKSKHNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDILRLNETVHILVGTPGRV 163
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.757e-22 Identity = 59/144 (40.97%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T +FED L ELL G++ E F+KPS IQ ++P+ + ++++A+A+NG+GKT FV+ L +V P L QAL + PTRELA+Q +V+R +GKH GI+ C V T TN R +++GTPG + Sbjct: 27 TDDVLNTKGRSFEDFYLKRELLMGIF-EAGFEKPSPIQEEAIPVAIAG--KDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDIMRLNEPVHILVGTPGRV 165
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_ASHGO (ATP-dependent RNA helicase DHH1 OS=Ashbya gossypii GN=DHH1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.274e-21 Identity = 61/144 (42.36%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T TFED L ELL G++ E F++PS IQ ++P+ L R+++A+A+NG+GKT FV+ L V P + QAL + PTRELA+Q +V+R +GKH GI+ C V T TN R V++GTPG + Sbjct: 20 TDDVLNTKGNTFEDFYLRRELLMGIF-EAGFERPSPIQEEAIPIALAR--RDILARAKNGTGKTAAFVIPTLEIVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDIMRLNEPVHVLVGTPGRV 158
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_DEBHA (ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii GN=DHH1 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.664e-21 Identity = 60/144 (41.67%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T TFED L ELL G++ E F+KPS +Q S+PM L R+++A+A+NG+GKT FV+ L + P + QAL + PTRELA+Q +V+R +GKH G+ +C V T T+ R V++GTPG + Sbjct: 21 TEDVLNTKGKTFEDFPLKRELLMGIF-EAGFEKPSPVQEESIPMALAG--RDILARAKNGTGKTASFVIPCLQQARPKVNKIQALILVPTRELALQTSQVVRTLGKHLGL--QCMVTTGGTSLRDDILRLNDPVHVLVGTPGRV 159 The following BLAST results are available for this feature:
BLAST of CB290556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290556 ID=CB290556; Name=CB290556; organism=Citrus sinensis; type=EST; length=781bpback to top |