CB290556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_ASPOR (ATP-dependent RNA helicase dhh1 OS=Aspergillus oryzae GN=dhh1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.133e-20 Identity = 56/144 (38.89%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T FED + EL+ G++ E F+KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L R++P QAL + PTRELA+Q V + +GKH GI V T T + R +++GTPG + Sbjct: 38 TEDVTATKGLEFEDFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLGI--NVMVTTGGTGLMDDIIRLNDAVHILVGTPGRV 176
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_ASPNC (ATP-dependent RNA helicase dhh1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dhh1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.133e-20 Identity = 56/144 (38.89%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T FED + EL+ G++ E F+KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L R++P QAL + PTRELA+Q V + +GKH GI V T T + R +++GTPG + Sbjct: 38 TEDVTATKGLEFEDFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLGI--NVMVTTGGTGLMDDIIRLNDAVHILVGTPGRV 176
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_GIBZE (ATP-dependent RNA helicase DHH1 OS=Gibberella zeae GN=DHH1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.193e-19 Identity = 58/144 (40.28%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T FE+ L +LL G++ E F+KPS IQ S+P+ LT R+++A+A+NG+GKT FV+ L R++P + Q L + PTRELA+Q +V + +GKH GI V T T R +V+GTPG I Sbjct: 33 TEDVTNTKGLEFENFALKRDLLMGIF-EAGFEKPSPIQEESIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKISKIQCLILVPTRELAMQTSQVCKTLGKHLGI--NVMVTTGGTGLRDDIIRLQDPVHIVVGTPGRI 171
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: RH12_ARATH (DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana GN=RH12 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.470e-19 Identity = 56/144 (38.89%), Postives = 84/144 (58.33%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T FED L +LLKG+Y E F+KPS IQ S+P+ LT +++A+A+NG+GKT F + +L ++DPN QA+ + PTRELA+Q +V +++ K+ I + V T T+ R +++GTPG I Sbjct: 115 TADVTATKGNEFEDYFLKRDLLKGIY-EKGFEKPSPIQEESIPIALTGS--DILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNI--QVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRI 253
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_CHAGB (ATP-dependent RNA helicase DHH1 OS=Chaetomium globosum GN=DHH1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.470e-19 Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 338 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 D T FED L +LL G++ E F+KPS IQ S+P+ L R+++A+A+NG+GKT FV+ L +++P + Q L + PTRELA+Q +V + +GKH GI V T T R +V+GTPG I Sbjct: 4 DVTNTKGLDFEDFGLKRDLLMGIF-EAGFEKPSPIQEESIPVALVG--RDILARAKNGTGKTAAFVIPALEKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGI--NVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRI 140
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_SCHPO (Putative ATP-dependent RNA helicase ste13 OS=Schizosaccharomyces pombe GN=ste13 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.532e-19 Identity = 57/144 (39.58%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T T FED L ELL G++ E F++PS IQ S+P+ L+ R+++A+A+NG+GKT FV+ L +VD Q L + PTRELA+Q +V + +GKH + + V T T R T +V+GTPG + Sbjct: 35 TEDVTKTRGTEFEDYYLKRELLMGIF-EAGFERPSPIQEESIPIALSG--RDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNV--KVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRV 173
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_PICGU (ATP-dependent RNA helicase DHH1 OS=Pichia guilliermondii GN=DHH1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.532e-19 Identity = 55/144 (38.19%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T +FE+ L ELL G++ E F+KPS IQ S+PM L R+++A+A+NG+GKT F++ L +V L Q L + PTRELA+Q +V++ +GKH + +C V T T R +++GTPG + Sbjct: 20 TEDVTKTQGKSFEEFGLKRELLMGIF-EAGFEKPSPIQEESIPMALAG--RDILARAKNGTGKTASFIIPALQQVKTKLNKIQVLILVPTRELALQTSQVVKTLGKH--LKLQCMVTTGGTLLRDDVMRLDEPVHILVGTPGRV 158
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DHH1_MAGGR (ATP-dependent RNA helicase DHH1 OS=Magnaporthe grisea GN=DHH1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.532e-19 Identity = 57/144 (39.58%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T FE+ L +LL G++ E F+KPS IQ S+P+ LT R+++A+A+NG+GKT FV+ L ++P + Q L + PTRELA+Q +V + +GKH GI V T T R +V+GTPG I Sbjct: 27 TEDVTNTKGLEFENFGLKRDLLMGIF-EAGFEKPSPIQEESIPVALTG--RDILARAKNGTGKTAAFVVPALETINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGI--NVMVTTGGTTLRDDILRLQDPVHIVVGTPGRI 165
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: RH8_ARATH (DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana GN=RH8 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.920e-19 Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T FED L ELL G+Y E F++PS IQ S+P+ LT R+++A+A+NG+GKT F + +L ++D + QA+ I PTRELA+Q +V +++GKH I + V T T+ R +++GTPG I Sbjct: 122 TEDVTATKGNEFEDYFLKRELLMGIY-EKGFERPSPIQEESIPIALTG--RDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKI--QVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 260
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: RH12_ORYSJ (DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica GN=Os10g0503700 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.938e-18 Identity = 55/144 (38.19%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 332 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T D T FED L ELL G+Y E F++PS IQ S+P+ LT +++A+A+NG+GKT F + L ++DP A Q + + PTRELA+Q +V +++GK+ I + V T T+ R +++GTPG I Sbjct: 138 TEDVTATKGNEFEDYFLKRELLMGIY-EKGFERPSPIQEESIPIALTGS--DILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCKELGKYLNI--QVMVSTGGTSLKDDIMRLYQPVHLLVGTPGRI 276 The following BLAST results are available for this feature:
BLAST of CB290556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290556 ID=CB290556; Name=CB290556; organism=Citrus sinensis; type=EST; length=781bpback to top |