CB290556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: IF4A_USTMA (ATP-dependent RNA helicase eIF4A OS=Ustilago maydis GN=TIF1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.236e-17 Identity = 53/138 (38.41%), Postives = 83/138 (60.14%), Query Frame = 2 Query: 350 TSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 T F+++ L ELL+G+Y F++PS IQA ++ ++ ++IAQA++G+GKT F + +L R+DP++KA QAL + PTRELA Q +V+ +G + I +C TN + AQVV+GTPG + Sbjct: 35 TVIDNFDNMELKEELLRGVYA-YGFERPSAIQARAIVPVIKG--HDVIAQAQSGTGKTATFSIAILQRIDPSIKAVQALILAPTRELAQQIQKVVIALGDYMKI--DCHACIGGTNVREDMAKLNEGAQVVVGTPGRV 167
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: CGH1_CAEEL (ATP-dependent RNA helicase cgh-1 OS=Caenorhabditis elegans GN=cgh-1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.236e-17 Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 2 Query: 302 AEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 A+D KT DT FED L +LL G++ E ++KPS IQ S+ + LT ++++A+A+NG+GKT + + ++ ++ P LKA QA+ I PTRELA+Q ++ ++ KH I + V T T+ R T +VI TPG I Sbjct: 27 AKDRRFKTADVTDT---KGVEFEDFCLGRDLLMGIF-EKGWEKPSPIQEASIGVALTG--QDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKH--IQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRI 172
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.234e-16 Identity = 57/158 (36.08%), Postives = 89/158 (56.33%), Query Frame = 2 Query: 302 AEDSSIKTVTTG--DTPYTSAT-TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIK 766 + D ++ + G ++ Y T +F+ + L PELL+G+Y F++PS IQ ++ I+ ++IAQA++G+GKT F + L ++DPN+K QAL + PTRELA Q +V+ +G I EC TN K QVV+GTPG ++ Sbjct: 3 SNDKGLEEIPEGQIESNYDEITDSFDSMELKPELLRGIYA-YGFERPSAIQQRAILPIIKG--NDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNI--ECHACIGGTNVREDMKALQEGPQVVVGTPGRVQ 155
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: IF4A_ASPNC (ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.234e-16 Identity = 58/157 (36.94%), Postives = 87/157 (55.41%), Query Frame = 2 Query: 302 AEDSSIKTVTTG--DTPYTSAT-TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 + D ++ + G +T Y T +F+ ++L PELL+G+Y F++PS IQ ++ I+ ++IAQA++G+GKT F + L ++D LKA QAL + PTRELA Q +V+ +G I EC TN QVV+GTPG I Sbjct: 3 SNDKGLEEIPEGQIETNYDEVTDSFDSMDLKPELLRGVYA-YGFERPSAIQQRAIKPIIAG--HDVIAQAQSGTGKTATFSISALQKIDQELKACQALIVAPTRELAQQIQKVVVAIGDFMNI--ECHACIGGTNVRDDMNALRAGPQVVVGTPGRI 154
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.234e-16 Identity = 55/156 (35.26%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 296 DEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 D ED +K T+ +S TFE +NL +LL+G+Y F+ PS IQ+ ++ I++ +++IAQA++G+GKT F +G+L +D K QAL + PTRELA Q +V++ +G + + + A+ T + K Q V GTPG + Sbjct: 4 DREEDQKLKFKTSKKLKVSS--TFESMNLKDDLLRGIY-SYGFEAPSSIQSRAITQIISG--KDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNA-FAITGGKTLKDDLKKMQKHGCQAVSGTPGRV 153
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.234e-16 Identity = 55/156 (35.26%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 296 DEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 D ED +K T+ +S TFE +NL +LL+G+Y F+ PS IQ+ ++ I++ +++IAQA++G+GKT F +G+L +D K QAL + PTRELA Q +V++ +G + + + A+ T + K Q V GTPG + Sbjct: 4 DREEDQKLKFKTSKKLKVSS--TFESMNLKDDLLRGIY-SYGFEAPSSIQSRAITQIISG--KDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNA-FAITGGKTLKDDLKKMQKHGCQAVSGTPGRV 153
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: IF4A_SCHPO (ATP-dependent RNA helicase eIF4A OS=Schizosaccharomyces pombe GN=tif1 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.612e-16 Identity = 59/158 (37.34%), Postives = 88/158 (55.70%), Query Frame = 2 Query: 293 LDEAEDSSIKTVTTGDTPYTSAT-TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 +D+ EDS I +T Y TF+D+NL PELL+G+Y F++PS IQ ++ IL R+++AQA++G+GKT F + +L ++D +LK QAL + PTRELA Q +V+ +G + EC T VV+GTPG + Sbjct: 2 VDQLEDSVI------ETNYDEVIDTFDDMNLKPELLRGIYA-YGFERPSAIQQRAIMPILGE--RDVLAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNV--ECHACIGGTLVRDDMAALQAGVHVVVGTPGRV 148
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: FAL1_LODEL (ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus GN=FAL1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.612e-16 Identity = 54/134 (40.30%), Postives = 77/134 (57.46%), Query Frame = 2 Query: 362 TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTI 763 TFE + L PELLKG+Y F+ PS IQ+ ++ I++ R+ IAQA++G+GKT F +GML +D K QAL + PTRELA Q V++ +G + I + + N KR Q+V GTPG + Sbjct: 27 TFESMRLKPELLKGIYA-YGFEAPSAIQSRAIMQIISG--RDTIAQAQSGTGKTATFSIGMLEVLDSKSKECQALVLSPTRELATQIQNVIKHLGDYMNIQTYACI--GGKNVGTDIKRLQQGQQIVSGTPGRV 155
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.105e-16 Identity = 57/158 (36.08%), Postives = 90/158 (56.96%), Query Frame = 2 Query: 302 AEDSSIKTVTTG--DTPYTSAT-TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIK 766 + D ++ + G ++ Y T +F+ ++L PELL+G+Y F++PS IQ ++ I+ ++IAQA++G+GKT F + L ++DPN+K QAL + PTRELA Q +V+ +G I EC TN K QVV+GTPG ++ Sbjct: 3 SNDKGLEEIPEGQIESNYDEITDSFDAMDLKPELLRGVYA-YGFERPSAIQQRAILPIIKG--NDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNI--ECHACIGGTNVREDMKALQEGPQVVVGTPGRVQ 155
BLAST of CB290556 vs. ExPASy Swiss-Prot
Match: DEAD_KLEPN (Cold-shock DEAD box protein A OS=Klebsiella pneumoniae GN=deaD PE=3 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 2.105e-16 Identity = 52/137 (37.96%), Postives = 80/137 (58.39%), Query Frame = 2 Query: 359 TTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPIS--KRPPVTAQVVIGTPGTI 763 TTF DL L +L+ L ++ ++KPS IQA +P +L R+++ A+ GSGKT F L +L+ +DP L+APQ L + PTRELA+Q E + + KH + A+ V + ++ P Q+V+GTPG + Sbjct: 6 TTFADLGLKAPILEAL-TDLGYEKPSPIQAECIPHLLDG--RDVLGMAQTGSGKTAAFSLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALRQGP---QIVVGTPGRL 136 The following BLAST results are available for this feature:
BLAST of CB290556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290556 ID=CB290556; Name=CB290556; organism=Citrus sinensis; type=EST; length=781bpback to top |