CB290567

Overview
NameCB290567
Unique NameCB290567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290567 vs. ExPASy Swiss-Prot
Match: LST2_DROWI (Lateral signaling target protein 2 homolog OS=Drosophila willistoni GN=GK22512 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.311e-11
Identity = 40/129 (31.01%), Postives = 57/129 (44.19%), Query Frame = -2
Query:  445 RLQSNSYTATTLLDIVTAATVQLKEMGGGRSRSSDSLKTAEQTGE--QKKGFADWMNLMKPGNEEKDHWVPDEAVSKCTACGTDFSAFVRKHHCRNCGDIFCDKCTHGRIALTADANAQPVRVCDRCMA 825
            R ++NS  + T     ++AT    E     S  S + +   Q+    Q    A        G      W+PD    +C +C T F+AF R+HHCRNCG +FC  C++    L      + VRVC  C A
Sbjct:  834 RQRNNSVGSNTPSSASSSATSSSSEQNSPVSMRSGTGRRRHQSNNETQMPTTATTTTTTGTGTLAPPAWIPDGKAPRCMSCQTPFTAFRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCRDCYA 962          
BLAST of CB290567 vs. ExPASy Swiss-Prot
Match: YL615_MIMIV (Putative phosphatidylinositol kinase L615 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L615 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11
Identity = 35/100 (35.00%), Postives = 50/100 (50.00%), Query Frame = -2
Query:  403 NEEKDHWVPDEAVSKCTACGTDFSAFVRKHHCRNCGDIFCDKCTHGRIALTADANAQP-------------------VRVCDRCMAEVTQRLSNAKEMAN 645
            N + + WV D  VS+C  C   FS   RKHHCRNCG+IFC  C +  I +    N +P                    RVCD C  +V ++ +N++++AN
Sbjct:   27 NNKNNVWVDDVMVSRCYNCKKKFSMLRRKHHCRNCGNIFCYNCANKFIVIPNFINDRPEPADYWNISYYITSLKDEAERVCDNCYYKVKEKTANSEKIAN 126          
BLAST of CB290567 vs. ExPASy Swiss-Prot
Match: MTMR4_XENLA (Myotubularin-related protein 4 OS=Xenopus laevis GN=mtmr4 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11
Identity = 36/112 (32.14%), Postives = 53/112 (47.32%), Query Frame = -2
Query:  400 SRSSDSLKTAEQTGEQKKGFADWMNLMKPGNEEKDHWVPDEAVSKCTACGTDFSAFVRKHHCRNCGDIFCDKCTHGRIALTADANAQPVRVCDRCMAEVTQRLSNAKEMANK 735
            S  SD         E +   A W  + K    E   WVPD   S C  C  +F    R+HHCRNCG++FC  C H ++ +       PV VC+ C   +  ++S A+E+ ++
Sbjct:  959 SDGSDMDDLYSDKSEDRLSEASWEPVDKK-ETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCAACCHLKLPIPDQQLYDPVLVCNTCYDHI--QVSRARELMSQ 1067          
BLAST of CB290567 vs. ExPASy Swiss-Prot
Match: ZFYV1_PONAB (Zinc finger FYVE domain-containing protein 1 OS=Pongo abelii GN=ZFYVE1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 42/129 (32.56%), Postives = 57/129 (44.19%), Query Frame = -2
Query:  451 PRRIRLQSNSYTATTLLDIVTAATVQLKEMGGGRSRSSDSLKTAEQTGEQKKGFADWMNLMKPGNEEKDHWVPDEAVSKCTACGTDFSAFVRKHHCRNCGDIFCDKCTHGRIALTADANAQPVRVCDRC 837
            P  +R+  N Y A  +   VT A  Q+ + GG               G         + L+K       +WVPD  +  C  C  +FS  + KHHCR CG  FCD+C+H R A+ +     PVRVC  C
Sbjct:  645 PAPVRVCDNCYEARNVQLAVTEA--QVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPA-YWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNC 770          
BLAST of CB290567 vs. ExPASy Swiss-Prot
Match: ZFYV1_HUMAN (Zinc finger FYVE domain-containing protein 1 OS=Homo sapiens GN=ZFYVE1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 42/129 (32.56%), Postives = 57/129 (44.19%), Query Frame = -2
Query:  451 PRRIRLQSNSYTATTLLDIVTAATVQLKEMGGGRSRSSDSLKTAEQTGEQKKGFADWMNLMKPGNEEKDHWVPDEAVSKCTACGTDFSAFVRKHHCRNCGDIFCDKCTHGRIALTADANAQPVRVCDRC 837
            P  +R+  N Y A  +   VT A  Q+ + GG               G         + L+K       +WVPD  +  C  C  +FS  + KHHCR CG  FCD+C+H R A+ +     PVRVC  C
Sbjct:  645 PAPVRVCDNCYEARNVQLAVTEA--QVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPA-YWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNC 770          
BLAST of CB290567 vs. ExPASy Swiss-Prot
Match: PKHF1_HUMAN (Pleckstrin homology domain-containing family F member 1 OS=Homo sapiens GN=PLEKHF1 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 40/101 (39.60%), Postives = 52/101 (51.49%), Query Frame = -2
Query:  361 PGNEEKDHWVPDEAVSKCTACG-TDFSAFVRKHHCRNCGDIFCDKCTHGRIALTADANAQPVRVCDRCMAEVT--QRLSNAKEM-ANKPALQSHEDLARKL 651
            P  E    W+PD+A   C  C  T FSA  R+HHCR CG + C +C+  R  L    + +PVRVC  C  E+   QR   A+E  A  P   +H  LAR +
Sbjct:  141 PSTEHAAPWIPDKATDICMRCTQTRFSALTRRHHCRKCGFVVCAECSRQRFLLPR-LSPKPVRVCSLCYRELAAQQRQEEAEEQGAGSPGQPAH--LARPI 238          
BLAST of CB290567 vs. ExPASy Swiss-Prot
Match: MTMR4_MOUSE (Myotubularin-related protein 4 OS=Mus musculus GN=Mtmr4 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11
Identity = 36/112 (32.14%), Postives = 53/112 (47.32%), Query Frame = -2
Query:  400 SRSSDSLKTAEQTGEQKKGFADWMNLMKPGNEEKDHWVPDEAVSKCTACGTDFSAFVRKHHCRNCGDIFCDKCTHGRIALTADANAQPVRVCDRCMAEVTQRLSNAKEMANK 735
            S  SD+        E     A W  + K    E   WVPD   S C  C  +F    R+HHCRNCG++FC  C H ++ +       PV VC+ C   +  ++S A+E+ ++
Sbjct: 1071 SDGSDTEDFGSDHSEDCLSEASWEPVDKK-ETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCYEHI--QVSRARELMSQ 1179          
BLAST of CB290567 vs. ExPASy Swiss-Prot
Match: MTMR4_HUMAN (Myotubularin-related protein 4 OS=Homo sapiens GN=MTMR4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11
Identity = 36/112 (32.14%), Postives = 53/112 (47.32%), Query Frame = -2
Query:  400 SRSSDSLKTAEQTGEQKKGFADWMNLMKPGNEEKDHWVPDEAVSKCTACGTDFSAFVRKHHCRNCGDIFCDKCTHGRIALTADANAQPVRVCDRCMAEVTQRLSNAKEMANK 735
            S  SD+        E     A W  + K    E   WVPD   S C  C  +F    R+HHCRNCG++FC  C H ++ +       PV VC+ C   +  ++S A+E+ ++
Sbjct: 1076 SDGSDTEDFGSDHSEDCLSEASWEPVDKK-ETEVTRWVPDHMASHCYNCDCEFWLAKRRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCYEHI--QVSRARELMSQ 1184          
BLAST of CB290567 vs. ExPASy Swiss-Prot
Match: LST2_DROMO (Lateral signaling target protein 2 homolog OS=Drosophila mojavensis GN=GI24295 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11
Identity = 30/87 (34.48%), Postives = 49/87 (56.32%), Query Frame = -2
Query:  367 WVPDEAVSKCTACGTDFSAFVRKHHCRNCGDIFCDKCTHGRIALTADANAQPVRVCDRCMAEVTQRLSNAKEMANKPALQSHEDLAR 627
            W+PD    +C +C T F+AF R+HHCRNCG +FC  C++    L      + VRVC  C     + + ++++   +P+ Q+H   +R
Sbjct:  962 WIPDGKAPRCMSCQTPFTAFRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCREC---YVREVRSSRQAPAQPS-QAHGQASR 1044          
BLAST of CB290567 vs. ExPASy Swiss-Prot
Match: LST2_DROYA (Lateral signaling target protein 2 homolog OS=Drosophila yakuba GN=GE10583 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.723e-11
Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = -2
Query:  451 WVPDEAVSKCTACGTDFSAFVRKHHCRNCGDIFCDKCTHGRIALTADANAQPVRVCDRC 627
            W+PD    +C AC T F+AF R+HHCRNCG +FC  C++    L      + VRVC  C
Sbjct:  901 WIPDGKAPRCMACQTPFTAFRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCRDC 959          
The following BLAST results are available for this feature:
BLAST of CB290567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
LST2_DROWI2.311e-1131.01Lateral signaling target protein 2 homolog OS=Dros... [more]
YL615_MIMIV3.018e-1135.00Putative phosphatidylinositol kinase L615 OS=Acant... [more]
MTMR4_XENLA3.018e-1132.14Myotubularin-related protein 4 OS=Xenopus laevis G... [more]
ZFYV1_PONAB3.941e-1132.56Zinc finger FYVE domain-containing protein 1 OS=Po... [more]
ZFYV1_HUMAN3.941e-1132.56Zinc finger FYVE domain-containing protein 1 OS=Ho... [more]
PKHF1_HUMAN3.941e-1139.60Pleckstrin homology domain-containing family F mem... [more]
MTMR4_MOUSE5.148e-1132.14Myotubularin-related protein 4 OS=Mus musculus GN=... [more]
MTMR4_HUMAN5.148e-1132.14Myotubularin-related protein 4 OS=Homo sapiens GN=... [more]
LST2_DROMO5.148e-1134.48Lateral signaling target protein 2 homolog OS=Dros... [more]
LST2_DROYA6.723e-1145.76Lateral signaling target protein 2 homolog OS=Dros... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cc07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cc07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290567 ID=CB290567; Name=CB290567; organism=Citrus sinensis; type=EST; length=844bp
TTTTTTTTTTTTTTTTTAAAGGTAATCATAAAGTCAATAGAATTCACTGA
ACAGACCAAGAATAGATACTATACAAACTAATCCAAATTATTAATAATCA
CAAGCTGAACAAGTAAAATAAGTTCAACCAGAATTACTATAGATAAGGCG
TTCGGTAGCCTTCACCAGTTGTAAAAATCAATGAGCACTCACAAGGAAAG
GATGCTGGCAAACTCCACACTCAATAGTCTCAGAACCTGAGCTCGGTACT
TGGACCTGCAAATGGACAGTGCAAGTGGGACAAGCAACTTCCCTCATCCG
TCTACCAGATCCATCAGACTTGGATCCTGATGATGACTTGCGATTTTTCT
CCATTTCCTGAAGCTTCCTCGCAAGATCCTCATGACTCTGTAATGCAGGT
TTATTAGCCATTTCTTTAGCATTACTTAGCCTCTGAGTCACTTCCGCCAT
GCATCGGTCACAAACTCGAACCGGCTGAGCGTTCGCATCAGCAGTAAGAG
CAATCCTTCCGTGGGTACACTTGTCACAGAAAATATCACCACAGTTCCTG
CAGTGATGCTTGCGCACAAAAGCCGAAAAATCTGTCCCGCATGCTGTACA
CTTTGAAACAGCTTCATCAGGGACCCAATGATCTTTCTCCTCGTTGCCAG
GTTTCATCAAGTTCATCCAATCAGCAAAGCCTTTCTTCTGCTCCCCAGTC
TGTTCGGCTGTCTTCAAGGAATCAGAAGACCTGCTCCTTCCACCACCCAT
CTCCTTCAACTGTACAGTAGCAGCTGTCACTATGTCCAATAGGGTGGTGG
CAGTGTAACTATTTGATTGTAATCTAATACGTCTTGGTTCAATG
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