CB290579

Overview
NameCB290579
Unique NameCB290579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290579 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.506e-33
Identity = 75/205 (36.59%), Postives = 118/205 (57.56%), Query Frame = -3
Query:  290 VKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGV 901
            VK+QG CG+CW+F+T G+LE    +   +L++LSEQQ +DCD           ++GC+GGL+++AFE  ++ GG+  E DYPY  T  G  C+ + ++    V +    + + E+++   L   GP+ VAI+A  +  Y  G+      +  L+H VLLVGY             PYWI+KN+WG  WGE+GY+++ +  N CG+
Sbjct:  128 VKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFESAMEMGGVQMESDYPYE-TANGQ-CRINPNRFVVGVRSCRRYIVMFEEKLKDLLRAVGPIPVAIDASDIVNYRRGI-MRQCANHGLNHAVLLVGYAVE-------NNIPYWILKNTWGTDWGEDGYFRVQQNINACGI 313          
BLAST of CB290579 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.766e-32
Identity = 85/217 (39.17%), Postives = 118/217 (54.38%), Query Frame = -3
Query:  275 PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG-RNVCGVDSMVS 904
            PVKDQG CGSCW+F +TG+LEG N +  G+LVSLSEQQLVDC         GS   GC GG  +SAF+Y ++ G L  E +YPY     G       +    S+  + +V S  E  +   +   GP+A+AI+A     + Y+ GV     C      LDH VL +GYG+        + + Y+++KNSW  +WG +GY  + R   N+CGV S  +
Sbjct:  323 PVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDC-----AILTGS--QGCGGGFASSAFQYVMEIGSLATESNYPYL-MQNGLCRDRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNPACKNGLDDLDHEVLAIGYGT-------YQGQDYFLVKNSWSTNWGMDGYVYMARNDNNLCGVSSQAT 524          
BLAST of CB290579 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.612e-32
Identity = 80/216 (37.04%), Postives = 110/216 (50.93%), Query Frame = -3
Query:  281 EGRCRPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR-NVCGVDSM 919
            EG    V+ QG C SCW+F  TGA+EG  F  TGKL+ LS Q L+DC            + GC  G   +AF+Y L  GGL  E  YPY   +    C+++    +A +  F V+   ED +   +   GP+A  ++ +    + Y  GV     CS  ++H VL+VGYG  G          YW+IKNSWG+ WG  GY KI + R N C + S+
Sbjct:  134 EGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKP-------QGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKE--GVCRYNPKNSSAKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVLVVGYGFEGN---ETDGNNYWLIKNSWGKRWGLRGYMKIAKDRNNHCAIASL 337          
BLAST of CB290579 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.162e-32
Identity = 81/218 (37.16%), Postives = 115/218 (52.75%), Query Frame = -3
Query:  275 EGRCRPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF-DKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR-NVCGVDSMVS 919
            +G   PV++QG CGSCW+ ST  A+E  + + +G  V LS QQLVDC            + GCNGG   + FEY +K  GL  + DYPY+G +    CK  DKS+    +  +  V+  E  +   +   GP++  +    M++Y GG+     C    L HGV +VGYG           + YWIIKN+WG  WGE+GY ++ R   + CGV+ M S
Sbjct:  119 KGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYG-------NHGCNGGFAVNGFEY-VKDNGLESDADYPYSGKE--DKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISAVVFGKPMKSYGGGIFDDSSCLGDNLHHGVNVVGYGIE-------NGQKYWIIKNTWGADWGESGYIRLIRDTDHSCGVEKMAS 319          
BLAST of CB290579 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 8.047e-32
Identity = 76/216 (35.19%), Postives = 117/216 (54.17%), Query Frame = -3
Query:  290 EGRCRPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG----RNVCGV 919
            EG    VKDQG C SCW+FST GA+EG N + TG+LV+LSEQ L++C+ E         ++GC GG + +A+E+ +K GGL  + DYPY   +     +  ++     +  +  +  +++      V + P+   I++     Q Y  GV     C   L+HGV++VGYG+          + YW++KNS G +WGE GY K+ R     R +CG+
Sbjct:  146 EGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCDGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGV-FDGSCGTNLNHGVVVVGYGTE-------NGRDYWLVKNSRGITWGEAGYMKMARNIANPRGLCGI 344          
BLAST of CB290579 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.051e-31
Identity = 76/215 (35.35%), Postives = 112/215 (52.09%), Query Frame = -3
Query:  275 VKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR---GRNVCGVDSMVS 901
            +K QG CG CW+FS    +EG N + TG L+SLSEQ+L+DC    +         GCNGG +   F++ +  GG+  EE+YPYT  D    C  D +++   ++  +  V  + +      V   P++VA++A     + Y  G+     C   +DH V +VGYG+ G          YWI+KNSW  +WGE GY +I R   G   CG+ +M S
Sbjct:  142 IKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQD--GECNLDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFTG-PCGTAIDHAVTIVGYGTEGGI-------DYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPS 339          
BLAST of CB290579 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 137.502 bits (345), Expect = 1.051e-31
Identity = 77/216 (35.65%), Postives = 113/216 (52.31%), Query Frame = -3
Query:  275 VKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA---VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR---GRNVCGVDSMVS 901
            +K QG CG CW+FS    +EG N + TG L+SLSEQ+L+DC    +         GCNGG +   F++ +  GG+  EE+YPYT  D    C  D +++   ++  +  V  + +      V   P++VA++A    + Q   G  + P  C   +DH V +VGYG+ G          YWI+KNSW  +WGE GY +I R   G   CG+ +M S
Sbjct:  142 IKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQD--GECNVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGP--CGTAVDHAVTIVGYGTEGGI-------DYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPS 339          
BLAST of CB290579 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.373e-31
Identity = 75/216 (34.72%), Postives = 116/216 (53.70%), Query Frame = -3
Query:  290 EGRCRPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG----RNVCGV 919
            EG    VKDQG C SCW+FST GA+EG N + TG+LV+LSEQ L++C+ E         ++GC GG + +A+E+ +  GGL  + DYPY   +     +  +      +  +  +  +++      V + P+   +++     Q Y  GV     C   L+HGV++VGYG+          + YWI+KNS G++WGE GY K+ R     R +CG+
Sbjct:  153 EGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGV-FDGTCGTNLNHGVVVVGYGTE-------NGRDYWIVKNSRGDTWGEAGYMKMARNIANPRGLCGI 351          
BLAST of CB290579 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.793e-31
Identity = 68/219 (31.05%), Postives = 123/219 (56.16%), Query Frame = -3
Query:  266 REGRCRPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTIA 922
            ++ +   +K+Q +CG+CW+F+T  ++E    +     + LSEQQ++DCD+          D GC+GGL+++AFE  ++ G L++E +YPY G ++    + D++ +      +  V   E+++   L   GP+ +AI+A  +  Y  G+   Y  +  L+H VLLVGYG            P+W  KN+WG+ WGE GY+++ +  + CG+ + +++ A
Sbjct:  124 QQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY---------VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFREEKLKDLLRAVGPIPMAIDASGIVNYHHGI-IHYCENYGLNHAVLLVGYGVE-------NNVPFWTFKNTWGKDWGEEGYFRVRQNVDACGMTNELASSA 325          
BLAST of CB290579 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.375e-31
Identity = 75/205 (36.59%), Postives = 111/205 (54.15%), Query Frame = -3
Query:  311 EGRCRPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 919
            +G   PVK+QG CGSCW+F    A+EG N + TG L+SLSEQQLVDC          + + GC GG    AF+Y +  GG+  EE YPYTGT+    C   ++    S+ ++  V  ++++     V N P++V ++A     Q Y  G+     C+   +H      Y + G       +K YW +KNSWG++WGE+GY ++ R
Sbjct:   12 KGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDC---------STRNHGCEGGWPYRAFQYIINNGGINSEEHYPYTGTN--GTCDTKENAHVVSIDSYRNVPSNDEKSLQKAVANQPVSVTMDAAGRDFQLYRNGIFTG-SCNISANH------YRTVGGRETE-NDKDYWTVKNSWGKNWGESGYIRVER 197          

HSP 2 Score: 25.0238 bits (53), Expect = 2.375e-31
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = -1
Query:  895 DWRERGAVGPLK 930
            DWRE+GAV P+K
Sbjct:    8 DWREKGAVVPVK 19          
The following BLAST results are available for this feature:
BLAST of CB290579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
CATV_NPVOP9.506e-3336.59Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CFAD_DICDI2.766e-3239.17Counting factor associated protein D OS=Dictyostel... [more]
CATQ_RAT3.612e-3237.04Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATLL_PHACE6.162e-3237.16Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CPR3_ARATH8.047e-3235.19Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
ACTN_ACTDE1.051e-3135.35Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
ACTN_ACTCH1.051e-3135.65Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CPR4_ARATH1.373e-3134.72Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CATV_NPVBS1.793e-3131.05Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CPGP1_ZINOF2.375e-3136.59Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290579 ID=CB290579; Name=CB290579; organism=Citrus sinensis; type=EST; length=933bp
TTTTTTTTTTTTTTTTTCATGTCCTTGATCTGCCAAATTTATATAACGTC
AGATAACAGTCTTAATCTTACAACAAAGGAGTTCCACTTAATGACATAAT
TGAGACATTTCAGTTTGACACCCAGATGCAATAAGAAATCATTTCTTATG
CATTGAGGAAATTGTTTCAACATTAAAGTCGCATGCTTTATATACAAAAC
ATCCAATGGACCTGTATCTGCTACTATAACCTACTCCTTACTTGGAGTCA
GTCACGAACAGCAGCAGCTATGGTCGAAACCATGGAATCGACTCCACAGA
CGTTGCGACCCCTGCATATTTTGTAGTATCCGTTCTCTCCCCAGCTCTCA
CCCCATGAATTCTTGATGATCCAGTATGGCTTCTCCTTCAACCTGATTGG
AGCATAGCCAGCTGAACCGTATCCCACGAGCAACACTCCATGGTCCAATC
GCCTCGAGCATATGTATGGGCAGGAAACTCCCCCAATGTATGTCTGCATG
TACACGGCATTGATGGCCACTGCAAGGGGACCATTTTTCACAAGATTGGC
AGCAATTTGATCCTCATCAAGGGAGACAACACTGAAGTTGGCCACTGAGG
CAGCAATCTTACTCTTATCGAATTTGCAGGCGTGGCCACGATCAGTGCCG
GTGTAAGGATAGTCTTCCTCCCGCATAAGCCCACCAGCCTTGAGTGTGTA
CTCAAAAGCACTGTTCATAAGCCCACCATTGCATCCAGAATCACAAGAAC
CTGGTTCCTCAGGATCACACTCATGATCGCAATCCACAAGCTGTTGCTCA
CTGAGGCTCACAAGCTTTCCAGTTGCCAGGAAGTTAGCACCTTCCAAGGC
CCCTGTTGTACTGAAACTCCAGCATGATCCGCATGAACCCTGATCTTTAA
CGGGCCTACAGCGCCCCTCTCTCTCCAATCAAA
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