CB290580

Overview
NameCB290580
Unique NameCB290580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.918e-24
Identity = 76/225 (33.78%), Postives = 113/225 (50.22%), Query Frame = 3
Query:  201 QEEHDRRFTIFKANLRRAARRQKLDP----SATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---------LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPL 833
            Q+E++ R  IF++N     R  K       S T  +   +DLT  EF      +R  LRLP   D      T++         LP   DWR KGAV PV++QG CGSC++F+T  ALE  +   TG+L+ LS Q +VDC            ++GC+GG M +AF+Y  +  G+  E  YPY GT++   C++ +S    +   F+ +   DE  +   + K GP+
Sbjct:  104 QKENNFRMAIFESNELMTERINKKYEQGLVSYTTALNDLADLTDEEFM-----VRNGLRLPNQTDLRGKRQTSEFYRYDKSERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLG-------NNGCSGGYMPTAFQYASRY-GIAMESRYPYVGTEQ--RCRWQQSIAVVTDNGFNEIQPGDELALKHAVAKRGPV 313          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.165e-23
Identity = 74/231 (32.03%), Postives = 112/231 (48.48%), Query Frame = 3
Query:  159 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPL 833
            + L+KK ++K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+         D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  +  G+  E+ YPY G D   +C ++ +  AA    +  +   +E  +   + + GP+
Sbjct:   26 WELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE---------NYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQD--ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPV 245          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.389e-23
Identity = 75/236 (31.78%), Postives = 114/236 (48.31%), Query Frame = 3
Query:  168 FKKKFNKAYASQEEHDRRFTIFKANLRRAA---RRQKLDPSA-THGVTQFSDLTPAEFRRTYLGLRRKL-----RLPKDADQAPILPTN-----DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            +K K+ K Y+ +EE  +R  +++ N+++     R   L  +  T  +  F+D+T  EF+   +G +  +     RL K A      P +      LP   DWR +G V  V+ QG C SCW+F  TGA+EG  F  TGKL+ LS Q L+DC            + GC  G   +AF+Y L  GGL  E  YPY   +    C+++    +A +  F V+   ED +   +   GP+
Sbjct:   32 WKIKYEKLYSPEEEVLKR-VVWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRA-LGSFFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKP-------QGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKE--GVCRYNPKNSSAKITGFVVLPESEDVLMDAVATKGPI 256          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.869e-22
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 3
Query:  411 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 704
            LP   DWR+KGAV PVK+QGSCGSCW+FST   +E  N + TG L+SLSEQ+LVDCD +         + GC GG    A++Y +  GG+  + +YPY
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK---------NHGCLGGAFVFAYQYIINNGGIDTQANYPY 89          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.893e-22
Identity = 47/97 (48.45%), Postives = 60/97 (61.86%), Query Frame = 3
Query:  414 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 704
            P   DWR+KGAV PVK+Q  CGSCW+FST   +EG N + TGKL+SLSEQ+L+DCD             GC GG    + +Y    GG+  E++YPY
Sbjct:    2 PESIDWRDKGAVTPVKNQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDRR---------SHGCKGGYQTGSIQYVADNGGVHTEKEYPY 89          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.142e-21
Identity = 65/188 (34.57%), Postives = 93/188 (49.47%), Query Frame = 3
Query:  279 SATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG-GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL--DEDQIAANLVKNGPL 833
            +A +GV QFS L P EF+  YLG +        A+    +P   LP  FDWR+K  V PV++Q  CG CW+FS   A+E A  +    L  LS QQ++DC            +SGC GG    A  +  +    L+ +  YP+   + G    F +S+   SV +FS  +    ED++A  L+  GPL
Sbjct:   55 TAFYGVNQFSYLFPEEFKALYLGSKYAWAPRYPAEGQRPIPNVSLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN---------NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVN-GQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPL 232          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.228e-21
Identity = 51/140 (36.43%), Postives = 75/140 (53.57%), Query Frame = 3
Query:  414 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            P   DWREKGAV PVK+Q  CGSCW+FST   +EG N + TG+L+SLSEQ+L+DC++            GC+GG    + +Y +   G+  E +YPY    +G     DK      +  +  V  +++      + N P+
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR---------SHGCDGGYQTPSLQYVVD-NGVHTEREYPYE-KKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPV 130          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.056e-20
Identity = 70/214 (32.71%), Postives = 101/214 (47.20%), Query Frame = 3
Query:  213 DRRFTIFKANLRRAARRQKLDPS----ATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG-GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSV--VSLDEDQIAANLVKNGPL 833
            +R    F+ +L R      L PS    A +G+ QFS L P EF+  YL  +        A+    +P   LP  FDWR+K  V  V++Q  CG CW+FS  GA+E A  +    L  LS QQ++DC +          + GCNGG   +A  +  K    L+++ +YP+     G    F  S    S+  +S    S  ED++A  L+  GPL
Sbjct:   38 EREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYN---------NYGCNGGSTLNALNWLNKMQVKLVKDSEYPFK-AQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPL 241          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.064e-19
Identity = 67/208 (32.21%), Postives = 100/208 (48.08%), Query Frame = 3
Query:  183 NKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG---KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD---RGHACKFDKSKIAASVANFSVVSL 788
            N  + +  E  RR  IF  N R  A   + +         F+ +T  E+  + L L+R      +     I      P   DWR+KG V P++DQG+CGSC++F +  ALEG   +  G   + + LSE+ +V C  E         ++GCNGGL ++ + Y ++  G+ +E DYPYTG+D   R     F K K    VA  + V L
Sbjct:   23 NNKHFTAVESLRRRAIFNMNARIVAENNRKETFKLSVDGPFAAMTNEEYN-SLLKLKRSGEEKGEVRYLNI----QAPKAVDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTRE-------DGNNGCNGGLGSNVYNYIME-NGIAKESDYPYTGSDSTCRSDVKAFAKIKSYNRVARNNEVEL 217          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.128e-18
Identity = 66/222 (29.73%), Postives = 107/222 (48.20%), Query Frame = 3
Query:  159 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG---KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANL 815
            F+ +  K NK + + E+  RR  IF  N +      K+          F+ +T  E+R     L +  R  ++  Q   L     P   DWR++G V P++DQ  CGSC++F +  ALEG   +  G     + LSE+ +V C  +       + ++GCNGGL ++ ++Y ++  G+ +E DYPYTG+D    CK +    A       V   +E ++ A L
Sbjct:   16 FNTWASKNNKHFTAIEKLRRR-AIFNMNAKFVDSFNKIGSFKLSVDGPFAAMTNEEYRT----LLKSKRTTEENGQVKYLNIQ-APESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRD-------NGNNGCNGGLGSNVYDYIIE-HGVAKESDYPYTGSD--STCKTNVKSFAKITGYTKVPRNNEAELKAAL 221          
The following BLAST results are available for this feature:
BLAST of CB290580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CATL_BRUPA8.918e-2433.78Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CATK_RABIT1.165e-2332.03Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATQ_RAT3.389e-2331.78Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
ERVC_TABDI2.869e-2250.00Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
MEX2_JACME4.893e-2248.45Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATO_MOUSE4.142e-2134.57Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
MEX1_JACME9.228e-2136.43Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATO_HUMAN2.056e-2032.71Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
CPP1_ENTHI5.064e-1932.21Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CPP2_ENTHI1.128e-1829.73Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd02_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290580 ID=CB290580; Name=CB290580; organism=Citrus sinensis; type=EST; length=835bp
GCACTTGGCTGGTCTCTCTCGTCGTCGTCTCCGCCGTTTCATCAGGGACG
TTGATCGACGATGTTGATCAGCTGATCAGGCAAGTAACGGACGGCGGTGA
CGAGATCCTAAGCCACCACGAGAGCACCAACAACGACCTCTTGGGCGCAG
AGCACCACTTCTCCCTATTCAAGAAGAAGTTCAATAAAGCGTACGCTTCG
CAGGAGGAGCACGACCGTAGGTTCACTATTTTCAAGGCCAACTTGCGACG
CGCCGCGCGTCGCCAGAAGCTCGACCCGAGCGCCACCCACGGCGTCACTC
AGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTC
AGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCC
TACGAATGATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAG
GCCCTGTTAAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACA
ACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAG
CCTCAGTGAGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGG
AACCAGGTTCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCT
TTTGAGTACACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCC
TTACACCGGCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGA
TTGCTGCCTCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAA
ATTGCTGCCAATCTTGTGAAAAATGGTCCCCTTGC
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