CB290580

Overview
NameCB290580
Unique NameCB290580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.202e-14
Identity = 54/192 (28.12%), Postives = 88/192 (45.83%), Query Frame = 3
Query:  159 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRR-----KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 719
            F  +KK FNK+YA+ E+ +     F  ++       K   S    +   SDL+  EF+  +L         K +   +A+        + PA+ D R+   V P++ QG CGSCW+FS   A E A      + + L+EQ+LVDC          +   GC+G  +    EY ++  G+++E  Y Y   ++
Sbjct:   26 FEEYKKAFNKSYATFEDEEAARKNFLESV-------KYVQSNGGAINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDC----------ASQHGCHGDTIPRGIEY-IQHNGVVQESYYRYVAREQ 199          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.691e-12
Identity = 43/141 (30.50%), Postives = 64/141 (45.39%), Query Frame = 3
Query:  411 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            +P   DWR+ GAV  VK+Q  CG+CW+F+    +E    +  G L  LSEQQ++DC          +   GC GG    AFE+ +   G+     YPY        CK D    +A +  ++ V  + +      V   P+
Sbjct:    2 VPQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDC----------AKGYGCKGGWEFRAFEFIISNKGVASGAIYPYKAAK--GTCKTDGVPNSAYITGYARVPRNNESSMMYAVSKQPI 130          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.976e-11
Identity = 59/200 (29.50%), Postives = 87/200 (43.50%), Query Frame = 3
Query:  159 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARR-QKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP-------ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACK 734
            F  +  K NK Y   E+   R  I+ +N R      Q+ D +   G  QF  L+  EF   YL         + +D +  +    LP          DWR    V   K+QG C S W+FS + +LE    +   + ++ S QQ+VDCD+          ++GC+GG    A EY L+  GL+   +YPY    +   CK
Sbjct:   29 FERWALKNNKFYTESEKL-YRMEIYNSNKRMIEEHNQREDVTYQMGENQFMTLSHEEFVDLYL---------QKSDSSVNIMGASLPEVQLEGLGAVDWRNYTTV---KEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYN---------NTGCSGGYNAYAMEYVLRV-GLVSSTNYPYVA--KNQTCK 203          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.976e-11
Identity = 63/222 (28.38%), Postives = 96/222 (43.24%), Query Frame = 3
Query:  198 SQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGA---VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVS--LSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF---SVVSLDEDQIAANLVKNGPL 833
            SQE++  R   +  N  +A    +   +AT  + ++  LT  +  R   G  RK+  PK A     +      LP  +DWR       V PV++Q SCGSC+SF++ G LE    + T    +  LS Q++V C              GC GG          +  GL+ E  +PYTGTD     K D  +  +S  ++        +E  +   LV +GP+
Sbjct:  159 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYM-EYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPM 370          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11
Identity = 63/222 (28.38%), Postives = 95/222 (42.79%), Query Frame = 3
Query:  198 SQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGA---VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVS--LSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF---SVVSLDEDQIAANLVKNGPL 833
            SQE++  R   +  N  +A    +   +AT    ++  LT  +  R   G  RK+  PK A     +      LP  +DWR       V PV++Q SCGSC+SF++ G LE    + T    +  LS Q++V C              GC GG          +  GL+ E  +PYTGTD     K D  +  +S  ++        +E  +   LV +GP+
Sbjct:  159 SQEKYSNRLYKYDHNFVKAINAIQKSWTATT-YKEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKVLHLPTSWDWRNIHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTSNSQTPILSPQEVVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPM 370          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: GMSA_DICDI (Gamete and mating-type specific protein A OS=Dictyostelium discoideum GN=gmsA PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.629e-11
Identity = 48/159 (30.19%), Postives = 66/159 (41.51%), Query Frame = 3
Query:  369 PKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG----KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            PK    AP  P        DW       P++DQG CGSCW+F+++ ALE    +  G      + LS Q  V+C             SGCNGG   + F +  K  G+  E+D PY     G +C    S       N+      +  + A L K GP+
Sbjct:  226 PKPTTPAPTTPAPTSTLTVDWTSYQT--PIRDQGQCGSCWAFASSAALESRYLIKYGTAQKSTLQLSNQNAVNC-----------IASGCNGGWSGNYFNF-FKTPGIAYEKDDPYKAV-TGTSCITTSSVARFKYTNYGYTEKTKAALLAEL-KKGPV 368          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATC_MACFA (Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=CTSC PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.629e-11
Identity = 62/222 (27.93%), Postives = 95/222 (42.79%), Query Frame = 3
Query:  198 SQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGA---VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVS--LSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF---SVVSLDEDQIAANLVKNGPL 833
            SQE++  R   +  N  +A    +   +AT  + ++  LT  +  +   G  RK+  PK       +      LP  +DWR       V PV++Q SCGSC+SF++ G LE    + T    +  LS Q++V C              GC GG          +  GL+ E  +PYTGTD     K D  +  +S  ++        +E  +   LV +GPL
Sbjct:  159 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYM-EYETLTLGDMIKRSGGHSRKIPRPKPTPLTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASVGMLEARIRILTNNSQTPILSSQEVVSCSQYA---------QGCEGGFPYLTAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVYHGPL 370          
The following BLAST results are available for this feature:
BLAST of CB290580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
PEPT1_DERPT2.202e-1428.13Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
BROM2_ANACO2.691e-1230.50Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CATL3_PARTE2.976e-1129.50Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]
CATC_HUMAN2.976e-1128.38Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CATC_PONAB3.886e-1128.38Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
GMSA_DICDI6.629e-1130.19Gamete and mating-type specific protein A OS=Dicty... [more]
CATC_MACFA6.629e-1127.93Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd02_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290580 ID=CB290580; Name=CB290580; organism=Citrus sinensis; type=EST; length=835bp
GCACTTGGCTGGTCTCTCTCGTCGTCGTCTCCGCCGTTTCATCAGGGACG
TTGATCGACGATGTTGATCAGCTGATCAGGCAAGTAACGGACGGCGGTGA
CGAGATCCTAAGCCACCACGAGAGCACCAACAACGACCTCTTGGGCGCAG
AGCACCACTTCTCCCTATTCAAGAAGAAGTTCAATAAAGCGTACGCTTCG
CAGGAGGAGCACGACCGTAGGTTCACTATTTTCAAGGCCAACTTGCGACG
CGCCGCGCGTCGCCAGAAGCTCGACCCGAGCGCCACCCACGGCGTCACTC
AGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTC
AGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCC
TACGAATGATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAG
GCCCTGTTAAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACA
ACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAG
CCTCAGTGAGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGG
AACCAGGTTCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCT
TTTGAGTACACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCC
TTACACCGGCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGA
TTGCTGCCTCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAA
ATTGCTGCCAATCTTGTGAAAAATGGTCCCCTTGC
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