CB290580

Overview
NameCB290580
Unique NameCB290580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:58..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.385e-37
Identity = 102/255 (40.00%), Postives = 130/255 (50.98%), Query Frame = 3
Query:   75 IRQVTDGGDEILSHHESTNNDLLGAEH---HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVK 821
            IR VTD     L   EST    LG       F+ F  ++ K+Y S  E  +RF IF  +L+      +   S   G+ +F+D++  EFR T LG  +        +         LP   DWRE G V PVK+QG CGSCW+FSTTGALE A   ATGK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPY G +    CKF    +   V    N ++ + DE + A  LV+
Sbjct:   31 IRPVTDRAASAL---ESTVFAALGRTRDALRFARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFN-------NFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVN--GICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR 273          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.385e-37
Identity = 94/231 (40.69%), Postives = 120/231 (51.95%), Query Frame = 3
Query:  168 FKKKFNKAYASQEEHDRRFTIFKANLR----RAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLR----LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPL 833
            FK KF K YA+ EE   R ++F   L+       R  K + +    +  FSDLT  E   T  G+ R+      LPK A      PT  + AD DWR KGAV PVKDQG CGSCW+FS   ALEGA+FL TG LVSLSEQ LVDC            + GCNGG    A++Y +   G+  E  YPY   D    C++D   I A+V+++    S DE  +   +   GP+
Sbjct:   23 FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSA------PTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYG-------NQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDN--CRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPV 238          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.033e-37
Identity = 92/222 (41.44%), Postives = 123/222 (55.41%), Query Frame = 3
Query:  183 NKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN---DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK--LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGP 830
            ++ + S EE + R+ IFKAN+               G+  F+D++  E+R TYLG       P DA    +  ++   D  A  DWR +GAV P+K+QG CG CWSFSTTGA EGA +LA GK  LVSLSEQ L+DC            ++GC GGLM  AFEY +   G+  E  YPYT  D G  CKF+   +AA ++++ +V S  E  +AA  V  GP
Sbjct:   37 HQRHYSSEEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGT------PFDASSLEMTESDKIFDASAQVDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYG-------NNGCEGGLMTLAFEYIINNKGIDTESSYPYTAED-GKKCKFNPKNVAAQLSSYVNVTSGSESDLAAK-VTQGP 243          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.200e-36
Identity = 86/235 (36.60%), Postives = 132/235 (56.17%), Query Frame = 3
Query:  135 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPL 833
            DLL A  +F  F  KFNK Y+S+ E  RRF IF+ NL     + + D +A + + +FSDL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+F+T  +LE    +   +L++LSEQQL+DCD+          D+GCNGGL+++A+E  ++ GG+  E DYPY G+D    C+ D +K    V   +  +++ E+++   L   GP+
Sbjct:   20 DLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY---------VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGN--CRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPI 243          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.491e-36
Identity = 92/229 (40.17%), Postives = 121/229 (52.84%), Query Frame = 3
Query:  159 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            F+ FK+K  + Y S  E   R ++F+ NL  A      +P AT GVT FSDLT  EFR  Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +E   FLA   L +LSEQ LV CD           DSGC+GGLMN+AFE+ ++   G +  E+ YPY +G      C      + A++     +  DE QIAA L  NGP+
Sbjct:   38 FAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCD---------KTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPV 257          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.326e-35
Identity = 90/240 (37.50%), Postives = 127/240 (52.92%), Query Frame = 3
Query:  135 DLLGAEHHFSLFKK--KFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLR---RKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            DL   E  + L+++    +    S  E  +RF +FKAN+       K+D      + +F+D+T  EFR TY G +    K+           +      +PA  DWR+KGAV  VKDQG CGSCW+FST  A+EG N + T KLVSLSEQ+LVDCD E         + GCNGGLM SAFE+  + GG+  E +YPYT  + G   +   + +A S+     V ++++      V N P+
Sbjct:   29 DLESEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKE--------ENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQE-GTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQPV 259          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.955e-35
Identity = 86/221 (38.91%), Postives = 117/221 (52.94%), Query Frame = 3
Query:  183 NKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRL----PKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            NKAY + +E   R+  FK N+               G+ Q +DL+  E+R  YLG R  ++L     ++       P    P + DWREK AV PVKDQG CGSC+SFSTTG++EG   + TGKLVSLSEQ ++DC      E       GCNGGLM +AFEY +K  GL  EE YPY        CKF +  +AA + ++  +   ++    N +   P+
Sbjct:   42 NKAY-THKEFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNE-------GCNGGLMTNAFEYIIKNNGLNSEEQYPYE-MKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNALLLNPV 253          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.859e-35
Identity = 86/243 (35.39%), Postives = 134/243 (55.14%), Query Frame = 3
Query:  117 HESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDP-SATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPT--NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPL 833
            H+  ++     +H F  F+ +F + Y S  E   R  IF+ NL+        +  SA +G+T+F+D+T +E++    GL ++         A ++P    +LP +FDWR+K AV  VK+QGSCGSCW+FS TG +EG   + TG+L   SEQ+L+DCD         + DS CNGGLM++A++     GGL  E +YPY    + + C F+++     VA F  +   +E  +   L+ NGP+
Sbjct:  294 HKKHSHRFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKA--KKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPI 524          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.859e-35
Identity = 86/235 (36.60%), Postives = 128/235 (54.47%), Query Frame = 3
Query:  135 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPL 833
            DLL A  +F  F  KFNK Y+S+ E  RRF IF+ NL     + + D SA + + +FSDL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+F+T G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E  +  GG+  E DYPY   +    C+ + +K    V   +  V+L E+++   L   GP+
Sbjct:   20 DLLKAPSYFEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISKYTGLSLPLQKQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANN--GPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPI 243          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.859e-35
Identity = 87/226 (38.50%), Postives = 117/226 (51.77%), Query Frame = 3
Query:  168 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            +K    + Y + EE  RR  +++ N+R          +  HG T     F D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW+FS +G LEG  FL TGKL+SLSEQ LVDC H+         + GCNGGLM+ AF+Y  + GGL  EE YPY   D   +CK+      A+   F  +   E  +   +   GP+
Sbjct:   32 WKSTHRRLYGTNEEEWRR-AVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLML--QIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHD-------QGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKD--GSCKYRAEYAVANDTGFVDIPQQEKALMKAVATVGPI 245          
The following BLAST results are available for this feature:
BLAST of CB290580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CYSP2_MAIZE5.385e-3740.00Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CRUST_PANBO5.385e-3740.69Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CYSP7_DICDI7.033e-3741.44Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CATV_NPVHC1.200e-3636.60Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CYSP_TRYCR3.491e-3640.17Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CYSEP_VIGMU1.326e-3537.50Vignain OS=Vigna mungo PE=1 SV=1[more]
CYSP3_DICDI2.955e-3538.91Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CPR1_DROME3.859e-3535.39Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATV_NPVAP3.859e-3536.60Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATL1_RAT3.859e-3538.50Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd02_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290580 ID=CB290580; Name=CB290580; organism=Citrus sinensis; type=EST; length=835bp
GCACTTGGCTGGTCTCTCTCGTCGTCGTCTCCGCCGTTTCATCAGGGACG
TTGATCGACGATGTTGATCAGCTGATCAGGCAAGTAACGGACGGCGGTGA
CGAGATCCTAAGCCACCACGAGAGCACCAACAACGACCTCTTGGGCGCAG
AGCACCACTTCTCCCTATTCAAGAAGAAGTTCAATAAAGCGTACGCTTCG
CAGGAGGAGCACGACCGTAGGTTCACTATTTTCAAGGCCAACTTGCGACG
CGCCGCGCGTCGCCAGAAGCTCGACCCGAGCGCCACCCACGGCGTCACTC
AGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTC
AGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCC
TACGAATGATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAG
GCCCTGTTAAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACA
ACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAG
CCTCAGTGAGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGG
AACCAGGTTCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCT
TTTGAGTACACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCC
TTACACCGGCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGA
TTGCTGCCTCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAA
ATTGCTGCCAATCTTGTGAAAAATGGTCCCCTTGC
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