CB290580

Overview
NameCB290580
Unique NameCB290580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:58..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.915e-34
Identity = 88/235 (37.45%), Postives = 124/235 (52.77%), Query Frame = 3
Query:  147 AEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVT-QFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPA---DFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            A  H+  FKK+  KA+    E   RF  FK N++ A      +P A + V+ +F+DLTP EF + YL      R  KD  +  +   +  P+     DWR+KGAV PVK+QG CGSCW+FS  G +EG    +   LVSLSEQ LV CD         + D GCNGGLM+ A  + +++  G +  E  YPYT          D+ ++ A +  F  +  DE++IA  + K GP+
Sbjct:   38 ASAHYGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNPDYYARHLKDHKE-DVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD---------NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPV 262          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.915e-34
Identity = 100/255 (39.22%), Postives = 127/255 (49.80%), Query Frame = 3
Query:   75 IRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVK 821
            IR VTD     L   ES     LG   H   F+ F  ++ K+Y S  E  RRF IF  +L       +       G+ +FSD++  EF+ T LG  +        +   +     LP   DWRE G V PVK+Q  CGSCW+FSTTGALE A   ATGK +SLSEQQLVDC         G  + GCNGGL + AFEY    GG+  EE YPY G +    C +     A  V    N ++ + DE + A  LV+
Sbjct:   33 IRPVTDRAASTL---ESAVLGALGRTRHALRFARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNHL-MRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDC-------AGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN--GVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVR 274          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 3.267e-34
Identity = 87/229 (37.99%), Postives = 122/229 (53.28%), Query Frame = 3
Query:  159 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD-FDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG---KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            F+ + +   + Y+S EE + R+ IFK+N+    +          G+  F+D+T  E+R TYLG           ++  I  T   PA   DWR +GAV P+K+QG CG CWSFSTTG+ EGA+F+A+G    LVSLSEQ L+DC            ++GC GGLM  AFEY +   G+  E  YPYT  D G  CKF  S I A + ++  V+   +    +   N P+
Sbjct:   30 FTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDGSALIGTEEEKIFST---PAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYG-------NNGCEGGLMTLAFEYIINNKGIDTESSYPYTAED-GKECKFKTSNIGAQIVSYQNVTSGSEASLQSASNNAPV 246          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.267e-34
Identity = 90/222 (40.54%), Postives = 127/222 (57.21%), Query Frame = 3
Query:  186 KAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH--GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGP-VKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI--AASVANFSVVSLDEDQIAANLVKNGPL 833
            K Y    E +RRF IFK NL+R       DP+ ++  G+ +FSDLT  EF+ +YLG + + +   D  +       D LP + DWRE+GAV P VK QG CGSCW+F+ TGA+EG N + TG+LVSLSEQ+L+DCD        G+ + GC GG    AFE+  + GG++ +E Y YTG D   ACK  + K     ++    VV ++++      V   P+
Sbjct:   50 KNYNGLGEKERRFKIFKDNLKRIEEHNS-DPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDR-------GNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGEDTA-ACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPI 262          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.267e-34
Identity = 90/210 (42.86%), Postives = 113/210 (53.81%), Query Frame = 3
Query:  159 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL 788
            F+ F  +  K Y S EE  +RF IF  NL+      +   S   G+ +F+DLT  EFR+  LG  +        +    L    LP   DWR+ G V PVK QG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPYTG  +   CKF ++ I   V +   ++L
Sbjct:   57 FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATTKGNLK--LTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTG--KNGICKFSQANIGVKVISSVNITL 255          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.267e-34
Identity = 88/232 (37.93%), Postives = 119/232 (51.29%), Query Frame = 3
Query:  150 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            E  ++ +K   N+ Y   EE  RR  +++ N++      +      H  T     F D+T  EFR+   G + +        Q P+    + P   DWREKG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC     P+     + GCNGGLM+ AF+Y    GGL  EE YPY  T+   +CK++     A+   F  +   E  +   +   GP+
Sbjct:   26 EAQWTKWKAMHNRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCS---GPQG----NEGCNGGLMDYAFQYVADNGGLDSEESYPYEATE--ESCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPI 245          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.573e-34
Identity = 87/236 (36.86%), Postives = 122/236 (51.69%), Query Frame = 3
Query:  147 AEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVT-QFSDLTPAEFRRTYLG----LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            A  H+  FKK+  KA+    E   RF  FK N++ A      +P A + V+ +F+DLTP EF + YL      R      +D       P+  +  D  WR+KGAV PVK+QG CGSCW+FS  G +EG    +   LVSLSEQ LV CD         + D GCNGGLM+ A  + +++  G +  E  YPYT          D+ ++ A +  F  +  DE++IA  + K GP+
Sbjct:   38 ASAHYGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNPDYYARHLKNHKEDVHVDDSAPSGVMSVD--WRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD---------NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPV 262          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.573e-34
Identity = 87/237 (36.71%), Postives = 120/237 (50.63%), Query Frame = 3
Query:  138 LLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKL----DPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPL 833
            L  A   +  FK K+ + Y   EE   R  IF+ N +      K     + +    + +F D+T  EF     G   +   P      P   T     + DWR KGAV PVKDQG CGSCW+FSTTG+LEG +FL TG L+SL+EQQLVDC     P+       GCNGG MN AF+Y     G+  E  YPY   D   +C+FD + +AA+ +  + ++   +      V++ GP+
Sbjct:   13 LAAASPSWEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKGNIPRRSAPVSVFY-PKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQ-------GCNGGWMNDAFDYIKANNGIDTEAAYPYEARD--GSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPI 239          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.278e-34
Identity = 87/226 (38.50%), Postives = 113/226 (50.00%), Query Frame = 3
Query:  168 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            +K    + Y   EE  RR  +++ N++      +      HG T     F D+T  EFR+   G + +        Q P+    ++P   DWREKG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC            + GCNGGLM++AF Y    GGL  EE YPY G D    C +     AA+   F  +   E  +   +   GP+
Sbjct:   32 WKATHRRLYGMNEEGWRR-AVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQEPLFA--EIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDT-ETCNYKPECSAANDTGFVDLPQREKALMKAVATLGPI 246          
BLAST of CB290580 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.241e-33
Identity = 87/213 (40.85%), Postives = 117/213 (54.93%), Query Frame = 3
Query:  207 EHDRRFTIFKANLRRA-ARRQKLDPSATH--GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAV-GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 833
            EH+RRF +F  NL+   A   + D       G+ +F+DLT  EFR TYLG     R  +  +         LP   DWR+KGAV  PVK+QG CGSCW+FS   A+EG N + TG+LVSLSEQ+LV+C            +SGCNGG+M+ AF +  + GGL  EEDYPYT  D G      +S+   S+  F  V  +++      V + P+
Sbjct:   84 EHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLGTTPAGRGRRVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECAR-------NGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMD-GKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPV 288          
The following BLAST results are available for this feature:
BLAST of CB290580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CYSP1_LEIPI1.915e-3437.45Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
ALEU_HORVU1.915e-3439.22Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP4_DICDI3.267e-3437.99Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CPR2_ARATH3.267e-3440.54Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CYSP3_SOLLC4.267e-3442.86Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATL1_CERAE4.267e-3437.93Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
LMCPA_LEIME5.573e-3436.86Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP2_HOMAM5.573e-3436.71Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATL1_CANFA7.278e-3438.50Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CYSP1_ORYSJ1.241e-3340.85Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd02_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290580 ID=CB290580; Name=CB290580; organism=Citrus sinensis; type=EST; length=835bp
GCACTTGGCTGGTCTCTCTCGTCGTCGTCTCCGCCGTTTCATCAGGGACG
TTGATCGACGATGTTGATCAGCTGATCAGGCAAGTAACGGACGGCGGTGA
CGAGATCCTAAGCCACCACGAGAGCACCAACAACGACCTCTTGGGCGCAG
AGCACCACTTCTCCCTATTCAAGAAGAAGTTCAATAAAGCGTACGCTTCG
CAGGAGGAGCACGACCGTAGGTTCACTATTTTCAAGGCCAACTTGCGACG
CGCCGCGCGTCGCCAGAAGCTCGACCCGAGCGCCACCCACGGCGTCACTC
AGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTC
AGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCC
TACGAATGATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAG
GCCCTGTTAAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACA
ACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAG
CCTCAGTGAGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGG
AACCAGGTTCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCT
TTTGAGTACACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCC
TTACACCGGCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGA
TTGCTGCCTCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAA
ATTGCTGCCAATCTTGTGAAAAATGGTCCCCTTGC
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