CB290581

Overview
NameCB290581
Unique NameCB290581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6287 contig Csv1_Contig6287:1148..1918. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.330e-13
Identity = 50/134 (37.31%), Postives = 66/134 (49.25%), Query Frame = -2
Query:  309 GDSAVCSACEMAVVWVQNQLKQKQTK--EKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEAA 704
            G+S  CS    A+V     L    T     + SYI    DS     GE +I C  I ++P++ FTI    + + P  YIL++      +C SGF   D+    G LWILGDVF+  Y TVFD G  +IG A  A
Sbjct:  247 GESIACSDGCQAIVDTGTSLLAGPTTAISNIQSYIGASEDS----SGEVVISCSSIDSLPDIVFTINGVQYPVPPSAYILQSNG----ICSSGFEGMDISTSSGDLWILGDVFIRQYFTVFDRGNNQIGLAPVA 372          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 33/84 (39.29%), Postives = 50/84 (59.52%), Query Frame = -2
Query:  312 IIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEA 563
            ++ C+  PT+P++SF +G K +TL+   Y+ +      ++C     A D+PPP GP W LG  F+  ++T FD G  RIGFA A
Sbjct:  316 VVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRGNNRIGFALA 399          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13
Identity = 45/132 (34.09%), Postives = 62/132 (46.97%), Query Frame = -2
Query:  309 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEAA 704
            G S  C+    A+V     L    T    ++ I     +  N  G+  + C  I  +P++ FTI    + L    YIL++ EG    C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  262 GQSIACNGGCQAIVDTGTSLLSGPTN--AIANIQSKIGASQNSQGQMAVSCSSIKNLPDIVFTINGIQYPLPASAYILQSQEG----CSSGFQGMDIPTSSGELWILGDVFIRQYFTVFDRANNQVGLAPVA 387          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.622e-13
Identity = 44/132 (33.33%), Postives = 65/132 (49.24%), Query Frame = -2
Query:  309 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEAA 704
            G++  C+    A+V     L    T    ++ I     +  N  GE ++ C  I ++P++ FTI    + + P  YIL++       CISGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  263 GEAIACAEGCQAIVDTGTSLLTGPTSP--IANIQSDIGASENSDGEMVVSCSAISSLPDIVFTINGIQYPVPPSAYILQSQGS----CISGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.126e-12
Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = -2
Query:  312 ESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEA 569
            E +++C+++PT+P++SF +G K +TL+   Y+L+        C       D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  315 EYVVNCNQMPTLPDISFHLGGKAYTLTSADYVLQDPYNNIS-CTLALHGMDIPPPTGPVWVLGATFIRKFYTEFDRRNNRIGFALA 399          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.126e-12
Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = -2
Query:  309 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEAA 704
            G++  C+    A+V     L    T    ++ I     +  N  GE ++ C  I ++P++ FTI    + L P  YIL++       C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  263 GEAIACAEGCQAIVDTGTSLLTGPTSP--IANIQSDIGASENSDGEMVVSCSAISSLPDIVFTINGVQYPLPPSAYILQSQGS----CTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.126e-12
Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = -2
Query:  312 GESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEA 572
            G+  IDC +  ++ +V+FT+    FTL PE YIL+        C+S FM  D+P P GPL ILGD F+  Y++++D G   +G A A
Sbjct:  312 GQFTIDCGKKSSLEDVTFTLAGYNFTLGPEDYILEASGS----CLSTFMGMDMPAPVGPLAILGDAFLRKYYSIYDLGADTVGIATA 394          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.471e-12
Identity = 47/156 (30.13%), Postives = 78/156 (50.00%), Query Frame = -2
Query:  312 FNGAEYVSTGIKTVVEKENVSAGDSAV-CSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSL--PNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEA 770
            F+    + TG+  + + + VS G S + C    +A+V          T     S I +L ++L     + + ++ C+  PT+P++SF +G K +TL+   Y+ +      ++C     A D+PPP GP W LG  F+  ++T FD    RIGFA A
Sbjct:  256 FHYINLIKTGVWQI-QMKGVSVGSSTLLCEDGCLALVDTGASYISGST-----SSIEKLMEALGAKKRLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALA 405          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: RENI_MACFA (Renin OS=Macaca fascicularis GN=REN PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.471e-12
Identity = 47/156 (30.13%), Postives = 78/156 (50.00%), Query Frame = -2
Query:  312 FNGAEYVSTGIKTVVEKENVSAGDSAV-CSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSL--PNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEA 770
            F+    + TG+  + + + VS G S + C    +A+V          T     S I +L ++L     + + ++ C+  PT+P++SF +G K +TL+   Y+ +      ++C     A D+PPP GP W LG  F+  ++T FD    RIGFA A
Sbjct:  256 FHYINLIKTGVWQI-QMKGVSVGSSTLLCEDGCLALVDTGASYISGST-----SSIEKLMEALGAKKRLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALA 405          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: RENI_HUMAN (Renin OS=Homo sapiens GN=REN PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.471e-12
Identity = 47/156 (30.13%), Postives = 78/156 (50.00%), Query Frame = -2
Query:  312 FNGAEYVSTGIKTVVEKENVSAGDSAV-CSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSL--PNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEA 770
            F+    + TG+  + + + VS G S + C    +A+V          T     S I +L ++L     + + ++ C+  PT+P++SF +G K +TL+   Y+ +      ++C     A D+PPP GP W LG  F+  ++T FD    RIGFA A
Sbjct:  256 FHYINLIKTGVWQI-QMKGVSVGSSTLLCEDGCLALVDTGASYISGST-----SSIEKLMEALGAKKRLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALA 405          
The following BLAST results are available for this feature:
BLAST of CB290581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PEPA_BOVIN1.330e-1337.31Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]
RENI_CALJA2.269e-1339.29Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
PEPA_SORUN2.963e-1334.09Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
PEPA2_MACFU8.622e-1333.33Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
RENI_SHEEP1.126e-1238.37Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
PEPA_MACMU1.126e-1233.33Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
CARP_NEUCR1.126e-1241.38Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]
RENI_PANTR1.471e-1230.13Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]
RENI_MACFA1.471e-1230.13Renin OS=Macaca fascicularis GN=REN PE=2 SV=1[more]
RENI_HUMAN1.471e-1230.13Renin OS=Homo sapiens GN=REN PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290581 ID=CB290581; Name=CB290581; organism=Citrus sinensis; type=EST; length=801bp
TTTTTTTTTTTTTTTTTGAAAAAACGAAGTCCAATGACCGTTATAAGATG
AAATTTCTCCAAATAAGTAAAACTATCACGCCAGAATATCATAAAATTAA
AGTACTTTAAACATAGGATGATAGGATTTTACATAAGTATATATCAGCAT
ATCATCTGTGGGGATGATGAAGATAGTTATGCATAAAAGCATACTGATCG
TTTTACAGTACATGAAAACCATAATCTACATTCTAGAACCCTCCTCCTCA
TATGAGCAGGTGATGATCGCTGCTACTACATAAAAACTTGACAGTAAGTA
GATCATTACGCAGCCTCAGCAAAGCCGATCCGGAGCTTACCAAAGTCGAA
AACAGTGTGATAAACCCCCATGAATACATCTCCCAGAATCCACAGAGGAC
CCCTTGGAGGAGGCAGGTCGAAAGCCATGAAGCCACTGATGCAGACTTCT
GCAATCCCTTCTCCGGTTTTCAAAATATACTGCTCTGGAGAGAGGGTGAA
AATTTTGTCTCCGATGGTGAATGAAACATTTGGCATGGTTGGAATGCGAT
CACAGTCAATAATTGATTCCCCCATCGGATTTGGCAGGCTGTCGCAGAGC
TCATTTATATAACTGAGTACTTTCTCCTTTGTTTGCTTTTGTTTTAGCTG
ATTCTGGACCCAAACCACGGCCATTTCACAAGCACTGCACACTGCACTAT
CCCCGGCTGATACGTTTTCCTTCTCAACCACGGTCTTGATCCCAGTACTC
ACATATTCAGCGCCATTGAAAGCACATAAACCAATCTGCTGACATACTTT
C
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