CB290582

Overview
NameCB290582
Unique NameCB290582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.047e-31
Identity = 72/182 (39.56%), Postives = 109/182 (59.89%), Query Frame = 2
Query:  242 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            PL N++D +YFG IGIG+P Q F+VIFDTGSSNLWVPS  C  S +C  H+R+  ++S+TY    ++  I YG+GS++G                  F +  T  GS  +  + FDGI+GL +  I+   A PV+DN+  Q LVS+++FS +L+ +   + G  ++FGG+D  ++ G   +V
Sbjct:   66 PLVNYLDMEYFGTIGIGTPAQEFTVIFDTGSSNLWVPSIYC-SSPACTNHNRFNPQESSTYQATSQTLSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLY-YSPFDGILGLAYPSISSSGATPVFDNIWNQDLVSQDLFSVYLSSND--QSGSVVMFGGIDSSYYTGSLNWV 243          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: PEPC_CAVPO (Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.865e-31
Identity = 66/173 (38.15%), Postives = 102/173 (58.96%), Query Frame = 2
Query:  251 NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKG 769
            ++MDA YFG+I +G+PPQ+F V+FDTGSSNLWVPS  C  S++C  H+R+  R S+TY    +S  + YG+GS++G F                F  +  E    F+ A FDGI+GLG+  ++ G A      ++ +G +S+ +FS +L     ++E G+++ GGVD   + G
Sbjct:   73 SYMDAAYFGQISLGTPPQSFQVLFDTGSSNLWVPSVYC-SSLACTTHTRFNPRDSSTYVATDQSFSLEYGTGSLTGVFGYDTMTIQDIQVPKQEFGLSETEPGSDFVYAEFDGILGLGYPGLSEGGATTAMQGLLREGALSQSLFSVYLGSQQGSDE-GQLILGGVDESLYTG 243          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.158e-30
Identity = 72/182 (39.56%), Postives = 103/182 (56.59%), Query Frame = 2
Query:  245 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIE----ATREGSLTFLLARFDGIIGLGFREIAVGD-AVPVWDNMVEQGLVSEEVFSFWLNRDP-DAEEGGEIVFGGVDPKHFKG 769
            L ++ +AQY+G + IG+PPQNF V+FDTGSSNLWVP + C F  I+C  H+R+  +KS++ T  G S EI YG+GS+ G                    +    AT E  +TF+ A+FDGI G+G+  I+V   + P+        +   ++F+FWL+RD  D   GGEI     DP H+ G
Sbjct:   61 LSDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCTATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIFGMGWDTISVNKISQPMDQIFANSAICKNQLFAFWLSRDANDITNGGEITLCETDPNHYVG 242          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: PEPAF_RABIT (Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.084e-28
Identity = 68/183 (37.16%), Postives = 101/183 (55.19%), Query Frame = 2
Query:  221 DSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKG 769
            D D    PL+N++D  Y G I IG+PPQ F V+ DTGS++LWVPS  C  S +C  H+ +    S+T+   G+   I YGSG +SGF +               F  + +E       A FDGI+GL +  ++     PV+DN+  QGL+S+ +F+F+L+     E G  ++ GGVDP ++ G
Sbjct:   58 DPDVSFEPLRNYLDLAYIGIISIGTPPQEFKVVLDTGSADLWVPSIYC-SSPACGKHNTFNPLLSSTFLVSGRPINIVYGSGRMSGFLAYDTVQIAGLVDVAQAFGLSLQEPGKFMEYAVFDGILGLSYPSLSFEGITPVFDNLWAQGLISQNLFAFYLS--SKEERGSMLMLGGVDPSYYSG 237          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: PLM1_PLAFA (Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 68/185 (36.76%), Postives = 105/185 (56.76%), Query Frame = 2
Query:  233 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSL--TFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTY 781
            D + L +  +  Y+GE  IG   Q F+ IFDTGS+NLWVPS++C  +I C   + Y S KS TY + G   E+NY SG++SGFFS+              FIE T        + L +FDGI+GLG++++++G   PV   +  Q  + + VF+F+L  D   +  G +  GG++ + ++G+ TY
Sbjct:  127 DSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSK-DIVTIANLSFPYKFIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYLPFDD--KHKGYLTIGGIEDRFYEGQLTY 307          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: PLM1_PLAF7 (Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0076 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 68/185 (36.76%), Postives = 105/185 (56.76%), Query Frame = 2
Query:  233 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSL--TFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTY 781
            D + L +  +  Y+GE  IG   Q F+ IFDTGS+NLWVPS++C  +I C   + Y S KS TY + G   E+NY SG++SGFFS+              FIE T        + L +FDGI+GLG++++++G   PV   +  Q  + + VF+F+L  D   +  G +  GG++ + ++G+ TY
Sbjct:  127 DSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSK-DIVTIANLSFPYKFIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYLPFDD--KHKGYLTIGGIEDRFYEGQLTY 307          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: PAG1_SHEEP (Pregnancy-associated glycoprotein 1 OS=Ovis aries GN=PAG1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 70/189 (37.04%), Postives = 107/189 (56.61%), Query Frame = 2
Query:  224 SDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSIS--CYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            S+  I PL+N MD  Y G I IG+PPQ F V+FDTGSS+L VPS  C       C    ++K  +S+T+     +  I +GSG++ GF +               F     E   ++L   FDGI+GL + +I+   A+P++D +  +G  SE VF+F+LN+  D +EG  ++FGGVD +++KG+  +V
Sbjct:   56 SNLTIHPLRNIMDMLYVGNITIGTPPQEFQVVFDTGSSDLLVPSINCLSPTKRPCSKQDKFKHHQSSTFRFTNDTFRIYFGSGTMRGFVAHDTVRIGDLVSTDQPFGLIFLE---SWLDIPFDGILGLNYPKISFSGAIPIFDKLKNEGAFSEPVFAFYLNK--DKQEGSVVMFGGVDHRYYKGELNWV 239          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: PAG1_BOVIN (Pregnancy-associated glycoprotein 1 OS=Bos taurus GN=PAG1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.486e-27
Identity = 65/181 (35.91%), Postives = 101/181 (55.80%), Query Frame = 2
Query:  242 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            PL+N  D  Y G I IG+PPQ F V+FDT SS+LWVPS  C  S +C  H R++  +S+T+    K+  I YGSG + G                  F  +  E      +  +DG++GL +  I+   A+P++D +  Q  +SE VF+F+L++  D  EG  ++FGGVD ++++G+  +V
Sbjct:   62 PLRNIKDLVYMGNITIGTPPQEFQVVFDTASSDLWVPSDFC-TSPACSTHVRFRHLQSSTFRLTNKTFRITYGSGRMKGVVVHDTVRIGNLVSTDQPFGLSIEEYGFEGRI--YDGVLGLNYPNISFSGAIPIFDKLKNQRAISEPVFAFYLSK--DEREGSVVMFGGVDHRYYEGELNWV 237          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: PAG1_PIG (Pregnancy-associated glycoprotein 1 OS=Sus scrofa GN=PAG1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.240e-24
Identity = 66/195 (33.85%), Postives = 103/195 (52.82%), Query Frame = 2
Query:  200 GVRHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            G++  L       L L N++D  Y G I IG+PPQ FSVIFDT SS+LWVPS++C+ S +C  H  +    S+T+    ++ ++   SG +SG                  F  +  E       A FDG++GLG+  +A+    PV+DN+ +QG + E VF+ +L+   + ++G  ++ GGVD   F G   +V
Sbjct:   53 GLKGSLCSPKISCLRLWNYLDMVYVGNITIGTPPQLFSVIFDTASSDLWVPSNQCH-SRACVTHRSFNPTLSSTFQSSNRTVKLAPHSGLVSGLLGYDTVQIGRFKSENQAFGLSQSEPVKELENAFFDGVLGLGYPSLAIQGTTPVFDNLRKQGQIPEPVFALYLS--TNTKKGSVLMIGGVDNNFFTGNLKWV 244          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: PLM2_PLAFA (Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.154e-24
Identity = 65/191 (34.03%), Postives = 104/191 (54.45%), Query Frame = 2
Query:  215 LGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEA--TREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTY 781
            LG S+++I  L +F +  ++G+  +G   Q F+ I DTGS+NLWVPS KC  +  C     Y S KS TY + G   E+NY SG++SGFFS+              FIE   T     T+  + FDGI+GLG++++++G   P+   +  Q  +   +F+F+L      +  G +  GG++ + ++G  TY
Sbjct:  123 LGSSNDNI-ELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKC-TTAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSK-DLVTVGNLSLPYKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYL--PVHDKHTGFLTIGGIEERFYEGPLTY 308          
The following BLAST results are available for this feature:
BLAST of CB290582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PEPA_CALJA3.047e-3139.56Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
PEPC_CAVPO8.865e-3138.15Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1[more]
ASP3_CAEEL1.158e-3039.56Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
PEPAF_RABIT1.084e-2837.16Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1[more]
PLM1_PLAFA7.024e-2836.76Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2[more]
PLM1_PLAF77.024e-2836.76Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7... [more]
PAG1_SHEEP7.024e-2837.04Pregnancy-associated glycoprotein 1 OS=Ovis aries ... [more]
PAG1_BOVIN3.486e-2735.91Pregnancy-associated glycoprotein 1 OS=Bos taurus ... [more]
PAG1_PIG1.240e-2433.85Pregnancy-associated glycoprotein 1 OS=Sus scrofa ... [more]
PLM2_PLAFA6.154e-2434.03Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01cd03_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290582 ID=CB290582; Name=CB290582; organism=Citrus sinensis; type=EST; length=784bp
GCACTAGGAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTT
TATGGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTA
CGGAGAATTGGCTTGAAGAAGCGGCGACTAGATCTTCATAGTCTAAATGC
TGCAAGAATAACAAGAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTG
GCGTGCGCCATCGTTTGGGTGATTCAGATGAAGATATATTGCCTTTGAAG
AACTTTATGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCC
ACAAAATTTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTC
CATCTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTAC
AAGTCCAGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAAT
AAACTATGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTG
AAGTTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGA
GAAGGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCT
TGGGTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATA
TGGTTGAGCAGGGCCTTGTAAGCGAGGAGGTCTTCTCATTCTGGCTCAAC
AGGGATCCAGACGCTGAAGAGGGTGGAGAGATTGTTTTTGGTGGTGTTGA
TCCAAAGCACTTTAAAGGGAAGCATACCTATGTT
back to top