CB290601

Overview
NameCB290601
Unique NameCB290601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.648e-31
Identity = 73/177 (41.24%), Postives = 105/177 (59.32%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVI--------DMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQP-LDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LG A  LAYLHHDC P I   D+K+ N+LL   FE ++ DFGLA+ I        D+ +  +   +AGSYGY+APE+A   +++EK D+ SYGVVLLE+LTG+ P+ P L  G     W R+++ +      + D RL+    S +  M+  L VA +C S    + P M++VV+ML
Sbjct:  862 LGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPDLPGGAHLVKWVRDHLAEKKDPSRLLDPRLDGRTDSIMHEMLQTLAVAFLCVSNKANERPLMKDVVAML 1038          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.134e-30
Identity = 76/173 (43.93%), Postives = 106/173 (61.27%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQ----PLDDGGDFATWGRNYIRDHFLTPGIF-DTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LG+A GL+YLH  C P+I  RD+K+ NILLD++FEA VGDFGLAK++D       +AV G+ G+IAPEY  T K SEK D+  YG++LLEL+TG+          DD      W +  +++  L   +  D + N+E++        V++VAL+CT  SP + P M EVV ML
Sbjct:  408 LGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQ----VIQVALLCTQGSPMERPKMSEVVRML 576          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.134e-30
Identity = 88/199 (44.22%), Postives = 112/199 (56.28%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVI-----DMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGDFATWGRNYIRDHFLTPGIF--------------DTRLNFEDKS-TVDPMI-----------FVLKVALMCTSISPFDSPSMREVVSML 776
            +GAA+GL+YLHHD  P I  RD+KSNNILLD + +  V DFGLAK +     D     SMS VAGSYGYIAPEY YT KV+EK D+ S+GVVLLEL+TG+ P        + +++G N     F                    D+  N+ D S  VDP +            VL VAL+CTS  P + P+MR+VV +L
Sbjct:  796 VGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRP--------NDSSFGENKDIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMKLSTREYEEIEKVLDVALLCTSSFPINRPTMRKVVELL 986          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.481e-30
Identity = 81/196 (41.33%), Postives = 107/196 (54.59%), Query Frame = -1
Query:  222 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFV-----------LKVALMCTSISPFDSPSMREVVSMLIXXXXXXXXXXXFPTYD 776
            +GAA+GLAYLHHDC PRI  RDIKS+NILLD+ FEAH+ DFG+AK I   +  + + V G+ GYI PEYA T +++EK DI S+G+VLLELLTG+  V              N    H L     D     E    VDP + V            ++AL+CT  +P + P+M EV  +L+            P+ D
Sbjct:  752 VGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVD-------------NEANLHQLILSKADDNTVME---AVDPEVTVTCMDLGHIRKTFQLALLCTKRNPLERPTMLEVSRVLLSLVPSLQVAKKLPSLD 931          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30
Identity = 77/179 (43.02%), Postives = 105/179 (58.66%), Query Frame = -1
Query:  270 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDM---PQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGG-DFATWGRNYI------RDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSMLI 776
            +G A+G+ YLHHDC P I  RDIKS+N+LLD   EAH+GDFGLAKV+         S +  A SYGYIAPEYAY++K +EK D+ S G+VL+E++TG+ P   +     D   W   ++      RD  + P +    L FE+    D    VL++AL CT  SP + PS R+    L+
Sbjct: 1063 VGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAEMDMVRWVETHLEVAGSARDKLIDPKL-KPLLPFEE----DAACQVLEIALQCTKTSPQERPSSRQACDSLL 1236          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.300e-30
Identity = 74/179 (41.34%), Postives = 105/179 (58.66%), Query Frame = -1
Query:  270 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVID---MPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPL-DDGGDFATWGRNYIRDHFLTPG------IFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSMLI 776
            LG A+G+ YLH+DC P I  RDIKS+N+LLD   EAH+GDFGLAK++        +S +  AGSYGYIAPEYAY++K +EK D+ S G+VL+E++TG+ P + + D+  D   W    +      PG      + D+ L        +    VL++AL CT   P + PS R+    L+
Sbjct: 1058 LGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEETDMVRWVETVLD---TPPGSEAREKLIDSELKSLLPCEEEAAYQVLEIALQCTKSYPQERPSSRQASEYLL 1233          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.254e-29
Identity = 75/174 (43.10%), Postives = 106/174 (60.92%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFK---SMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQ-PLDDGGDFATWGRNYIRD--HFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LGAA+GL YLHH     +  RD+KS+NILLD+++   + DFGLAK+I     +   S   V G+ GYIAPEYAYT KV+EK D+ S+GVVL+EL+TG+ P++    +  D   W  +  ++    +   + DT +  E K   +  + VL +AL+CT  SP   P M+ VVSML
Sbjct:  793 LGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVMWVWSVSKETNREMMMKLIDTSIEDEYK---EDALKVLTIALLCTDKSPQARPFMKSVVSML 963          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.793e-29
Identity = 70/170 (41.18%), Postives = 104/170 (61.18%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQP--LDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            +GAA+GL+YLHHDC PRI  RDIKS+NILLD   EA V DFGLAK+++  +    + VAG++GY+APEY  + + +EK D+ S+GV++LE+L+G+ P     ++ G +   W +  I +      I D         ++D +   L +A  C S SP + P+M  VV +L
Sbjct:  408 IGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEK-RPRDIVDPNCEGMQMESLDAL---LSIATQCVSPSPEERPTMHRVVQLL 573          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.648e-29
Identity = 73/173 (42.20%), Postives = 104/173 (60.12%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQ----PLDDGGDFATWGRNYIRDHFLTPGIF-DTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LG+A GL+YLH  C P+I  RD+K+ NILLD++FEA VGDFGLA+++D       +AV G+ G+IAPEY  T K SEK D+  YG++LLEL+TG+          DD      W +  +++  L   +  D + N+ +         +++VAL+CT  SP + P M EVV ML
Sbjct:  411 LGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQ----LIQVALLCTQSSPMERPKMSEVVRML 579          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.765e-29
Identity = 70/170 (41.18%), Postives = 103/170 (60.59%), Query Frame = -1
Query:  276 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVID-MPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGD--FATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSM 776
            +GAA GLA+LHH C P I  RD+KS+N+LLD+ FEA V DFG+A+++  +    S+S +AG+ GY+ PEY  + + + K D+ SYGV+LLELL+G+ P+ P + G D     W +   R+      I D  L   DKS    +   LK+A  C    PF  P+M ++++M
Sbjct:  966 IGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAKQLYREK-RGAEILDPEL-VTDKSGDVELFHYLKIASQCLDDRPFKRPTMIQLMAM 1133          
The following BLAST results are available for this feature:
BLAST of CB290601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
Y4265_ARATH6.648e-3141.24Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH1.134e-3043.93Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
HSL2_ARATH1.134e-3044.22LRR receptor-like serine/threonine-protein kinase ... [more]
ERL1_ARATH1.481e-3041.33LRR receptor-like serine/threonine-protein kinase ... [more]
GSO1_ARATH1.934e-3043.02LRR receptor-like serine/threonine-protein kinase ... [more]
GSO2_ARATH3.300e-3041.34LRR receptor-like serine/threonine-protein kinase ... [more]
IKU2_ARATH1.254e-2943.10Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
FEI1_ARATH2.793e-2941.18LRR receptor-like serine/threonine-protein kinase ... [more]
SERK2_ARATH3.648e-2942.20Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
BRL1_ARATH4.765e-2941.18Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ce03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ce03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290601 ID=CB290601; Name=CB290601; organism=Citrus sinensis; type=EST; length=776bp
TTTTTTTTTTTTTTTTTACACCACCGTTGCTGAACTTTATTGAGGGCAAA
GGGATTTACACAACCCCCAAAGAGCATTAATTTTATTTGCTGATGGATAA
ATGTACATGATCTCATCAACTGGCTATTGCAAATAATGTGAGGAAAAATC
GGCACCAATTAAAACCATTTTGGGTAATAAAATCCCCAAAATGGTTACCT
ACTTTCATGAATCTGAGGAAAATCATAAGTTGGAAAAAAATTAAATCTGC
CTTCTCCCTCATTAAACTCAATAAGCATTGATACAACTTCCCGCATTGAG
GGGCTATCAAAAGGAGAAATGCTTGTGCACATCAAAGCAACTTTTAAAAC
AAAAATCATGGGGTCAACTGTACTTTTATCTTCAAAATTTAATCGCGTAT
CGAATATCCCCGGAGTCAAAAAATGGTCCCGAATATAATTCCTCCCCCAA
GTAGCAAAATCCCCTCCATCATCTAATGGCTGTACAGGAGTTCTTCCAGT
TAACAACTCCAACAGGACAACACCATAGCTGGAAATGTCCCATTTTTCCG
AAACCTTCATAGTGTATGCATATTCAGGGGCAATGTAACCATATGATCCT
GCAACTGCTGACATTGATTTAAATTGAGGCATGTCAATCACTTTAGCTAA
TCCAAAATCACCAACATGCGCTTCAAATTTATCATCAAGTAGAATATTAT
TAGACTTGATATCACGGGGAAAAATTCTTGGTTTGCAATCATGATGGAGG
TAAGCGAGACCCTCGGCAGCTCCAAG
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