CB290601

Overview
NameCB290601
Unique NameCB290601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.174e-27
Identity = 74/172 (43.02%), Postives = 102/172 (59.30%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQ----PLDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LG+A GLAYLH  C  +I  RD+K+ NILLD++FEA VGDFGLAK+++       +AV G+ G+IAPEY  T K SEK D+  YGV+LLEL+TG+          DD      W +  +++  L   + D  L  E K     +  ++++AL+CT  S  + P M EVV ML
Sbjct:  400 LGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKL-ESLVDAEL--EGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRML 568          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.002e-27
Identity = 66/176 (37.50%), Postives = 103/176 (58.52%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPL----DDGGDFATWGRNYIRD----HFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            L  A  L+YLH  C P++  RDIK +NILLD+ + A++ DFGL+K++   Q    + VAG++GY+APEYA T +VSEK D+ SYG+VLLEL++ +  + P     ++G +  +W    +         T G+++T          D ++ VL +AL CT  S    P+M++ V +L
Sbjct:  364 LDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWET-------GPPDDLVEVLHLALKCTVDSLSIRPTMKQAVRLL 532          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.460e-27
Identity = 73/172 (42.44%), Postives = 98/172 (56.98%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQ---PLDDGGDFATWGRNYIRDHFLTPGIFDTRLNFE-DKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            +GAA GL YLH  C P+I  RD+K+ NILLD+ FEA VGDFGLAK+++       +AV G+ G+IAPEY  T + SEK D+  +G++LLEL+TG   ++    +   G    W R  +        + D  L    D+  V  M   L+VAL+CT   P   P M EVV ML
Sbjct:  401 IGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEWVRK-LHKEMKVEELVDRELGTTYDRIEVGEM---LQVALLCTQFLPAHRPKMSEVVQML 568          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.460e-27
Identity = 72/169 (42.60%), Postives = 97/169 (57.40%), Query Frame = -1
Query:  273 GAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGG--DFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 773
            GAAEGLAYLH  C+P I  RDIKS+NILL D F AH+ DFGLA++I        + + G+ GYI PEY      + K D+ S+GVVLLELLTGR P+      G  D  +W    ++       IFD  +   DK   + M+ VL++A  C   +P   P+ +++VS L
Sbjct:  849 GAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQ-MKTEKRESEIFDPFI--YDKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWL 1014          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 7.607e-27
Identity = 73/172 (42.44%), Postives = 101/172 (58.72%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQ----PLDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LG+A GLAYLH  C  +I   D+K+ NILLD++FEA VGDFGLAK+++       +AV G+ G+IAPEY  T K SEK D+  YGV+LLEL+TG+          DD      W +  +++  L   + D  L  E K     +  ++++AL+CT  S  + P M EVV ML
Sbjct:  381 LGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKL-ESLVDAEL--EGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRML 549          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.213e-26
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = -1
Query:  270 AEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGD--FATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSMLI 767
            A GL +LHH+C P I  RD+K++N+LLD    A V DFGLA+++++      + +AG+ GY+APEY  T + + + D+ SYGV+ +EL TGR  V    DGG+     W R  +  +    G   T    +  +  + M  +LK+ + CT+  P   P+M+EV++ML+
Sbjct:  923 ARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAV----DGGEECLVEWARRVMTGNMTAKGSPITLSGTKPGNGAEQMTELLKIGVKCTADHPQARPNMKEVLAMLV 1086          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.931e-26
Identity = 71/176 (40.34%), Postives = 102/176 (57.95%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDG------GDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIF--VLKVALMCTSISPFDSPSMREVVSML 776
            LGAA GL YLH  C P+I  RD+K+ NILLD+ FEA VGDFGLAK++D       +AV G+ G+IAPEY  T + SEK D+  +GV++LEL+TG    + +D G      G   +W R    +       F   ++ + K   D ++   V+++AL+CT   P   P M +V+ +L
Sbjct:  405 LGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGH---KMIDQGNGQVRKGMILSWVRTLKAEK-----RFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVL 572          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 4.931e-26
Identity = 69/166 (41.57%), Postives = 92/166 (55.42%), Query Frame = -1
Query:  285 GAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTP---VQPLDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREV 773
            G A  L+Y+HHD  P I  RDI S NILL + +EA + DFG AK++  P   + SAVAG+YGY+APE AY MKV+EK D+ S+GV+ LE++ G  P   V  L      AT     I DH         RL        + ++ +LKVAL+C    P   P+M  +
Sbjct:  885 GVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLK-PDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLSSSPPDATLSLKSISDH---------RLPEPTPEIKEEVLEILKVALLCLHSDPQARPTMLSI 1040          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.931e-26
Identity = 74/179 (41.34%), Postives = 100/179 (55.87%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPV-QPLDDGGDFATWGR-------NYIRDHFLT---PGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LG A GLAYLH+DC P I  RDIK  NIL+D   E H+GDFGLA+++D     S + V G+ GYIAPE A+      + D+ SYGVVLLEL+T +  V +   +  D  +W R       N + D   T   P + D  L   D S  + ++ V ++AL CT   P   P+MR+ V +L
Sbjct:  933 LGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLD-DSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVDKSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPILVDELL---DSSLREQVMQVTELALSCTQQDPAMRPTMRDAVKLL 1107          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.098e-25
Identity = 64/171 (37.43%), Postives = 100/171 (58.48%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQP---LDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            +GAA GLA+LHH   P I  RDIK++NILLD  FE  V DFGLA++I   +    + +AG++GYI PEY  + + + K D+ S+GV+LLEL+TG+ P  P     +GG+   W    I        I    ++   K++    + +L++A++C + +P   P+M +V+  L
Sbjct: 1022 VGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNS---QLRLLQIAMLCLAETPAKRPNMLDVLKAL 1189          
The following BLAST results are available for this feature:
BLAST of CB290601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
SERK4_ARATH1.174e-2743.02Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
RPK1_ARATH2.002e-2737.50Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH4.460e-2742.44Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_DAUCA4.460e-2742.60Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
SERK5_ARATH7.607e-2742.44Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
Y1743_ARATH2.213e-2636.90Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH4.931e-2640.34Probable LRR receptor-like serine/threonine-protei... [more]
Y4885_ARATH4.931e-2641.57Probable LRR receptor-like serine/threonine-protei... [more]
PEPR1_ARATH4.931e-2641.34Leucine-rich repeat receptor-like protein kinase P... [more]
EXS_ARATH1.098e-2537.43Leucine-rich repeat receptor protein kinase EXS OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ce03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ce03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290601 ID=CB290601; Name=CB290601; organism=Citrus sinensis; type=EST; length=776bp
TTTTTTTTTTTTTTTTTACACCACCGTTGCTGAACTTTATTGAGGGCAAA
GGGATTTACACAACCCCCAAAGAGCATTAATTTTATTTGCTGATGGATAA
ATGTACATGATCTCATCAACTGGCTATTGCAAATAATGTGAGGAAAAATC
GGCACCAATTAAAACCATTTTGGGTAATAAAATCCCCAAAATGGTTACCT
ACTTTCATGAATCTGAGGAAAATCATAAGTTGGAAAAAAATTAAATCTGC
CTTCTCCCTCATTAAACTCAATAAGCATTGATACAACTTCCCGCATTGAG
GGGCTATCAAAAGGAGAAATGCTTGTGCACATCAAAGCAACTTTTAAAAC
AAAAATCATGGGGTCAACTGTACTTTTATCTTCAAAATTTAATCGCGTAT
CGAATATCCCCGGAGTCAAAAAATGGTCCCGAATATAATTCCTCCCCCAA
GTAGCAAAATCCCCTCCATCATCTAATGGCTGTACAGGAGTTCTTCCAGT
TAACAACTCCAACAGGACAACACCATAGCTGGAAATGTCCCATTTTTCCG
AAACCTTCATAGTGTATGCATATTCAGGGGCAATGTAACCATATGATCCT
GCAACTGCTGACATTGATTTAAATTGAGGCATGTCAATCACTTTAGCTAA
TCCAAAATCACCAACATGCGCTTCAAATTTATCATCAAGTAGAATATTAT
TAGACTTGATATCACGGGGAAAAATTCTTGGTTTGCAATCATGATGGAGG
TAAGCGAGACCCTCGGCAGCTCCAAG
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