CB290601

Overview
NameCB290601
Unique NameCB290601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.664e-23
Identity = 66/170 (38.82%), Postives = 102/170 (60.00%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGR--TPVQPLDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LG A+GL +LH + + +I  RDIK++N+LLD    A + DFGLAK+ D       + +AG+ GY+APEYA    ++EK D+ S+GVV LE+++G+  T  +P +D      W    +++      + D  L   D S  + M+ +L VALMCT+ SP   P+M +VVS++
Sbjct:  784 LGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWA-YVLQERGSLLELVDPTL-ASDYSEEEAML-MLNVALMCTNASPTLRPTMSQVVSLI 950          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.664e-23
Identity = 60/169 (35.50%), Postives = 99/169 (58.58%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRT-PVQPLDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            +G A GLAYLH + + +I  RDIK+ N+LLD +    + DFGLAK+ +       + +AG++GY+APEYA    +++K D+ S+G+V LE++ GR+  ++   +   +       +R+      + D RL  E     +  + ++++A+MCTS  P + PSM EVV ML
Sbjct:  729 IGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNR--EEAMTMIQIAIMCTSSEPCERPSMSEVVKML 895          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.137e-22
Identity = 58/167 (34.73%), Postives = 98/167 (58.68%), Query Frame = -1
Query:  273 GAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 773
            G + GLA+LH +    +   ++ ++NILLD++  AH+ D+GL++++      ++ A AG+ GY APE++     S K D+ S G+++LELLTG++P +P  +G D   W  + +++ + T  +FD  L  E +S  D ++  LK+AL C   SP   P   +VV  L
Sbjct:  643 GISRGLAHLHSN--ENMIHENLTASNILLDEQTNAHIADYGLSRLMTAAAATNVIATAGTLGYRAPEFSKIKNASAKTDVYSLGIIILELLTGKSPGEP-TNGMDLPQWVASIVKEEW-TNEVFDLELMRETQSVGDELLNTLKLALHCVDPSPAARPEANQVVEQL 805          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.532e-22
Identity = 70/175 (40.00%), Postives = 98/175 (56.00%), Query Frame = -1
Query:  270 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSA-VAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDG-----GDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSMLI 776
            L AA+GLA+LH D   ++  RDIK++NILLD  F A + DFGLA+   M +   +S  V G++GY APEY  T  ++ + D+ S+GVVLLELL GR   Q LD        +   W R Y+        I DTRLN + K   +  + +  +A+ C S  P   P+M +VV  L+
Sbjct:  177 LDAAKGLAFLHSD-PVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGR---QALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKP--EGAVRLASIAVQCLSFEPKSRPTMDQVVRALV 345          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.307e-22
Identity = 60/164 (36.59%), Postives = 100/164 (60.98%), Query Frame = -1
Query:  285 AEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTP---VQPLDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREV 767
            A  LAYLH      ++ RD+K+ NILLD+K+ A V DFG ++ I++ Q    + VAG++GY+ PEY  T + ++K D+ S+GVVL+EL+TG  P   ++P ++ G  + +     ++  L   I D+R+  ++  T++ ++ V K+A  C S+     P+MREV
Sbjct:  528 AGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVL--DIVDSRI--KEGCTLEQVLAVAKLARRCLSLKGKKRPNMREV 687          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.319e-22
Identity = 64/170 (37.65%), Postives = 99/170 (58.24%), Query Frame = -1
Query:  273 AEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMS-AVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGDFATWGRNYIRDHFLTPG----IFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 767
            A+GL YLH  CKP +  RD+K+ NILLD+ F+A + DFGL++   +     +S AVAG+ GY+ PEY  T +++EK D+ S+G+VLLE++T R  +Q   +    A W       + LT G    + D RLN + + T   +   L++A+ C + S    P+M +V + L
Sbjct:  680 AQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTREKPHIAAW-----VGYMLTKGDIENVVDPRLNRDYEPT--SVWKALEIAMSCVNPSSEKRPTMSQVTNEL 842          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.368e-22
Identity = 62/167 (37.13%), Postives = 98/167 (58.68%), Query Frame = -1
Query:  282 AAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDM--PQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGDFATWGRNYIRDHFLTPGIFDTRL--NFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVV 770
            AA GL YLH  CKP +  RD+KS NILLD++F+A + DFGL++   +   Q +  + VAG+ GY+ PEY  T ++SEK D+ S+G++LLE++T +  +    +  + A W    I+    T  I D +L  N++  S    +   L+VA+ C + S    P+M +V+
Sbjct:  672 AALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENPNIAEWVTFVIKKGD-TSQIVDPKLHGNYDTHS----VWRALEVAMSCANPSSVKRPNMSQVI 833          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.623e-22
Identity = 64/165 (38.79%), Postives = 91/165 (55.15%), Query Frame = -1
Query:  282 AAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGD--FATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVV 770
            AA+GL YLH  C P I  RD+KS+NILLD    A V DFGL++  +       S   G+ GY+ PEY  + +++EK D+ S+GVVL ELL+G+ PV   D G +     W R+ IR   +  GI D  +    K  ++ +  V +VA  C      + P M+EV+
Sbjct:  712 AAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVC-GIIDPCIASNVK--IESVWRVAEVANQCVEQRGHNRPRMQEVI 873          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 9.623e-22
Identity = 70/172 (40.70%), Postives = 97/172 (56.40%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSA-VAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPV---QPLDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LGAA GLA+LH+  +P++  RD K++NILLD  + A + DFGLA+   M     +S  V G+ GY APEY  T  +S K D+ S+GVVLLELL+GR  +   QP+ +  +   W R Y+ +      + D RL  +   T    I VL  AL C SI     P+M E+V  +
Sbjct:  183 LGAARGLAFLHN-AQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGE-HNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVL--ALDCISIDAKSRPTMNEIVKTM 350          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.623e-22
Identity = 64/172 (37.21%), Postives = 92/172 (53.49%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGDF--ATWGRNYIRD--HFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LG AEGLAYLH     RI  RDIK++N+LLDD+    + DFGLA+   + +    + +AG+ GY+APEY    +++EK D+ S+GV++LE+  G      + + G      W    +      L P + D  L  +          VL+V L+CT  SP   PSM EV+ ML
Sbjct:  419 LGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTRINAFVPETGHLLQRVWNLYTLNRLVEALDPCLKDEFLQVQGSEA--EACKVLRVGLLCTQASPSLRPSMEEVIRML 588          
The following BLAST results are available for this feature:
BLAST of CB290601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
Y1765_ARATH6.664e-2338.82Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH6.664e-2335.50Probable LRR receptor-like serine/threonine-protei... [more]
IMK2_ARATH1.137e-2234.73Probably inactive leucine-rich repeat receptor-lik... [more]
Y3545_ARATH2.532e-2240.00Probable receptor-like protein kinase At3g55450 OS... [more]
WAKLI_ARATH3.307e-2236.59Wall-associated receptor kinase-like 22 OS=Arabido... [more]
Y2289_ARATH4.319e-2237.65Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH7.368e-2237.13Probable LRR receptor-like serine/threonine-protei... [more]
Y1677_ARATH9.623e-2238.79Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH9.623e-2240.70Probable serine/threonine-protein kinase NAK OS=Ar... [more]
CRK42_ARATH9.623e-2237.21Cysteine-rich receptor-like protein kinase 42 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ce03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ce03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290601 ID=CB290601; Name=CB290601; organism=Citrus sinensis; type=EST; length=776bp
TTTTTTTTTTTTTTTTTACACCACCGTTGCTGAACTTTATTGAGGGCAAA
GGGATTTACACAACCCCCAAAGAGCATTAATTTTATTTGCTGATGGATAA
ATGTACATGATCTCATCAACTGGCTATTGCAAATAATGTGAGGAAAAATC
GGCACCAATTAAAACCATTTTGGGTAATAAAATCCCCAAAATGGTTACCT
ACTTTCATGAATCTGAGGAAAATCATAAGTTGGAAAAAAATTAAATCTGC
CTTCTCCCTCATTAAACTCAATAAGCATTGATACAACTTCCCGCATTGAG
GGGCTATCAAAAGGAGAAATGCTTGTGCACATCAAAGCAACTTTTAAAAC
AAAAATCATGGGGTCAACTGTACTTTTATCTTCAAAATTTAATCGCGTAT
CGAATATCCCCGGAGTCAAAAAATGGTCCCGAATATAATTCCTCCCCCAA
GTAGCAAAATCCCCTCCATCATCTAATGGCTGTACAGGAGTTCTTCCAGT
TAACAACTCCAACAGGACAACACCATAGCTGGAAATGTCCCATTTTTCCG
AAACCTTCATAGTGTATGCATATTCAGGGGCAATGTAACCATATGATCCT
GCAACTGCTGACATTGATTTAAATTGAGGCATGTCAATCACTTTAGCTAA
TCCAAAATCACCAACATGCGCTTCAAATTTATCATCAAGTAGAATATTAT
TAGACTTGATATCACGGGGAAAAATTCTTGGTTTGCAATCATGATGGAGG
TAAGCGAGACCCTCGGCAGCTCCAAG
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