CB290612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.274e-25 Identity = 60/118 (50.85%), Postives = 75/118 (63.56%), Query Frame = 2 Query: 65 LKLACAVLLMC-MVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSI--RNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 LKL C V +MC M +G P A AAV+CGQV ++L C+ CC+G++SL S A TT DRQS+CNCLK A I N N LA+GLP +CGVNIPY+ISPS DC ++ Sbjct: 8 LKLVCLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPS--CCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.664e-25 Identity = 60/117 (51.28%), Postives = 79/117 (67.52%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 MA+ + CA + CMV+GAP +A ++CGQV+SSL C+ CCSG+KSLNSAA TTPDRQ+ C CLK+A SI +N A+ P +CGV+IPY+ISPS DCS+V+ Sbjct: 4 MAMMVLCAGVT-CMVVGAPYTEA-LSCGQVSSSLAPCISYLTKGGAVPPA--CCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.173e-25 Identity = 56/118 (47.46%), Postives = 78/118 (66.10%), Query Frame = 2 Query: 56 YMALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 Y A+ V+ +CMV+ PIAQA +TCGQV+S+L C+ CC+GI+++N+ A TTPDRQ+ CNCLK + S+ +N N A+ LP +CGVNIPYQISPS +C+ V+ Sbjct: 3 YSAMTKLALVVALCMVVSVPIAQA-ITCGQVSSNLAPCIPYVRGGGAVPPA--CCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.840e-25 Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 2 Query: 47 RTLYMALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 406 R++ +A+ +A +V+ A ++AAVTCGQV+S++ C+ CCSG++SLNSAA TT DR++ CNCLK AA IR LN+ A+ +P +CGV+IPY IS S DCSRV Sbjct: 3 RSMKLAVAIAVVAAAAAVVLAATTSEAAVTCGQVSSAIGPCLSYARGQGSGPSAG-CCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.137e-24 Identity = 55/117 (47.01%), Postives = 76/117 (64.96%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 M+LKLAC V+L C+++ AP+AQ A++ QV SSL C+ C GI+SL SAA DRQ+ C C+K+ A I ++N +A+GLP QC V+IPY+ISPS+DC RV+ Sbjct: 5 MSLKLACVVVL-CLLVDAPLAQGAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.352e-24 Identity = 58/117 (49.57%), Postives = 78/117 (66.67%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 M K+AC VLL CMV+ AP A+A +TCGQVT+ L C+ CC G+K+L +A TT DR++ C CLK+AA +I+ ++LN A+G+P C VNIPY+ISPS DCS V+ Sbjct: 3 MVSKIACFVLL-CMVVVAPHAEA-LTCGQVTAGLAPCLPYLQGRGPLGG---CCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.989e-24 Identity = 58/117 (49.57%), Postives = 77/117 (65.81%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 M K+AC VLL CMV+ AP A+A +TCGQVT+ L C+ CC G+K L +A TT DR++ C CLK+AA +I+ ++LN A+G+P C VNIPY+ISPS DCS V+ Sbjct: 3 MVSKIACFVLL-CMVVVAPHAEA-LTCGQVTAGLAPCLPYLQGRGPLGG---CCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.128e-24 Identity = 51/110 (46.36%), Postives = 73/110 (66.36%), Query Frame = 2 Query: 80 AVLLMCMVMGA-PIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 406 A+++M MV+ P A+A +TCGQVT +L C+ CC+ ++ LN+AA TT D+++ C CLK A ++ LNLN A+GLP +CGVNIPY+ISP+ DC+RV Sbjct: 10 AMMVMYMVLATTPNAEAVLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.128e-24 Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 131 VTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 +TCGQV+SSL C+ CC+G++SLN+AA TT DRQ+ CNCLK+A SI+ LNLNLA+GLP +CGV++PY+ISPS DC V+ Sbjct: 1 ITCGQVSSSLAPCINYLRAGGVVPAN--CCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23 Identity = 60/117 (51.28%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 M K+AC VLL CMV+ AP A+A +TCGQVTS+L C+ CC G+K L A TT DRQ+ C CLK+AA S L+L A+ LP C VNIPY+ISPS DCS+V+ Sbjct: 3 MVNKIACFVLL-CMVVVAPHAEA-LTCGQVTSTLAPCLPYLMNRGPLGG---CCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ 114 The following BLAST results are available for this feature:
BLAST of CB290612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290612 ID=CB290612; Name=CB290612; organism=Citrus sinensis; type=EST; length=625bpback to top |