CB290612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.240e-21 Identity = 53/116 (45.69%), Postives = 71/116 (61.21%), Query Frame = 2 Query: 65 LKLACAVLLMCMVMGAPI-AQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 +KLAC VL CM++ PI + AA++CG V+ + C+ CC+G+ +LN+ A TTPDRQ C CL AA S LN A+GLP+ CGVNIPY+IS S +C+ VR Sbjct: 5 MKLACLVLA-CMIVAGPITSNAALSCGTVSGYVAPCIGYLTQNGPLPRG--CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.234e-20 Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = 2 Query: 77 CAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 C VL +C+V AA++CG V SL C CC+G+K+LNS A TTPDRQ C C+++ A SI LN +LASGLP +CGV+IPY IS S +C+ ++ Sbjct: 10 CLVLTVCIVASV---DAAISCGTVAGSLAPCATYLSKGGLVPPS--CCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.611e-20 Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 406 M + + C V + CMV A A A ++CGQVTS L C CC+G++ LN+AA TTPDRQ+ C CLK + +NLN A+ LP +CG++I Y+I+P++DCS++ Sbjct: 4 MVMNVLC-VAVACMVFSASYADA-ISCGQVTSGLVPCFGYLAAGGPVPPA--CCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.611e-20 Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 2 Query: 65 LKLACAVLLMCMVMGAPI-AQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 +KLAC ++ CM++ PI + AA++CG V+ + C+ CCSG+ SLN+ A TTPDRQ C CL AA ++ +N+ A+GLP+ CGVNIPY+IS + +C+ V+ Sbjct: 5 MKLAC-LIFACMIVAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTA-CCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.611e-20 Identity = 51/117 (43.59%), Postives = 73/117 (62.39%), Query Frame = 2 Query: 65 LKLACAVLLMCMVMGAPI-AQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSI-RNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 +KLAC VL CM++ PI A A+TCG V S++ C+ CC+G+ LNS A TTPDRQ C CL+TAA ++ NLN A+G+P+ CGV++P+ IS + +C+ V+ Sbjct: 5 MKLACLVLA-CMIVAGPITANRALTCGTVNSNVAPCIGYITQGGTLPGA--CCTGVSKLNSMARTTPDRQQACRCLETAARALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.123e-20 Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = 2 Query: 77 CAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 C +LL+ ++G +A+TCGQV S L +C+ CC+G+++LN+ A TTPDRQ+ CNCLK+ LN + +G+P +CGVNIPY I DC++VR Sbjct: 8 CFLLLLAFLIGTA---SAITCGQVDSDLTSCLGYARKGGVIPPG--CCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.044e-19 Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 65 LKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 +KLA V L CM + A+TC QV+++L C+ CC+GIK++N A TTPDRQ+ CNCLK AGS+ +N A LP +CGVN+PY+IS S +C+ V+ Sbjct: 7 IKLALVVAL-CMAVSVA---HAITCSQVSANLAPCINYVRSGGAVPPA--CCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK 115
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.364e-19 Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 131 VTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 +TCGQV+SSL C+ CC+GI+++N+ A TTPDR++ CNCLK +GSI +N N A+ LP +CGVNIPY+IS S +C+ V+ Sbjct: 1 ITCGQVSSSLAPCIGYVRGGGAVPPA--CCNGIRNVNNLARTTPDRRTACNCLKQLSGSISGVNPNNAAALPGKCGVNIPYKISASTNCATVK 91
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.327e-19 Identity = 49/116 (42.24%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 406 MAL AV+ +V A A AAV+CG VTSS+ C+ CCSG+++LN A+++ DR++ C+CLK A S RNLN+ A+ +P +CGV++ + IS SVDCS++ Sbjct: 8 MALVALVAVVAAAVV--AERASAAVSCGDVTSSIAPCLSYVMGRESSPSSS-CCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.327e-19 Identity = 49/116 (42.24%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 406 MAL AV+ +V A A AAV+CG VTSS+ C+ CCSG+++LN A+++ DR++ C+CLK A S RNLN+ A+ +P +CGV++ + IS SVDCS++ Sbjct: 8 MALVALVAVVAAAVV--AERASAAVSCGDVTSSIAPCLSYVMGRESSPSSS-CCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120 The following BLAST results are available for this feature:
BLAST of CB290612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290612 ID=CB290612; Name=CB290612; organism=Citrus sinensis; type=EST; length=625bpback to top |