CB290612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19 Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 2 Query: 62 ALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 A +L L+ M++ A A AA++CGQV+S+L C+ CCSG+K L AA +T D+Q+ C C+K+AAG LN A+G+P CGV++PY IS SVDCS++R Sbjct: 6 ASQLVLVALVAAMLLVA--ADAAISCGQVSSALSPCISYARGNGAKPPAA-CCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.969e-19 Identity = 51/119 (42.86%), Postives = 71/119 (59.66%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIA--QAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 MA A ++L+ MV I AA++CGQV+S+L C+ CCSG+K L AA +T D+Q+ C C+K+AAG LN A+G+P CGV++PY IS SVDCS++R Sbjct: 1 MARAAATQLVLVAMVAAMLIVATDAAISCGQVSSALSPCISYARGNGAKPPVA-CCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19 Identity = 51/117 (43.59%), Postives = 71/117 (60.68%), Query Frame = 2 Query: 65 LKLACAVLLMCMVMGAPI-AQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSI-RNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 +KLAC VL CM++ PI A A ++CG V +L C+ CC+G+ +L + A+TTPDRQ C CL++AA ++ LN A+GLP C VNIPY+IS S +C+ VR Sbjct: 5 MKLACMVLA-CMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQG--CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19 Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIA--QAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 MA A ++L+ MV + AA++CGQV+S+L C+ CCSG+K L AA +T D+Q+ C C+K+AAG LN A+G+P CGV++PY IS SVDCS++R Sbjct: 1 MARAAATQLVLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVA-CCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 8.841e-19 Identity = 47/109 (43.12%), Postives = 64/109 (58.72%), Query Frame = 2 Query: 80 AVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 406 AV L+ M+ P A A+ CG V S ++ C+ CC G+K+L++ A + DRQS CNCLK A I NLN + A +P +CGVN+PY IS ++DCSRV Sbjct: 7 AVALVLMLAAVPRAAVAIDCGHVDSLVRPCLSYVQGGPGPSGQ--CCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.508e-18 Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 62 ALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 406 A KLA L+ M++ A A AA+TCGQV+S+L C CCSG+K L A +T D+Q+ C CLK+ AG+ N A+G+P +CGV++PY IS SVDCS++ Sbjct: 6 ATKLALVALVAAMLLVA--ADAAITCGQVSSALGPCAAYAKGSGTSPSAG-CCSGVKRLAGLARSTADKQATCRCLKSVAGAY---NAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP4_ARATH (Non-specific lipid-transfer protein 4 OS=Arabidopsis thaliana GN=LTP4 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.970e-18 Identity = 49/111 (44.14%), Postives = 66/111 (59.46%), Query Frame = 2 Query: 77 CAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 C VL + +V AA+TCG V SSL C+ CC+G+K LN A TTPDRQ C CL++AA + +N +LASGLP +CGV+IPY IS S +C+ ++ Sbjct: 10 CFVLTVFIVASV---DAAITCGTVASSLSPCLGYLSKGGVVPPP--CCAGVKKLNGMAQTTPDRQQACRCLQSAA---KGVNPSLASGLPGKCGVSIPYPISTSTNCATIK 112
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.970e-18 Identity = 47/118 (39.83%), Postives = 71/118 (60.17%), Query Frame = 2 Query: 59 MALKLACAVLLMCMVMGAPIA--QAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 406 MA A ++L+ MV + AA++CGQV+S+L C+ CCSG+K L AA +T D+Q+ C CLK+ A SI+ +N+ SG+P +CGV++P+ IS S DC++V Sbjct: 1 MARAAATQLVLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVA-CCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.360e-18 Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 131 VTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 +TCGQV+S+L C+ CC+GI+++N+ A TTPDRQ+ CNCLK + S+ +N N A+ LP +CGV+IPY+IS S +C+ V+ Sbjct: 1 ITCGQVSSALAPCIPYVRGGGAVPPA--CCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCATVK 91
BLAST of CB290612 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.388e-18 Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 131 VTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 409 +TCGQV+S+L C+ CC+GI+++N+ A TT DR++ CNCLK +GSI +N N A+ LP +CGVN+PY+IS S +C+ V+ Sbjct: 1 ITCGQVSSNLAPCINYVKGGGAVPPA--CCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNNAAALPGKCGVNVPYKISASTNCATVK 91 The following BLAST results are available for this feature:
BLAST of CB290612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290612 ID=CB290612; Name=CB290612; organism=Citrus sinensis; type=EST; length=625bpback to top |