CB290624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFF_ARATH (Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 PE=2 SV=2) HSP 1 Score: 236.113 bits (601), Expect = 1.853e-61 Identity = 119/207 (57.49%), Postives = 150/207 (72.46%), Query Frame = 1 Query: 220 SGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL 837 +G KRV L +ELWHACAGPLV++P G RV YFPQGH EQV ASTN+ D +P Y L +++C++ NV + A+ +TDEV+AQ+TL P + Q++ R + FCKTLTASDTSTHGGFSV RR A++ PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ Sbjct: 16 TGEKRV------LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI 216
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFL_ORYSJ (Auxin response factor 12 OS=Oryza sativa subsp. japonica GN=ARF12 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.676e-60 Identity = 111/200 (55.50%), Postives = 148/200 (74.00%), Query Frame = 1 Query: 241 DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL 837 + + L +ELWHACAGPLV +P G RV YFPQGH EQV ASTN+ + +P Y +LP++++C++ +V + A+ +TDEV+AQ+TL P + Q++N + + FCKTLTASDTSTHGGFSV RR A+ PPLD ++QPP QEL A+D+H EW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ Sbjct: 23 EEKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI 222
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFL_ORYSI (Auxin response factor 12 OS=Oryza sativa subsp. indica GN=ARF12 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.676e-60 Identity = 111/200 (55.50%), Postives = 148/200 (74.00%), Query Frame = 1 Query: 241 DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL 837 + + L +ELWHACAGPLV +P G RV YFPQGH EQV ASTN+ + +P Y +LP++++C++ +V + A+ +TDEV+AQ+TL P + Q++N + + FCKTLTASDTSTHGGFSV RR A+ PPLD ++QPP QEL A+D+H EW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ Sbjct: 23 EEKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI 222
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFN_ARATH (Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14 PE=3 SV=2) HSP 1 Score: 231.491 bits (589), Expect = 4.564e-60 Identity = 111/213 (52.11%), Postives = 149/213 (69.95%), Query Frame = 1 Query: 202 NSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 N+ SG+ + + +Y +LW CAGPL +P+ GE+VYYFPQGHIE VEAST + ++ P+ D PSK+ CRVI +QLK E ++DE +A++TL+P++ Q + + R V+SF K LTASDTS HGGFSV ++HA ECLPPLDMS+ PTQE+ A DLHGN+WRFRHI+RG +RHLL GW+ F +SK+LV GD +F+R Sbjct: 8 NTQPELSGI--IDGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNQNQF----RPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVR 214
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFE_ORYSJ (Auxin response factor 5 OS=Oryza sativa subsp. japonica GN=ARF5 PE=2 SV=2) HSP 1 Score: 231.491 bits (589), Expect = 4.564e-60 Identity = 113/197 (57.36%), Postives = 141/197 (71.57%), Query Frame = 1 Query: 253 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 A+ +ELWHACAGPLV++P G V YFPQGH EQV AS + D +P Y +LPSK++C + V L A+PDTDEV+AQ+TL P + + A++ R + FCKTLTASDTSTHGGFSV RR A++ PPLD S QPP QEL A+D+H N W FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ I +R Sbjct: 40 AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVR 236
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFC_ARATH (Auxin response factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.734e-59 Identity = 114/201 (56.72%), Postives = 140/201 (69.65%), Query Frame = 1 Query: 265 ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEK--------EXXXXXXXRFHV-HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 ELWHACAGPL+++P+ G V YFPQGH+EQ D +Y LP + CR+++V+L AE TDEV+AQV+LLPES E V + E R + H FCKTLTASDTSTHGGFSV RR A++C PPLD S+ P+QEL A+DLHG EWRFRHI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLR Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLR 247
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFG_ARATH (Auxin response factor 7 OS=Arabidopsis thaliana GN=ARF7 PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 2.265e-59 Identity = 117/226 (51.77%), Postives = 146/226 (64.60%), Query Frame = 1 Query: 163 SCNETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 S N P+EG+ N + +ELWHACAGPL+++P G V YFPQGH EQV AS + D +LPSK++C + NV L A+P+TDEV+AQ+TL P + D +A+ R FCKTLTASDTSTHGGFSV RR A++ P LD S QPP QEL AKD+H N W FRHI+RGQP+RHLL +GWSVFVS+KRL AGD+ +F+R Sbjct: 5 SSNGVSPNPVEGERRN---------------INSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIR 215
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSJ (Auxin response factor 16 OS=Oryza sativa subsp. japonica GN=ARF16 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.863e-59 Identity = 109/196 (55.61%), Postives = 142/196 (72.45%), Query Frame = 1 Query: 253 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 A+ +ELWHACAGPLV++P G V YFPQGH EQV AS ++ D LPSK++C+++++ L A+ +TDEV+AQ+TL P + D +A+ + FCKTLTASDTSTHGGFSV RR A++ PPLD + QPP QEL AKDLH W+FRHI+RGQP+RHLL +GWSVFVS+KRL+AGD+ +F+R Sbjct: 20 AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIR 215
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSI (Auxin response factor 16 OS=Oryza sativa subsp. indica GN=ARF16 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.124e-58 Identity = 108/196 (55.10%), Postives = 141/196 (71.94%), Query Frame = 1 Query: 253 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 A+ +ELWHACAGPLV++P G V YFPQGH EQV AS ++ D LPSK++C+++++ L A+ +TDEV+ Q+TL P + D +A+ + FCKTLTASDTSTHGGFSV RR A++ PPLD + QPP QEL AKDLH W+FRHI+RGQP+RHLL +GWSVFVS+KRL+AGD+ +F+R Sbjct: 20 AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLICKLLSLTLHADSETDEVYVQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIR 215
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSJ (Auxin response factor 11 OS=Oryza sativa subsp. japonica GN=ARF11 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.124e-58 Identity = 111/209 (53.11%), Postives = 146/209 (69.86%), Query Frame = 1 Query: 217 TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 T G K+V + +ELWHACAGPLV +P+ G VYYFPQGH EQV A+T ++ + ++P Y +LPS++LC+V N+ L A+ DTDEV+AQ+TL P +++ + + FCK LTASDTSTHGGFSV RR A++ P LD S QPP QEL +DLH N W FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R Sbjct: 29 TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQPVNSETDVFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIR 231 The following BLAST results are available for this feature:
BLAST of CB290624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290624 ID=CB290624; Name=CB290624; organism=Citrus sinensis; type=EST; length=840bpback to top |