CB290624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSI (Auxin response factor 11 OS=Oryza sativa subsp. indica GN=ARF11 PE=2 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 1.124e-58 Identity = 111/209 (53.11%), Postives = 146/209 (69.86%), Query Frame = 1 Query: 217 TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 T G K+V + +ELWHACAGPLV +P+ G VYYFPQGH EQV A+T ++ + ++P Y +LPS++LC+V N+ L A+ DTDEV+AQ+TL P +++ + + FCK LTASDTSTHGGFSV RR A++ P LD S QPP QEL +DLH N W FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R Sbjct: 29 TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQPVNSETDVFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIR 231
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFE_ARATH (Auxin response factor 5 OS=Arabidopsis thaliana GN=ARF5 PE=1 SV=3) HSP 1 Score: 226.483 bits (576), Expect = 1.468e-58 Identity = 110/202 (54.46%), Postives = 143/202 (70.79%), Query Frame = 1 Query: 238 GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 G + + +ELWHACAGPLV +P+ G VYYF QGH EQV ST + A Q+P Y +LPS+++C+V NV L A+ D+DE++AQ++L P ++ + + + FCKTLTASDTSTHGGFSV RR A++ PPLD S QPPTQEL +DLH N W FRHI+RGQP+RHLL +GWS+FV SKRL AGD+ +F+R Sbjct: 45 GTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 246
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFU_ORYSJ (Auxin response factor 21 OS=Oryza sativa subsp. japonica GN=ARF21 PE=2 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 1.917e-58 Identity = 112/196 (57.14%), Postives = 141/196 (71.94%), Query Frame = 1 Query: 265 ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQ---DENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 ELW+ACAGPLV++P +G + YFPQGH EQV AS + AD Q+P Y +LPSK++C + +V + A+PDTDEV+A++TL P SN D+ + R FCKTLTASDTSTHGGFSV RR A+ P LD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+FVS KRL+AGD+ +F+R Sbjct: 25 ELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHSVTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIR 220
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFL_ARATH (Auxin response factor 12 OS=Arabidopsis thaliana GN=ARF12 PE=2 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 3.271e-58 Identity = 109/213 (51.17%), Postives = 146/213 (68.54%), Query Frame = 1 Query: 202 NSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 N+ SG+ + + +Y +LW CAGPL +P+ GE+VYYFPQGHIE VE ST + ++ P+ DLPSK+ CRVI + LK E ++DE +A++TL+P++ Q + E R V+SF K LTASDTS HGGF V ++HA ECLP LDMS+ P QEL A DLHGN+WRF H +RG P+RHLL +GW+ F +SK+LVAGD +F+R Sbjct: 8 NAQPELSGI--IDGSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNENQF----RPLVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVR 214
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFV_ARATH (Auxin response factor 22 OS=Arabidopsis thaliana GN=ARF22 PE=2 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 1.243e-57 Identity = 110/213 (51.64%), Postives = 149/213 (69.95%), Query Frame = 1 Query: 202 NSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 N+ SG+ + + +Y +LW CAGPL +P+ GE++YYFPQG+IE VEAST + ++ P+ DLPSK+ CRVI +QLK E ++DE +A++TL+P++ Q + E R V+SF K LTASDTS GGF V ++HA ECLPPLDMS+ PTQEL A DLHGN+WRF H +RG P+RHLL +GW+ F +SK+LVAGD +F+R Sbjct: 8 NAQPELSGI--IDGSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQF----RPLVNSFTKVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVR 212
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFS_ARATH (Auxin response factor 19 OS=Arabidopsis thaliana GN=ARF19 PE=1 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 2.120e-57 Identity = 109/193 (56.48%), Postives = 135/193 (69.95%), Query Frame = 1 Query: 262 TELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 ++LWHACAGPLV++P G V YFPQGH EQV AS + D +LPSK++C + +V L A+ +TDEV+AQ+TL P + D A+ R FCKTLTASDTSTHGGFSV RR A++ PPLD S QPP QE+ AKDLH W FRHI+RGQP+RHLL +GWSVFVS+KRL AGD+ +F+R Sbjct: 22 SQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVR 214
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFU_ARATH (Putative auxin response factor 21 OS=Arabidopsis thaliana GN=ARF21 PE=2 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 4.723e-57 Identity = 106/213 (49.77%), Postives = 148/213 (69.48%), Query Frame = 1 Query: 202 NSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 N+ SG+ + + +Y +LW CAGPL +P+ GE VYYFPQG+IE V+AST + ++ P+ DLPSK+ CRVI + LK E ++DE++A++TL+P++ Q + E R V+SF K LTASDTS +GGFSV ++HA ECLPPLDMS+ P QE+ A DLH N+WRFRH +RG P+RH L +GW+ F++SK+LV GD +F+R Sbjct: 8 NAQPKLSGI--IDGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRF----RPLVNSFTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVR 214
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFO_ARATH (Putative auxin response factor 15 OS=Arabidopsis thaliana GN=ARF15 PE=3 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 3.061e-56 Identity = 110/223 (49.33%), Postives = 150/223 (67.26%), Query Frame = 1 Query: 172 ETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 ETG + N+ SG+ + + +Y +LW CAGPL +P+ GE+VYYFPQG+IE VEAST + ++ P+ DLPSK+ CRVI + LK E ++DE +A++TL+P++ Q + E R V+SF K LTASD S +G FSV ++HA ECLPPLDMS+ P QEL A DLHGN+W FRH +RG P+RHLL +GW+ F +SK+LV GD +F+R Sbjct: 2 ETGNVV----NAQPELSGI--IDRSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAKITLMPDTTQVVIPTQNENQF----RPLVNSFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFTTSKKLVKGDVIVFVR 214
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFO_ORYSJ (Auxin response factor 15 OS=Oryza sativa subsp. japonica GN=ARF15 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.385e-55 Identity = 114/235 (48.51%), Postives = 147/235 (62.55%), Query Frame = 1 Query: 151 VSMKSCNETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAV---EKEXXXXXXXRFH--VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 + + + E E +N ++ R G A+ ELWHACAGP+ +PR+G V Y PQGH+E + + A +P + CRV++V L A+ TDEV+AQ++L+PE + E E RF H FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLH EWRFRHI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLR Sbjct: 4 IDLNTVEEDEEEAAEEVAANGSSPAPARAG----AVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAA----VPPHVFCRVVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLR 230
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFT_ARATH (Auxin response factor 20 OS=Arabidopsis thaliana GN=ARF20 PE=2 SV=3) HSP 1 Score: 214.542 bits (545), Expect = 5.773e-55 Identity = 108/223 (48.43%), Postives = 148/223 (66.37%), Query Frame = 1 Query: 172 ETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 ETG + N+ SG+ + + +Y +LW CAGPL +P+ GE VYYFPQG+IE V+AST + ++ P+ DLPSK+ CRVI + LK E ++DE +A++TL+P++ Q + E R V+SF K LTASDTS +GGF V ++HA ECLPPL + P QEL AKDLHGN+WRFRH +RG P+RH L +GW+ F +SK+LV GD +F+R Sbjct: 2 ETGNVV----NAQPELSGI--IDGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQSE----NQFRPLVNSFTKVLTASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVR 210 The following BLAST results are available for this feature:
BLAST of CB290624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290624 ID=CB290624; Name=CB290624; organism=Citrus sinensis; type=EST; length=840bpback to top |