CB290625

Overview
NameCB290625
Unique NameCB290625
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:783..1518. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290625 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.846e-19
Identity = 52/133 (39.10%), Postives = 72/133 (54.14%), Query Frame = -2
Query:  350 GGVEREKDYPYTGTDGGSCKFDKSK----IGAAVSNFRVISSDEDQMGANLVKHGPLAVGINSVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVC 736
            G +  E  YPY   +G   +   S     +GA +    +I S E  M A L K+GP+A+ +++    +Y  GV    I GK L+HGVL+VGY  +G  P       YW+IKNSWG +WGE GY ++ MG N C
Sbjct:  206 GHLHTEDSYPYVSGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTGEVP-------YWVIKNSWGGDWGEQGYVRVVMGVNAC 330          
BLAST of CB290625 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.846e-19
Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = -2
Query:  344 GVEREKDYPYTGT-DGGSCKFDKSKIGAAVSNFRVISSDEDQMGANLVKHGPLAVGINSVWMQTYIGGV--SCPYICG-KYLDHGVLIVGYGSS----------GFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVCGV 733
            G+  EKDYP+ G      C   K K  A + +F ++S++E  +   L  HGP+ V IN   +Q Y  GV  + P  C  + +DH VL+VG+G              +  R    PYWI+KNSWG +WGE GY+++  G N CGV
Sbjct:  206 GLASEKDYPFQGDRKPHRCLAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILKNSWGAHWGEKGYFRLYRGNNTCGV 349          
BLAST of CB290625 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.149e-19
Identity = 54/133 (40.60%), Postives = 76/133 (57.14%), Query Frame = -2
Query:  344 GGVEREKDYPYTGTDGGSCKFDKSKIGAAVSN-FRVISSDEDQMGANLVKHGPLAVGINSVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVCGV 736
            GGVE E DYPY G +  +C+   SK+   +S+ ++    DE ++   L K+GP+AV I+ V +  Y  G++   +C    L+H VL+VGYG            PYWI KNSWG NWGENGY++     N CG+
Sbjct:  204 GGVEHEIDYPYQGIEY-ACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIIDYRSGIAT--VCNDNGLNHAVLLVGYGIEN-------DTPYWIFKNSWGSNWGENGYFRARRNINACGM 326          
BLAST of CB290625 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.149e-19
Identity = 55/144 (38.19%), Postives = 79/144 (54.86%), Query Frame = -2
Query:  326 GGVEREKDYPYTGTDGGSCKFDKSKIGAAVSNFRVIS---SDEDQMGANLVKHGPLAVGINSVW-MQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSF 736
            GG++ EK YPYTG D  +CKF    +G  V N   I+    DE +    LV+  P+++    +   + Y  GV     CG     ++H VL VGYG          G PYW+IKNSWG +WG+ GY+K+ MG+N+CG+ +  S+
Sbjct:  221 GGLDTEKAYPYTGKDE-TCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVED-------GVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASY 354          
BLAST of CB290625 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.196e-18
Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = -2
Query:  344 GGVEREKDYPYTGTDGGSCKFDKSKIGAAVSN-FRVISSDEDQMGANLVKHGPLAVGINSVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVCGV 736
            GGV+ E DYPY G+DG +C+ D +K    V   +R I+  E+++   L   GP+ V I++  +  Y  G+     C  Y  +H VL+VGYG            PYWI+KN+WGE+WGE GY+++    N CG+
Sbjct:  191 GGVQAENDYPYEGSDG-NCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAIDASDIVNYRRGIM--RYCSNYGFNHAVLLVGYGVEN-------NVPYWILKNTWGEDWGEQGYFRVQQNINACGI 313          
BLAST of CB290625 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 53/144 (36.81%), Postives = 79/144 (54.86%), Query Frame = -2
Query:  326 GGVEREKDYPYTGTDGGSCKFDKSKIGAAVS---NFRVISSDEDQMGANLVKHGPLAVGINSV-WMQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSF 736
            GG++ E+ YPYTG +G  C +    +G  V    N  + + DE +    LV+  P++V    +   + Y  GV     CG     ++H VL VGYG          G PYW+IKNSWG +WG+NGY+K+ MG+N+CG+ +  S+
Sbjct:  225 GGLDTEEAYPYTGVNG-ICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVR--PVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVEN-------GVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASY 358          
BLAST of CB290625 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = -2
Query:  323 REKDYPYTGTDGGSCKFDKSKIGAAVSNFRV--ISSDEDQMGANLVKHGPLAVGINSVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSFV 724
            ++ +YP+   +G    F  S  G ++  +     S  ED+M   L+  GPL V +++V  Q Y+GG+   +      +H VLI G+  +G         PYWI++NSWG +WG +GY  + MG NVCG+   VS +
Sbjct:  191 KDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHHCSSGEANHAVLITGFDKTG-------STPYWIVRNSWGSSWGVDGYAHVKMGSNVCGIADSVSSI 319          
BLAST of CB290625 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = -2
Query:  326 GGVEREKDYPYTGTDGGSCKFDKSKIGAAVSNFRVI-SSDEDQMGANLVKHGPLAVGINSVW--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVSF 736
            GG++ EK YPY   D  SC F+K  +GA    F  I   DE +M   +   GP++V I++     Q Y  GV + P    + LDHGVL+VG+G+         G+ YW++KNSWG  WG+ G+ K+   + N CG+ S  S+
Sbjct:  234 GGIDTEKSYPYEAIDD-SCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDE------SGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSY 368          
BLAST of CB290625 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.665e-18
Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = -2
Query:  326 GGVEREKDYPYTGTDGGSCKFDKSKIGAAVS---NFRVISSDEDQMGANLVKHGPLAVGINSVW-MQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSF 736
            GG++ E+ YPY G +G  CKF    +G  V    N  + + DE +    LV+  P++V    +   + Y  GV     CG     ++H VL VGYG          G PYW+IKNSWG +WG+ GY+K+ MG+N+CGV +  S+
Sbjct:  223 GGLDTEESYPYQGVNG-ICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR--PVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVED-------GVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASY 356          
BLAST of CB290625 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.665e-18
Identity = 51/140 (36.43%), Postives = 73/140 (52.14%), Query Frame = -2
Query:  326 GGVEREKDYPYTGTDGGSCKFDKSKIGAAVSNFRVISSDEDQMGANLVKHGPLAVGIN--SVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVSF 736
            GG+E E  YPY   +G  C+++     A ++ F V+   ED +   +   GP+A G++  S   + Y  GV     C  Y++H VL+VGYG  G       G  YW+IKNSWG+ WG  GY KI   R N C + S+  +
Sbjct:  205 GGLEAEATYPYERKEG-VCRYNPKNSSAKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVLVVGYGFEGNET---DGNNYWLIKNSWGKRWGLRGYMKIAKDRNNHCAIASLAQY 340          
The following BLAST results are available for this feature:
BLAST of CB290625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CYSP2_LEIPI1.846e-1939.10Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CATW_MOUSE1.846e-1937.50Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATV_NPVST3.149e-1940.60Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
ALEU_ARATH3.149e-1938.19Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CATV_NPVHC1.196e-1838.35Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
ORYC_ORYSJ2.041e-1836.81Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATO_HUMAN2.041e-1833.82Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
CATL_DROME2.041e-1838.03Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CYSP2_MAIZE2.665e-1837.50Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATQ_RAT2.665e-1836.43Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cf05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cf05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290625 ID=CB290625; Name=CB290625; organism=Citrus sinensis; type=EST; length=737bp
TTTTATTTTTTTTTTTTTTTAAAATATAACATTATAATATTTCTACAAGC
CTGCCCAATATAAAAAGAAAATATTAATCCCATCTTCAATAACAATTCTG
TAGCATGGTTAACTATAAAATGGATAAATATTACATTCTGACATGACATA
TGCTTAAATATTACAAAAACATATAAAGTTCATGCCTCAACCCACGCATG
TAGGCATCCTTATAATTGCAAACGGCTATTTAAAAGGATATCCAATAATA
TCTTCGTATATAACCTCCACTTGCCTAGCACAACCTCCATAATGTCTAAC
TTGAGGTTGTATGGACACCACCTACAAATGAAACCATGGAGTCAACCCCA
CAAACATTGCGACCCATGCAAATCTTATAATATCCATTCTCTCCCCAGTT
CTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCCCCTTGAAACGGA
TCGGGGCGAAACCTGAAGATCCATACCCCACGATAAGCACTCCATGATCC
AAATACTTCCCGCAAATGTATGGGCATGAAACTCCTCCAATATATGTTTG
CATCCAAACGGAATTGATACCCACTGCCAAAGGGCCATGTTTCACCAAAT
TTGCACCCATTTGATCTTCATCAGAGGAAATAACCCTGAAATTAGATACA
GCTGCACCAATTTTGCTTTTGTCAAATTTGCAGGAACCACCGTCGGTCCC
AGTGTAAGGGTAGTCCTTCTCTCGCTCAACCCCACCA
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