CB290626

Overview
NameCB290626
Unique NameCB290626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.585e-25
Identity = 78/228 (34.21%), Postives = 117/228 (51.32%), Query Frame = 2
Query:  140 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLN-RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 808
            D +L+ E  +  +K K+ K Y+ +EE   R  V++ N+++ K     +    HG T     F D+T  EFR+  + +    ++     QK   L  N LP   +W+  G VT V+ QG C SCW+FS TGA+EG  F  TG+L+ LS Q LVDC     P+ +     GC  G    A  Y+++ GG+E E  YPY   D GSC++      A ++ F  +  +ED +
Sbjct:   22 DPILDVE--WQKWKIKYGKAYSLEEEGQKR-AVWEDNMKKIKLHNGENGLGKHGFTMEMNAFGDMTLEEFRKVMIEIPVPTVKKGKSVQKR--LSVN-LPKFINWKKRGYVTPVQTQGRCNSCWAFSVTGAIEGQMFRKTGQLIPLSVQNLVDCSR---PQGNW----GCYLGNTYLALHYVMENGGLESEATYPYEEKD-GSCRYSPENSTANITGFEFVPKNEDAL 235          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.704e-25
Identity = 77/217 (35.48%), Postives = 111/217 (51.15%), Query Frame = 2
Query:  167 FSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ-KAPILPTNDLPTDFDWRDHGAVT--GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDED 802
            ++ +K K+++ Y  Q +  YR++VF  NL   RA      + T    + +F+D++  EF + +L L    ++P  A+  A          + DW D+  V    VK+QG+CGSCW+FSA GALE    +       LSEQ LVDC    D       + GCNGG M+SAFEY+    G+   KDYPYT  D G+CK    +    V  F  I S ++
Sbjct:   26 YANWKMKYNRRYTNQRDEMYRYKVFTDNLNYIRAFYESPEEATFTLELNQFADMSQQEFAQTYLSL----KVPRTAKLNAANSNFQYKGAEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYD-------NDGCNGGWMDSAFEYVAD-NGLAEAKDYPYTAKD-GTCKTSVKRPYTHVQGFKDIDSCDE 229          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.531e-25
Identity = 53/107 (49.53%), Postives = 73/107 (68.22%), Query Frame = 2
Query:  419 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 739
            LP+  DWR  GAV  +K+Q  CGSCW+FSA  A+E  + + TG+L+SLSEQ+LVDCD         +   GCNGG MN+AF+YI+  GG++ +++YPY+    GSCK
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCD---------TASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQ-GSCK 97          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.342e-24
Identity = 72/215 (33.49%), Postives = 104/215 (48.37%), Query Frame = 2
Query:  134 SEDHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 763
            S++ L + E    LF+S   K +K Y   +E  YRF +FK NL+        + +   G+  F+D++  EF+ ++ G         +     +L   D  +P   DWR  GAVT VK+QG+CGSCW+FSA   +EG   + TG L   SEQ+L+DCD             GCNGG   SA + + +  G+     YPY G        +K   AA
Sbjct:   34 SQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR---------SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAA 238          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.752e-24
Identity = 75/232 (32.33%), Postives = 115/232 (49.57%), Query Frame = 2
Query:  149 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-----NRRLRLPADAQKAPILPTN-----DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDED 802
            L+ +  +  +K K+ K Y+ +EE   R  V++ N+++     +   L   T    +  F+D+T  EF+   +G      N   RL   A  +   P +      LP   DWR+ G VT V+ QG C SCW+F  TGA+EG  F  TG+L+ LS Q L+DC            + GC  G   +AF+Y+L  GG+E E  YPY   + G C+++    +A ++ F V+   ED
Sbjct:   23 LSLDVQWQEWKIKYEKLYSPEEEVLKRV-VWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGS-FFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDC-------SKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKE-GVCRYNPKNSSAKITGFVVLPESED 244          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.289e-24
Identity = 76/218 (34.86%), Postives = 104/218 (47.71%), Query Frame = 2
Query:  176 FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 808
            +++K  KTY   EE   R  V++ N +  +          H  T     F DLT  EF +   G  R+       +K  I   +    +P   DWR  G VT VK+QG C S W+FSATG+LEG  F  T  L+ LSEQ L+DC          +   GC+GG M  AF+Y+   GG+  E+ YPY G  G  C++     AA V +F  I   E+ +
Sbjct:   32 WRTKHGKTYNMNEERLKR-AVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQ-----KIKKTHIFQDHQFLYVPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDC-------MGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRG-QGRECRYHAENSAANVRDFVQIPGSEEAL 235          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.989e-24
Identity = 77/219 (35.16%), Postives = 105/219 (47.95%), Query Frame = 2
Query:  176 FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNR----RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 808
            +++K  K Y   EE   R  V++ N +  +          H  T     F DLT +EF +   G  R    R+ +  D Q   +      P   DWR  G VT VK+QG C S W+FSATG+LEG  F  TG LV LSEQ L+DC          +    C+GG M +AF+Y+   GG+  E+ YPY G  G  C++     AA V +F  I   E+ +
Sbjct:   32 WRTKHGKAYNVNEER-LRRAVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFRRQKIKRMHVFQDHQFLYV------PKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDC-------MGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIG-PGRKCRYHAENSAANVRDFVQIPGREEAL 235          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.904e-24
Identity = 74/226 (32.74%), Postives = 114/226 (50.44%), Query Frame = 2
Query:  134 SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 787
            S + +L+ +  + L+K    K Y ++ +   R  +++ NL++     L     VH     +    D+T  E  ++  GL      P+ +     L T +    +P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E         + GC GG M +AF+Y+ + GG++ E  YPY G D  SC ++ +  AA    +  I
Sbjct:   17 SPEEMLDTQ--WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIP---PSRSYSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD-ESCMYNATAKAAKCRGYREI 227          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.099e-24
Identity = 77/233 (33.05%), Postives = 116/233 (49.79%), Query Frame = 2
Query:  140 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSEFRRQFLGLN----RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAA 814
            D  L+AE  +  +K K++K+Y+ +EE   R  V++  L+  K     +    +G T    +F D T  EFR+  + ++    R  +     +   ILP        DWR  G VT V+ QG C +CW+F+ TGA+E      TG+L  LS Q LVDC            ++GC GG   +AF+Y+L  GG+E E  YPY G D G C+++     A ++ F  +   ED + A
Sbjct:   22 DSSLDAE--WQDWKIKYNKSYSLKEEKLKRV-VWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMIEISVWTHREGKSIMKREAGSILPKF-----VDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDC-------SKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKD-GPCRYNPKNSKAEITGFVSLPQSEDILMA 238          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.698e-24
Identity = 73/221 (33.03%), Postives = 108/221 (48.87%), Query Frame = 2
Query:  167 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQ 805
            + L+K  + K Y ++ +   R  +++ NL+      L     VH     +    D+T  E  ++  GL      P+ ++    L   D     P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D         GC GG M +AF+Y+ K  G++ E  YPY G D  SC ++ +  AA    +  I    ++
Sbjct:   27 WDLWKKTYRKQYNSKVDELSRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVP---PSHSRSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD-ESCMYNPTGKAAKCRGYREIPEGNEK 234          
The following BLAST results are available for this feature:
BLAST of CB290626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CATM_MOUSE1.585e-2534.21Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATL1_PARTE2.704e-2535.48Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
ERVB_TABDI3.531e-2549.53Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
PAPA1_CARPA1.342e-2433.49Papain OS=Carica papaya PE=1 SV=1[more]
CATQ_RAT1.752e-2432.33Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
TEST2_RAT2.289e-2434.86Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
TEST2_MOUSE2.989e-2435.16Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATK_MOUSE3.904e-2432.74Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATR_MOUSE5.099e-2433.05Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATK_CANFA8.698e-2433.03Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cf05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cf05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290626 ID=CB290626; Name=CB290626; organism=Citrus sinensis; type=EST; length=820bp
CAAATCGAAAATGGAGCGCCTTATTCTCTCCTCTCTCCTCCTCCTCCTCC
TATCTTCTGTGCTTGCGTCCGCTGTAGCTGTCAACGACGACGATGCTATG
ATCAGACAGGTCGTGCCGTCAGACGGCGAACAATCCGAAGATCATCTCCT
GAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGACTT
ACGCCACCCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCTAAT
CTGCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCACGG
TGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTCC
TTGGCTTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCAAAAGGCTCCT
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCGT
TTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAG
CTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGA
TCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGA
ACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAG
GACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAAG
CAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAAG
ATCAAATGGCTGCAAATTTG
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