CB290626

Overview
NameCB290626
Unique NameCB290626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.259e-14
Identity = 65/255 (25.49%), Postives = 109/255 (42.75%), Query Frame = 2
Query:  131 QSEDHLLNAEHHFSLFK--SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH--GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI---LPTNDLPTDF-------------------DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 817
            + ED + N ++    FK   + +K Y   +E   +F +FK N    K    L+  A++   V +FSD +  E +  F  L        +    P    L  N L ++F                   D+R+ G V   KDQG CGSCW+F++ G +E         ++S SEQ++VDC  +         + GC+GG    +F Y+L+   +    +Y Y   D   C   + K   ++S+   +  ++  +A N
Sbjct:  211 KKEDPINNIKYASKFFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFSDYSEEELKEYFKTLLHVPNHMIEKYSKPFENHLKDNILISEFYTNGKRNEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSKD---------NFGCDGGHPFYSFLYVLQ-NELCLGDEYKYKAKDDMFCLNYRCKRKVSLSSIGAVKENQLILALN 455          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.147e-14
Identity = 61/239 (25.52%), Postives = 105/239 (43.93%), Query Frame = 2
Query:  167 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN---------------------DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE-LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 817
            F  F +K+ ++Y    E   +++ FK N  + K+    +      V +FSD +  +F   F  L   + +P   +K  ++P +                     D+P   D+R+ G V   KDQG CGSCW+F++ G +E  +     + +++LSEQ++VDC            + GC+GG    +F Y ++  G+    DY Y   D   C   + K    +S+   +  +E   A N
Sbjct:  237 FFNFMNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKL---VPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC---------SKLNFGCDGGHPFYSFIYAIE-NGICMGDDYKYKAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALN 462          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: GMSA_DICDI (Gamete and mating-type specific protein A OS=Dictyostelium discoideum GN=gmsA PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.625e-12
Identity = 46/152 (30.26%), Postives = 64/152 (42.11%), Query Frame = 2
Query:  377 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG----ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANL 820
            P     AP  P        DW  +   T ++DQG CGSCW+F+++ ALE  + +  G      + LS Q  V+C             SGCNGG   + F +  K  G+  EKD PY    G SC    S      +N+      +  + A L
Sbjct:  226 PKPTTPAPTTPAPTSTLTVDWTSYQ--TPIRDQGQCGSCWAFASSAALESRYLIKYGTAQKSTLQLSNQNAVNC-----------IASGCNGGWSGNYFNF-FKTPGIAYEKDDPYKAVTGTSCITTSSVARFKYTNYGYTEKTKAALLAEL 363          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.428e-12
Identity = 58/192 (30.21%), Postives = 92/192 (47.92%), Query Frame = 2
Query:  167 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR-QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 739
            F  +  K +K Y T+ E  YR  ++ +N R  +   Q  D T   G  +F  L+  EF   +L  +    +       P +    L    DWR++   T VK+QG C S W+FS + +LE  + +   + ++ S QQ+VDCD+          ++GC+GG    A EY+L+ G V    +YPY   +  +CK
Sbjct:   29 FERWALKNNKFY-TESEKLYRMEIYNSNKRMIEEHNQREDVTYQMGENQFMTLSHEEFVDLYLQKSDS-SVNIMGASLPEVQLEGLGA-VDWRNY---TTVKEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYN---------NTGCSGGYNAYAMEYVLRVGLVS-STNYPYVAKN-QTCK 203          
The following BLAST results are available for this feature:
BLAST of CB290626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CYSP_PLAFA1.259e-1425.49Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
CYSP_PLAVS2.147e-1425.52Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
GMSA_DICDI2.625e-1230.26Gamete and mating-type specific protein A OS=Dicty... [more]
CATL3_PARTE3.428e-1230.21Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cf05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cf05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290626 ID=CB290626; Name=CB290626; organism=Citrus sinensis; type=EST; length=820bp
CAAATCGAAAATGGAGCGCCTTATTCTCTCCTCTCTCCTCCTCCTCCTCC
TATCTTCTGTGCTTGCGTCCGCTGTAGCTGTCAACGACGACGATGCTATG
ATCAGACAGGTCGTGCCGTCAGACGGCGAACAATCCGAAGATCATCTCCT
GAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGACTT
ACGCCACCCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCTAAT
CTGCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCACGG
TGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTCC
TTGGCTTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCAAAAGGCTCCT
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCGT
TTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAG
CTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGA
TCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGA
ACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAG
GACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAAG
CAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAAG
ATCAAATGGCTGCAAATTTG
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