CB290626

Overview
NameCB290626
Unique NameCB290626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.764e-35
Identity = 80/213 (37.56%), Postives = 122/213 (57.28%), Query Frame = 2
Query:  146 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV 769
            LL A ++F  F  KF+K Y+++ E  +RF++F+ NL     +   D TA + + KFSDL+  E   ++ GL+    LP   Q   +  IL  P +  P +FDWR    VT VK+QG CG+CW+F+  G+LE    +    L++LSEQQ +DCD           ++GC+GGL+++AFE  ++ GGV+ E DYPY  T  G C+ + ++    V
Sbjct:   21 LLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLS----LPHQTQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFESAMEMGGVQMESDYPYE-TANGQCRINPNRFVVGV 219          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.916e-35
Identity = 92/239 (38.49%), Postives = 129/239 (53.97%), Query Frame = 2
Query:  143 HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK---RRQLLD---------PTAVHGVTKFSDLTPSEFRRQ----FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQM 808
            +L  +E +F  F  +++K+Y   +E+ YR+ VFK NL +     R  LL+          +A  GV KFSD TP E        FL L++   L  + +     P   LP  +DWRD   VT +KDQG CGSCW+F A G +E  + +   +L+ LSEQQL+DCD           D GCNGGLM+ AF+ +L  GGVE E DYPY G++   C  D  KIA  +++ F     DE+++
Sbjct:   49 NLDQSEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTL-CENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCNGGLMHLAFQELLLMGGVETEADYPYQGSE-QMCTLDNRKIAVKLNSCFKYDIRDENKL 276          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.420e-35
Identity = 86/214 (40.19%), Postives = 121/214 (56.54%), Query Frame = 2
Query:  206 TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-----PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG--ELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANL 820
            + EE + RF +FKAN+             V G+  F+D+T  E+R  +LG       P DA    + P+  +         DWR  GAVT +K+QG CG CWSFSATGA EGA +++ G  +L S+SEQQL+DC        SGS  ++GC GGLM  AFEYI+  GG++ E  YP+T  +   CK++ S I A +S++ +V S  E  +AA +
Sbjct:   42 SSEEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGT------PFDASSLEMTPSEKVFGGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDC--------SGSYGNNGCEGGLMTLAFEYIINNGGIDTESSYPFT-ANTEKCKYNPSNIGAELSSYVNVTSGSESDLAAKV 240          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 6.420e-35
Identity = 87/214 (40.65%), Postives = 113/214 (52.80%), Query Frame = 2
Query:  176 FKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS-CDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDED 802
            FK KF + Y   EE  YR  VF  NL+      K+ +  + T    + +FSD+T  +F     G  +  R  A        P +   T+ DWR  GAVT VKDQG CGSCW+FS TG +EG HFL TG LVSLSEQQLVDC         GS  + GCNGG +  A  Y+   GGV+ E  YPY   D  +C+F+ + I A  + +  I+   +
Sbjct:   23 FKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYKKGPRPAAVFTSTDAAPES---TEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDC-------AGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARD-NTCRFNSNTIGATCTGYVGIAQGSE 225          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.095e-34
Identity = 75/209 (35.89%), Postives = 120/209 (57.42%), Query Frame = 2
Query:  146 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV 769
            LL A  +F  F   F+K Y+++ E  +RF++F+ NL     + L D +A + + KFSDL+  E   ++ GL+  L+     +   +  P +  P +FDWR    VT VK+QG CG+CW+F+  G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E ++  GG++ E DYPY   + G C+ + +K    V
Sbjct:   21 LLKAPSYFEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISKYTGLSLPLQNQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYE-ANNGDCRLNAAKFVVKV 219          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.095e-34
Identity = 82/214 (38.32%), Postives = 123/214 (57.48%), Query Frame = 2
Query:  149 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN 775
            L A ++F  F  +F+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+  E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+CW+F+  G+LE    +   EL++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DYPY   D  +C+ + +K    V +
Sbjct:   22 LKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSKDETIAKYTGLS----LPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ADNNNCRMNSNKFLVQVKD 220          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.440e-34
Identity = 84/229 (36.68%), Postives = 130/229 (56.77%), Query Frame = 2
Query:  143 HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR--AKRRQLLD-PTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQM 808
            +L  A  +F  F   ++K Y +  E + R+ +FK NL    AK     D PTA + + KFSDL+ SE   +F GL+   R+ ++  K  IL  P +  P  FDWR+   VT +K+QGACG+CW+F+   ++E    +    L+ LSEQQL+DCD         S D GCNGGL+++AFE I++ GGV+ E DYP+ G +   C  D+ +  + + V  +  +  +E+++
Sbjct:   48 NLQRAPDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLSIPERV-SNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRN-RRCGLDRHRPYVVSLVGCYRYVMVNEEKL 265          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.440e-34
Identity = 74/209 (35.41%), Postives = 121/209 (57.89%), Query Frame = 2
Query:  146 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV 769
            +L A ++F  F  KF+K+Y+++ E   RF++F+ NL     +   D TA + + KF+DL+  E   ++ GL+  L+     +   +  P +  P +FDWR    VT VK+QG CG+CW+F+  G+LE    +   + ++LSEQQL+DCD           D+GC+GGL+++AFE ++  GG++ E DYPY   + G C+ + +K    V
Sbjct:   21 VLKAPNYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDF---------VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYE-ANNGDCRANAAKFVVKV 219          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.440e-34
Identity = 87/224 (38.84%), Postives = 120/224 (53.57%), Query Frame = 2
Query:  140 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDE 799
            D   +AE H   +KS   + Y T EE ++R  +++ N+R  +          HG    +  F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CGSCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+YI + GG++ E+ YPY   D GSCK+      A  + F  I   E
Sbjct:   22 DQTFSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKD-GSCKYRAEFAVANDTGFVDIPQQE 232          
BLAST of CB290626 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.186e-34
Identity = 90/222 (40.54%), Postives = 125/222 (56.31%), Query Frame = 2
Query:  167 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANL 820
            FS F  ++ K Y + EE   RF VFK NL   +       +    + +F+DLT  EF+R  LG  +     A  + +  +    +P   DWR+ G V+ VK+QG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG++ E+ YPYTG DGG CKF    I   V    N ++ + DE + A  L
Sbjct:   59 FSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGAAQNCS--ATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDC--------AGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGG-CKFSAKNIGVQVRDSVNITLGAEDELKHAVGL 269          
The following BLAST results are available for this feature:
BLAST of CB290626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CATV_NPVOP3.764e-3537.56Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATV_NPVHZ4.916e-3538.49Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CYSP6_DICDI6.420e-3540.19Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CYSP1_HOMAM6.420e-3540.65Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATV_NPVCD1.095e-3435.89Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATV_NPVBM1.095e-3438.32Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CATV_NPVLD2.440e-3436.68Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATV_NPVCF2.440e-3435.41Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATL1_MOUSE2.440e-3438.84Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
ALEUL_ARATH3.186e-3440.54Thiol protease aleurain-like OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cf05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cf05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290626 ID=CB290626; Name=CB290626; organism=Citrus sinensis; type=EST; length=820bp
CAAATCGAAAATGGAGCGCCTTATTCTCTCCTCTCTCCTCCTCCTCCTCC
TATCTTCTGTGCTTGCGTCCGCTGTAGCTGTCAACGACGACGATGCTATG
ATCAGACAGGTCGTGCCGTCAGACGGCGAACAATCCGAAGATCATCTCCT
GAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGACTT
ACGCCACCCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCTAAT
CTGCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCACGG
TGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTCC
TTGGCTTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCAAAAGGCTCCT
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCGT
TTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAG
CTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGA
TCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGA
ACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAG
GACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAAG
CAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAAG
ATCAAATGGCTGCAAATTTG
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