CB290630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_CLOAB (ATP synthase subunit beta OS=Clostridium acetobutylicum GN=atpD PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.800e-53 Identity = 100/168 (59.52%), Postives = 131/168 (77.98%), Query Frame = 2 Query: 296 IGQVCQVIGAVVDVRFD-EGLPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 +G++ QVIG VVD++FD E LP I ++E+ + + +L+ EV QH+G+ +VRTIAM+GT+GL RG +NTG PI+VPVG LGR+ NV+G+ IDE GD+ + Y PIHR AP F EQ+ + ++ TGIKV+DLLAPYQ+GGKIGLFGGAGVGKTVLI ELINN+AK Sbjct: 5 VGKIVQVIGPVVDIKFDAENLPDIYNSIEIDMGDNKKLIAEVEQHVGDDIVRTIAMEGTDGLKRGMEAVNTGKPISVPVGENVLGRLFNVLGQTIDEAGDMNADKYYPIHRPAPTFEEQSVQPEMFETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVLIQELINNIAK 172
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_DESDG (ATP synthase subunit beta OS=Desulfovibrio desulfuricans (strain G20) GN=atpD PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.482e-53 Identity = 107/171 (62.57%), Postives = 131/171 (76.61%), Query Frame = 2 Query: 296 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 IG++ QVIGAVVDV F +G LP IL AL + + + L+ EVAQH+G+ VVRTIAMD TEGLVRG V +TG+PI VPVG +LGRIMNV+G P+DE GD+ LPIHR AP F EQ T ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV++ME+INN+AK Sbjct: 4 IGKITQVIGAVVDVEFADGNLPNILNALVIKNPNNADCPELICEVAQHLGDNVVRTIAMDATEGLVRGMEVTDTGNPIMVPVGSASLGRIMNVVGRPVDEMGDIDAAKSLPIHRPAPEFNEQNTNVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAK 174
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_CLOK5 (ATP synthase subunit beta OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=atpD PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.482e-53 Identity = 95/167 (56.89%), Postives = 134/167 (80.24%), Query Frame = 2 Query: 296 IGQVCQVIGAVVDVRFDE-GLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 IG+V QVIG VVD++FDE LP I A+ + + +++ EVAQH+G+ +VRTI+M+ T+GL+RG L+ G+PI+VPVG+ LGR+ N++G+PIDE G+++ + Y PIHR AP+F +Q+ + ++ TGIKV+DL+APYQ+GGKIGLFGGAGVGKTV+I ELINN+AK Sbjct: 4 IGKVVQVIGPVVDIKFDEENLPDIYNAISIESGNAKIITEVAQHLGDDIVRTISMESTDGLMRGMDALDIGAPISVPVGKPVLGRLFNMLGQPIDENGEVEADEYSPIHRPAPSFEDQSVKPEMFETGIKVIDLIAPYQKGGKIGLFGGAGVGKTVIIQELINNIAK 170
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_DESVV (ATP synthase subunit beta OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=atpD PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.466e-53 Identity = 105/171 (61.40%), Postives = 131/171 (76.61%), Query Frame = 2 Query: 296 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 IG++ QVIGAVVDV F G LP IL AL++ + + LV EVAQH+G+ +VRTIAMD TEGLVRG +TG PI VPVG+ +LGRIMNV+G P+DE G + + LPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV++ME+INN+AK Sbjct: 5 IGKIVQVIGAVVDVEFPSGQLPNILNALDIKNPNNTDAPDLVCEVAQHLGDNIVRTIAMDATEGLVRGMEASDTGKPIMVPVGKASLGRIMNVVGRPVDELGPINADKSLPIHRAAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAK 175
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_DESVH (ATP synthase subunit beta OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=atpD PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.466e-53 Identity = 105/171 (61.40%), Postives = 131/171 (76.61%), Query Frame = 2 Query: 296 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 IG++ QVIGAVVDV F G LP IL AL++ + + LV EVAQH+G+ +VRTIAMD TEGLVRG +TG PI VPVG+ +LGRIMNV+G P+DE G + + LPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV++ME+INN+AK Sbjct: 5 IGKIVQVIGAVVDVEFPSGQLPNILNALDIKNPNNTDAPDLVCEVAQHLGDNIVRTIAMDATEGLVRGMEASDTGKPIMVPVGKASLGRIMNVVGRPVDELGPINADKSLPIHRAAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAK 175
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_THENN (ATP synthase subunit beta OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=atpD PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.106e-52 Identity = 104/171 (60.82%), Postives = 135/171 (78.95%), Query Frame = 2 Query: 287 KGAIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVA 790 KG+ G + V+G VVDV+F +E LP I ALEVV+ ++VLEV Q +G+GVVRT+AMD T+GL++G V++TG PIT PVG+ LGRI+NVIGEP+DE G++K++ PIHR AP +EQ+TE +IL TGIKV+DLLAP+ +GGKIG FGGAGVGKTVL+MELI N+A Sbjct: 3 KGSKGYIVGVMGPVVDVKFPEEELPDIFNALEVVNPQTGQKIVLEVEQLIGDGVVRTVAMDSTDGLMKGLEVVDTGEPITAPVGKEVLGRILNVIGEPVDEAGEIKSKERWPIHRPAPELIEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELIRNIA 173
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_STIAU (ATP synthase subunit beta OS=Stigmatella aurantiaca GN=atpD PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.106e-52 Identity = 106/172 (61.63%), Postives = 129/172 (75.00%), Query Frame = 2 Query: 296 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 +G++ QV+G V+DV F G LP + TAL+V + S+ L +EVAQH+GE +VR I+MD TEGL RGQ V NTG+PI VPVG+ TLGRI+NVIGEP+DE+G + + PIHR AP FV+Q Q TGIKV+DLL PY RGGKIGLFGGAGVGKTVL+MELI NVAK Sbjct: 8 VGKITQVLGPVIDVEFPPGGLPEVYTALKVTNTSISAEADNLTIEVAQHLGENMVRCISMDSTEGLARGQAVKNTGAPIQVPVGQGTLGRILNVIGEPVDERGPITSSQTWPIHRPAPTFVDQDVRVQAFETGIKVIDLLGPYTRGGKIGLFGGAGVGKTVLLMELIVNVAK 179
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_THESQ (ATP synthase subunit beta OS=Thermotoga sp. (strain RQ2) GN=atpD PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.463e-52 Identity = 104/171 (60.82%), Postives = 134/171 (78.36%), Query Frame = 2 Query: 287 KGAIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVA 790 KG+ G + ++G VVDV+F +E LP I ALEVV+ ++VLEV Q +G+GVVRT+AMD T+GL +G V++TG+PIT PVG+ LGRI+NVIGEP+DE G++K + PIHR AP VEQ+TE +IL TGIKV+DLLAP+ +GGKIG FGGAGVGKTVL+MELI N+A Sbjct: 3 KGSKGFIVSIMGPVVDVKFPEEELPDIYNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEVLGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELIRNIA 173
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_THEP1 (ATP synthase subunit beta OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=atpD PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.463e-52 Identity = 104/171 (60.82%), Postives = 134/171 (78.36%), Query Frame = 2 Query: 287 KGAIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVA 790 KG+ G + ++G VVDV+F +E LP I ALEVV+ ++VLEV Q +G+GVVRT+AMD T+GL +G V++TG+PIT PVG+ LGRI+NVIGEP+DE G++K + PIHR AP VEQ+TE +IL TGIKV+DLLAP+ +GGKIG FGGAGVGKTVL+MELI N+A Sbjct: 3 KGSKGFIVSIMGPVVDVKFPEEELPDIYNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEVLGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELIRNIA 173
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_THEMA (ATP synthase subunit beta OS=Thermotoga maritima GN=atpD PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.463e-52 Identity = 104/171 (60.82%), Postives = 134/171 (78.36%), Query Frame = 2 Query: 287 KGAIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVA 790 KG+ G + ++G VVDV+F +E LP I ALEVV+ ++VLEV Q +G+GVVRT+AMD T+GL +G V++TG+PIT PVG+ LGRI+NVIGEP+DE G++K + PIHR AP VEQ+TE +IL TGIKV+DLLAP+ +GGKIG FGGAGVGKTVL+MELI N+A Sbjct: 3 KGSKGFIVSIMGPVVDVKFPEEELPDIYNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEVLGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELIRNIA 173 The following BLAST results are available for this feature:
BLAST of CB290630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290630 ID=CB290630; Name=CB290630; organism=Citrus sinensis; type=EST; length=798bpback to top |