CB290630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPB (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB18) GN=atpD PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.192e-60 Identity = 119/166 (71.69%), Postives = 137/166 (82.53%), Query Frame = 2 Query: 299 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 G++ QVIGAVVDV+F+ LP IL A+E + + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKA Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAVETKNGNNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKA 174
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_RHOP2 (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain HaA2) GN=atpD PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.192e-60 Identity = 119/166 (71.69%), Postives = 136/166 (81.93%), Query Frame = 2 Query: 299 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKA Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKA 174
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_BRASO (ATP synthase subunit beta OS=Bradyrhizobium sp. (strain ORS278) GN=atpD PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.192e-60 Identity = 120/172 (69.77%), Postives = 138/172 (80.23%), Query Frame = 2 Query: 281 TGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 T IG+V QVIGAVVDV+F+ LP IL +LE + RLVLEVAQH+GE VR IAMD TEGLVRGQ V +TG+PI VPVG TLGRI+NVIGEPIDE G +K ++ IH+EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKA Sbjct: 3 TAANQIGRVTQVIGAVVDVQFEGHLPAILNSLETKNGGNRLVLEVAQHLGESTVRAIAMDTTEGLVRGQEVTDTGAPIRVPVGEGTLGRIINVIGEPIDEAGPVKADNVRAIHQEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKA 174
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_SILPO (ATP synthase subunit beta OS=Silicibacter pomeroyi GN=atpD PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.475e-60 Identity = 117/167 (70.06%), Postives = 135/167 (80.84%), Query Frame = 2 Query: 293 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 A G+V Q+IGAVVDV+FD+ LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG V +TG PI+VPVG TLGRI+NVIGEP+DEKG + IH+ AP+F EQ+T ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK Sbjct: 4 AKGKVTQIIGAVVDVQFDDALPEILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGAVVTDTGGPISVPVGAATLGRILNVIGEPVDEKGPVNATETRAIHQPAPSFDEQSTSSDILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAK 170
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_NITHX (ATP synthase subunit beta OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=atpD PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.475e-60 Identity = 119/166 (71.69%), Postives = 137/166 (82.53%), Query Frame = 2 Query: 299 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G +K E IH+EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKA Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVKDTGNPILVPVGVGTLGRIMNVIGEPVDEQGPVKAEDMRAIHQEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKA 174
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB2_DINSH (ATP synthase subunit beta 2 OS=Dinoroseobacter shibae (strain DFL 12) GN=atpD2 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 7.150e-60 Identity = 117/167 (70.06%), Postives = 135/167 (80.84%), Query Frame = 2 Query: 293 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 A G+V QVIGAVVDV+F++ LP IL AL ++ +LVLEVAQH+GE VRTIAMD TEGLVRG V +TG PIT+PVG TLGRIMNVIGEPIDEKG ++ IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK Sbjct: 4 AKGKVTQVIGAVVDVQFEDTLPEILNALNTENNGKKLVLEVAQHLGENTVRTIAMDATEGLVRGAEVTDTGGPITIPVGNATLGRIMNVIGEPIDEKGPVEASESRAIHQPAPEFSEQSTGSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAK 170
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_ERYLH (ATP synthase subunit beta OS=Erythrobacter litoralis (strain HTCC2594) GN=atpD PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.220e-59 Identity = 117/165 (70.91%), Postives = 135/165 (81.82%), Query Frame = 2 Query: 299 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 G + QVIGAVVDV+F LP ILTALE + LVLEVAQH+GE VRTIAMDGT+GLVRGQ V+NTG+ I+VPVG TLGRIMNV+GEPID +G + + PIH EAPAFV+Q+T+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLI ELINN+AK Sbjct: 13 GTISQVIGAVVDVQFPGELPAILTALETENGDTTLVLEVAQHLGENTVRTIAMDGTDGLVRGQEVINTGAQISVPVGPKTLGRIMNVVGEPIDMRGPVGADKANPIHAEAPAFVDQSTDAAILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAK 177
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_AZOC5 (ATP synthase subunit beta OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpD PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.220e-59 Identity = 118/166 (71.08%), Postives = 135/166 (81.33%), Query Frame = 2 Query: 299 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 G++ QVIGAVVDV+FD LP IL ALE + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG PI VPVG TLGRIMNVIGE +DE G + E IH++AP++ EQ+TE ++LVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AKA Sbjct: 6 GRITQVIGAVVDVQFDSHLPEILNALETTNQGNRLVLEVAQHLGENTVRTIAMDSTEGLVRGQAVEDTGGPIMVPVGEATLGRIMNVIGEAVDELGPVVGEAKRAIHQQAPSYSEQSTEAEMLVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKA 171
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_YEAST (ATP synthase subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=ATP2 PE=1 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.593e-59 Identity = 117/167 (70.06%), Postives = 138/167 (82.63%), Query Frame = 2 Query: 299 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKA 796 G+V VIGA+VDV F++ LP IL ALE+ +LVLEVAQH+GE VRTIAMDGTEGLVRG++VL+TG PI+VPVGR TLGRI+NVIGEPIDE+G +K++ PIH + P+F EQ+T +IL TGIKVVDLLAPY RGGKIGLFGGAGVGKTV I ELINN+AKA Sbjct: 44 GKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKA 210
BLAST of CB290630 vs. ExPASy Swiss-Prot
Match: ATPB_ZYMMO (ATP synthase subunit beta OS=Zymomonas mobilis GN=atpD PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.080e-59 Identity = 112/171 (65.50%), Postives = 138/171 (80.70%), Query Frame = 2 Query: 281 TGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 793 + K IG++ QVIG VVDV F+E LPP+LTALE + +VLEVAQH+GE VVRTI+MD T+GLVRGQ V++TGS I VPVG TLGRIMNV+G P+DE+G + ++ +PIH +AP F EQ+T+ IL TGIKV+DLLAPY +GGK+GLFGGAGVGKTVLI ELINN+AK Sbjct: 5 SSKKNIGRISQVIGPVVDVLFEEKLPPLLTALETKNQDATVVLEVAQHLGENVVRTISMDTTDGLVRGQEVVDTGSEIRVPVGPETLGRIMNVVGRPVDERGPIGSKQTMPIHADAPPFTEQSTDTAILTTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAK 175 The following BLAST results are available for this feature:
BLAST of CB290630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290630 ID=CB290630; Name=CB290630; organism=Citrus sinensis; type=EST; length=798bpback to top |