CB290635

Overview
NameCB290635
Unique NameCB290635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.629e-17
Identity = 70/218 (32.11%), Postives = 99/218 (45.41%), Query Frame = 1
Query:  175 IAEFIATFLFLYISVLTVMGVVKSN-TKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQY----GRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGA 813
            I + IA     Y  +    G V  N +K   +   G+A  +G  + V+VY    ISG H NPAVTL     R+    +   Y   Q LGA   AG ++  M  G++    G L  G++V          L  E I TF L++ +       R+  +     LA L +G  + L  L   PI+G  +NPARSLG A+I  + R     W++ VGP  GA
Sbjct:   47 IQKIIAEIFGTYFLIFAGCGAVTINQSKNGQITFPGVAIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLR-LMFGGRHEHFPGTLPAGSDV--------QSLVLEFIITFYLMFVISGVATDNRAIGE-----LAGLAVGATILLNVLIAGPISGASMNPARSLGPAMIGGEYR---SIWVYIVGPVAGA 247          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.779e-17
Identity = 71/219 (32.42%), Postives = 107/219 (48.86%), Query Frame = 1
Query:  175 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIF-VLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG-----LGAEIIGTFVLVY-TVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXG 810
            I+E +ATFL ++++        + N + S +G Q +A   GG+I  V++Y T  ISG H+NPAVTL     R     +  FY   Q  GA+C A V+K  +             +   G T   G     L  EI+ TF +++ T   ATD++       V  LA L +G AV +  +   P++G  +NPAR+L  A+  N   G    WI+++GP  G
Sbjct:   58 ISEVVATFLLVFVTCGAASIYGEDNARISQLG-QSVA---GGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVL-----------QPIAVIGTTTPSGPHWHALAIEIVVTFNMMFVTCAVATDSRA------VGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGL---WIYFLGPVVG 252          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.056e-16
Identity = 71/219 (32.42%), Postives = 107/219 (48.86%), Query Frame = 1
Query:  175 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIF-VLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG-----LGAEIIGTFVLVY-TVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXG 810
            I+E +ATFL ++++        + N + S +G Q +A   GG+I  V++Y T  ISG H+NPAVTL     R     +  FY   Q  GA+C A V+K  +             +   G T   G     L  EI+ TF +++ T   ATD++       V  LA L +G AV +  +   P++G  +NPAR+L  A+  N   G    WI+++GP  G
Sbjct:   55 ISEVVATFLLVFVTCGAASIYGEDNRRISQLG-QSVA---GGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHP-----------IAVIGTTTPSGPHWHALLIEIVVTFNMMFVTCAVATDSRA------VGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGL---WIYFLGPVIG 249          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.056e-16
Identity = 68/213 (31.92%), Postives = 107/213 (50.23%), Query Frame = 1
Query:  175 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVY-TVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXG 810
            ++E +ATFL ++   +T      S +  S +   G + A G ++ V++Y    ISG H+NPAVTL   + R     +  FY   Q  GAIC + V+K  +       +     V  H ++    L  E+I TF +++ T+  ATD +       V  LA L +G AV +  +    I+G  +NPAR+LG A+  NK   +D  WI+++GP  G
Sbjct:   52 VSEVVATFLLVF---MTCGAAGISGSDLSRISQLGQSIAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVIHPVDV--IGTTTPVGPHWHS----LVVEVIVTFNMMFVTLAVATDTRA------VGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNK---FDGLWIYFLGPVMG 246          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.801e-16
Identity = 66/225 (29.33%), Postives = 105/225 (46.67%), Query Frame = 1
Query:  145 LKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK-GFMGAGQYGRLAGGANVVAH-GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGA 813
            L S SF +  I EF+ TF  ++        +V + T    V + GIA  +G ++ V++Y    +SG H NPAV++    ++K    +   Y+  Q LG+   A V++  F        L G   V  +   +       E I TF L++ + +    KR+         A + IG  + L  L + PI+G  +NPARSLG A+I+     + D W++ V P  GA
Sbjct:   36 LVSVSFVQKLIGEFVGTFTMIFAGC---SAIVVNETYGKPVTLPGIALVWGLVVTVMIYSIGHVSGAHFNPAVSIAFASSKKFPFNQVPGYIAAQLLGSTLAAAVLRLVFHLDDDVCSLKGDVYVGTYPSNSNTTSFVMEFIATFNLMFVISAVATDKRATGS-----FAGIAIGATIVLDILFSGPISGASMNPARSLGPALIWG---CYKDLWLYIVSPVIGA 249          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.801e-16
Identity = 66/223 (29.60%), Postives = 104/223 (46.64%), Query Frame = 1
Query:  160 FYRAGIAEFIATFLFLYISVLTVMGVVKSN-TKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQY----GRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGA 813
            F +  IAE   T+  ++       G V  N +K   +   G+A  +G  + V+VY    ISG H NPAVTL    + +    +   Y++ Q LGA   +G ++  M  G++    G L  G+ V          L  EII TF L++ +       R+  +     LA L +G  + L  L   P++G  +NPARS+G A++  +   +   W++ VGP  GA
Sbjct:   42 FIQKIIAEIFGTYFLMFAGC----GAVTINASKNGQITFPGVAIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQMLGATLASGTLR-LMFGGRHEHFPGTLPTGSEV--------QSLVIEIITTFYLMFVISGVATDNRAIGE-----LAGLAVGATILLNVLIAGPVSGASMNPARSVGPALVSGE---YTSIWVYVVGPVVGA 243          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.352e-16
Identity = 67/224 (29.91%), Postives = 96/224 (42.86%), Query Frame = 1
Query:  151 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQ---YGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGA 813
            S  F +  IAE + TF  ++     V   V   T   TV   GI   +G  + V+VY    ISG H+NPAVTL      +    R   Y   Q  G+   +  ++   G      +G    G++V          L  E I TF L++ V       R+  +     LA L +G  V +  L   PI+G  +NPAR++G AII  +  G    W++  GP  GA
Sbjct:   49 SVQFAQKVIAEILGTFFLIFAGCAAV--AVNKRTG-GTVTFPGICITWGLAVMVMVYSVGHISGAHLNPAVTLAFATCGRFPWRRVPAYAAAQVAGSAAASAALRALFGGAPEHFFGTAPAGSDV--------QSLAMEFIITFYLMFVVSGVATDNRAIGE-----LAGLAVGATVLVNVLFAGPISGASMNPARTIGPAIILGRYTG---IWVYIAGPVFGA 253          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP12_ARATH (Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.352e-16
Identity = 67/221 (30.32%), Postives = 103/221 (46.61%), Query Frame = 1
Query:  160 FYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGA---EIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGA 813
            F +  +AE + T+ FL  +    + V   + K  T  + GIA  +G  + VLVY    ISG H NPAVT+      +  L +   Y++ Q +G+   A  ++   G  Q    +G  +V       G  L +   E I TF L++ +       R+  +     LA L +G  V L  +   P++G  +NP RSLG A++Y+  RG    WI+ V P  GA
Sbjct:   50 FLQKLMAEVLGTY-FLIFAGCAAVAVNTQHDKAVT--LPGIAIVWGLTVMVLVYSLGHISGAHFNPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDQ-DVCSGKHDVFVGTLPSGSNLQSFVIEFIITFYLMFVISGVATDNRAIGE-----LAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAMVYSCYRGL---WIYIVSPIVGA 258          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.072e-16
Identity = 73/237 (30.80%), Postives = 109/237 (45.99%), Query Frame = 1
Query:  175 IAEFIATFLFLY-------ISVLTVMGVVKSNTKCSTVGIQG-------IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG--AGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI---IYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            IAEFI TF  ++       I+++   G    N     +G+ G       I  AFG  I   +Y    ISG HINPAVT+GL+  +K      + Y++ Q LGA   + +     G  A   G L   A     GY +   + AE +GTF+L+ T+      +R+ +       A + IG  V  +      ITG+ +NPAR+ G  +   ++     W+   I+ +GP  GA LAAL
Sbjct:    9 IAEFIGTFFLVFFGAGAAAITLMIASGGTAPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGLGATAPFPGIGYWQ--AMLAETVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTIGNITGSSLNPARTFGPYLNDMVFAGTNLWNYFPIYVIGPVVGAVLAAL 238          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.012e-16
Identity = 66/222 (29.73%), Postives = 103/222 (46.40%), Query Frame = 1
Query:  175 IAEFIATFLFLYISVLTVMGVVKSNTKCS-TVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV--------KGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXG 810
            IAE I T+  ++       GVV  N     T+   GI   +G ++ V++Y T  ISG H NPAVT+   + R+    +   Y+  Q  G++  +  +        K F G                  + G  L AEII +F+L++ +   ATD++ +        LA + +G  + L      PI+G  +NPARSLG AI+  + +G    W++ VGPF G
Sbjct:   46 IAEMIGTYFIIFSGC----GVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTTPTD-------------SSGQALVAEIIISFLLMFVISGVATDSRATGE------LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKG---IWVYIVGPFVG 241          
The following BLAST results are available for this feature:
BLAST of CB290635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
NIP11_ORYSJ1.629e-1732.11Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica G... [more]
NIP23_MAIZE2.779e-1732.42Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1[more]
NIP22_MAIZE1.056e-1632.42Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1[more]
NIP21_ORYSJ1.056e-1631.92Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
NIP31_ARATH1.801e-1629.33Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1... [more]
NIP11_MAIZE1.801e-1629.60Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1[more]
NIP13_ORYSJ2.352e-1629.91Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica G... [more]
NIP12_ARATH2.352e-1630.32Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2... [more]
AQPM_METTH3.072e-1630.80Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
NIP42_ARATH4.012e-1629.73Probable aquaporin NIP4-2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cf10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cf10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290635 ID=CB290635; Name=CB290635; organism=Citrus sinensis; type=EST; length=831bp
GCAGAAATGGAAGGTAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTT
CGCCGAGAGGCAGCCGATTGGGACGGCGGCTCAGACCCAAGATGGGAAGG
ACTACCCTGAGCCCCCACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAG
TCTTGGTCGTTTTACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCT
TTTCTTGTACATCTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAATA
CCAAGTGCTCAACCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGC
ATGATCTTCGTGCTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATAT
CAACCCGGCGGTGACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGA
CACGTGCACTTTTCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGT
GCTGGCGTTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGC
CGGCGGTGCCAACGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTG
GTGCCGAGATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCC
ACTGATGCCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCC
TCTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCTACCATCCCAA
TTACCGGAACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCATC
TACAACAAGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGACC
ATTCGNTGGAGCTGGACTTGCAGCTTTGTAC
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