CB290635

Overview
NameCB290635
Unique NameCB290635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: YFF4_YEAST (Uncharacterized membrane protein YFL054C OS=Saccharomyces cerevisiae GN=YFL054C PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.152e-13
Identity = 79/251 (31.47%), Postives = 101/251 (40.24%), Query Frame = 1
Query:  166 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG------IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKG--------FMGAGQYGRLAGGANVVAHG---YTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI---LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDH----------WIFWVGPFXGAGLAAL 828
            R   AEF+ T       VL + GV  +     T G  G       AW FG M+ V  Y   GISGGHINPAVT+ + + RK    +   Y+V Q +GA  G  +  G        F G       A GA +        T  +    E IG  +LV  + +  D      DS+ P    +  L IGF V  + +A    T   INPAR LG   I+    G+  H          W  W GP  G    AL
Sbjct:  348 REPFAEFLGTL------VLVIFGVGGNLQATVTKGSGGSYESLSFAWGFGCMLGV--YVAGGISGGHINPAVTISMAIFRKFPWKKVPVYIVAQIIGAYFGGAMAYGYFWSSITEFEGGPHIRTTATGACLFTDPKSYVTWRNAFFDEFIGASILVGCLMALLD------DSNAPPGNGMTALIIGFLVAAIGMALGYQTSFTINPARDLGPR-IFASMIGYGPHAFHLTHWWWTWGAWGGPIAGGIAGAL 583          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQP9_RAT (Aquaporin-9 OS=Rattus norvegicus GN=Aqp9 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-13
Identity = 67/241 (27.80%), Postives = 102/241 (42.32%), Query Frame = 1
Query:  175 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYT-------------KGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW---------DDHWIFWVGPFXGAGLAAL 828
            ++EF+ TF+ + +   ++   V S  +    GI  I   F   + + +Y T GISGGHINPAV+  +    ++   +  FY+  Q LGA  GA  V G    G      G   VV    T                    +++ T  L+  VF+  D    +R+  VP  L P+ IG  + ++  +    +G  +NPAR L    ++    GW         +  WI  VGP  GA L  L
Sbjct:   27 LSEFLGTFIMIVLGCSSIAQAVLSRERFG--GIITINIGFASAVVMALYVTFGISGGHINPAVSFAMCAFGRMEWFKFPFYVGAQFLGAFVGAATVFGIYYDGLMAFAGGKLLVVGENATAFIFATYPAPFISTPGAFVDQVVSTMFLLLIVFAMFD----SRNLGVPRGLEPVVIGLLIIVLSCSLGLNSGCAMNPARDLSPR-LFTALAGWGFEVFTVGNNFWWIPVVGPMIGAFLGGL 260          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: SIP12_MAIZE (Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.082e-13
Identity = 63/230 (27.39%), Postives = 100/230 (43.48%), Query Frame = 1
Query:  166 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCST-VGIQGIAWAF-------GGMIFVLVYCTAGISGGHINPAVTLGLFLA--RKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAA 825
            RA  A+ + TFL+    VL V  +  S T  ++ + +QG+ +A          ++FV       + G   NP      + A     SL      +  Q  GA+ GA  +   M A QY  + GG ++    +T   G GAE++ TFV+   V          +    PI+    I      + L+    TG  +NPA + G A + N+   W+  +++W+ PF GA LAA
Sbjct:    8 RAAAADAVVTFLW----VLCVSTLGASTTAVTSYLRLQGVHFALLVTVSLLSVLLFVFNILCDALGGASFNPTGVAAFYAAGVTSPSLFSIALRLPAQAAGAVGGALAISELMPA-QYRHMLGGPSLKVDPHT---GAGAELVLTFVITLAVLLII-----VKGPRNPIIKTWMISICTLCLVLSGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFIGAILAA 224          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQPM_ARCFU (Probable aquaporin aqpM OS=Archaeoglobus fulgidus GN=aqpM PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.082e-13
Identity = 73/237 (30.80%), Postives = 104/237 (43.88%), Query Frame = 1
Query:  178 AEFIATFLFLYI----SVLTVM---GVVKSNTKCSTVGIQG-------IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG--AGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD-----RGWDDHWIFWVGPFXGAGLAA 825
            AE + TF+ ++     +V+T+M   G  K N     +G  G       I  AF   I  ++Y    ISG HINPAVT+ L+   +      + Y+V Q +GA  G+ +    +G  A   G L   A     GY  G  +  E IGTF+L+  +      +R+      P  A L IG  V  +      ITG+ +NPAR+ G    Y  D       W    I+ +GP  GA  AA
Sbjct:   11 AEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGMAFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVGPAAATVGGLGATAPFPGIGY--GQAILTEAIGTFLLMLVIMGVAVDERAP-----PGFAGLVIGLTVGGIITTIGNITGSSLNPARTFGP---YLGDSLMGINLWQYFPIYVIGPIVGAVAAA 237          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQP9_MOUSE (Aquaporin-9 OS=Mus musculus GN=Aqp9 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.082e-13
Identity = 67/241 (27.80%), Postives = 104/241 (43.15%), Query Frame = 1
Query:  175 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV-----KGFMGAGQYGRLAGGANVVAHGY--------TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW---------DDHWIFWVGPFXGAGLAAL 828
            ++EF+ TF+ + +   ++   V S  K    GI  I   F   + + +Y T G+SGGHINPAV+  +    ++   +  FY+  Q LGA  GA  V      G M       L  G N  A  +        +       +++ T  L+  VF+  D    +R+  VP  L P+ IG  + ++  +    +G  +NPAR L    ++    GW         +  WI  VGP  GA L  L
Sbjct:   27 LSEFLGTFIMIVLGCGSIAQAVLSREKAG--GIITINIGFATAVVMALYATFGVSGGHINPAVSFAMCTFGRMEWFKFPFYVGAQLLGAFVGAATVFGIYYDGLMAFADGKLLITGENGTAFIFATYPKPFVSVPGAFVDQVVSTMFLLLIVFAIFD----SRNLGVPRGLEPIVIGLLIIVISCSLGLNSGCAMNPARDLSPR-LFTALAGWGFEVFTFGNNFWWIPVVGPMIGAVLGGL 260          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.250e-13
Identity = 61/217 (28.11%), Postives = 96/217 (44.24%), Query Frame = 1
Query:  175 IAEFIATFLFLYISVLTVMGVVKSNTKCS-TVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGD----GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXG 810
            IAE I T    Y  V +  GVV  N     T+   GI   +G ++ V++Y T  ISG H NPAVT+   + R+    +   Y+  Q  G++  +  ++                    G T  D     L AEII +F+L++ +       R+  +     LA + +G  + +      PI+G  +NPARSLG A++      +   W++ VGP  G
Sbjct:   46 IAEMIGT----YFIVFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKV---------TPEAFFGTTPADSPARALVAEIIISFLLMFVISGVATDNRAVGE-----LAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMGV---YKHIWVYIVGPVLG 241          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: YI7H_SCHPO (Uncharacterized membrane protein C977.17 OS=Schizosaccharomyces pombe GN=SPAC977.17 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.208e-12
Identity = 60/204 (29.41%), Postives = 86/204 (42.16%), Query Frame = 1
Query:  160 FYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKG--------FMGAGQYGRLAGGANVVAHG---YTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 738
            F+R G AEF+ T + +   V + +    +N    +      AW FG M+ V  Y   GISGGH+NPAVT+ L + RK    +   Y+  Q  GA  G  +  G        F G       A G  +  +     T  +    E IGT VLV  +F+  D   S        +    +G  +  + +A    T   +NPAR LG
Sbjct:  309 FFREGFAEFLGTLVLVVFGVGSNLQATVTNGAGGSFESLSFAWGFGCMLGV--YIAGGISGGHVNPAVTISLAIFRKFPWYKVPIYIFFQIWGAFFGGALAYGYHWSSITEFEGGKDIRTPATGGCLYTNPKPYVTWRNAFFDEFIGTAVLVGCLFAILDDTNSPPTQG---MTAFIVGLLIAAIGMALGYQTSFTLNPARDLG 507          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.208e-12
Identity = 62/224 (27.68%), Postives = 99/224 (44.20%), Query Frame = 1
Query:  157 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAA 825
            S YR   AEF+ T + ++    T +   K++   + +G    A   G  + +++  T  ISG H+NPAVT+     +         Y+  Q + ++  A  +K          ++GG  V   G ++   L  E I +F L++ V + ATD +       V  LA + +G  V L  L   P T   +NP R+LG AI  N  R     W++   P  GA + A
Sbjct:   77 SLYRKLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASA---GLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFEP----TMSGGVTVPTVGLSQAFAL--EFIISFNLMFVVTAVATDTRA------VGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRA---IWVYLTAPILGALIGA 282          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP12_ORYSJ (Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica GN=NIP1-2 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.208e-12
Identity = 60/215 (27.91%), Postives = 96/215 (44.65%), Query Frame = 1
Query:  175 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANV---VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXG 810
            +AE + T+  ++     V  VV  +T    V   GI   +G ++ VLVY  + ISG H NPAVT+      +    +   Y+V Q LG+   +  ++   G G  G  A G ++        +       E + +F L++ V       R+  +     LA L +G  V +  L   P+TG  +NPARSLG A++  +  G    W++   P  G
Sbjct:   67 LAEILGTYFMIFAGCGAV--VVNQSTG-GAVTFPGICAVWGLVVMVLVYTVSHISGAHFNPAVTVAFATCGRFRWKQVPSYVVAQVLGSTMASLTLRVVFGGGGGG--ARGEHLFFGTTPAGSMAQAAALEFVISFFLMFVVSGVATDNRAIGE-----LAGLAVGATVAVNVLFAGPVTGASMNPARSLGPAMVAGRYGG---VWVYVAAPVSG 268          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: NIP71_ARATH (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana GN=NIP7-1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.578e-12
Identity = 66/227 (29.07%), Postives = 104/227 (45.81%), Query Frame = 1
Query:  166 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCST--VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVA--HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWD--DHWIFWVGPFXGAGLAAL 828
            R  +AE + TF+ ++    +V GV+ S+T+ S   VG+   A   G  + V+VY    ISG H+NP++T+   +      ++   Y+  Q LGA          +G   YG     A+++A     +       E+I T ++V+       A       ++  L    IG  + L  L T PI+G  +NPARSLG A++      WD  D WI+   P  GA +  L
Sbjct:   46 RIVMAELVGTFILMF----SVCGVI-SSTQLSGGHVGLLEYAVTAGLSVVVVVYSIGHISGAHLNPSITIAFAVFGGFPWSQVPLYITAQTLGATAAT-----LVGVSVYG---VNADIMATKPALSCVSAFFVELIATSIVVF----LASALHCGPHQNLGNLTGFVIGTVISLGVLITGPISGGSMNPARSLGPAVV-----AWDFEDLWIYMTAPVIGAIIGVL 250          
The following BLAST results are available for this feature:
BLAST of CB290635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
YFF4_YEAST4.152e-1331.47Uncharacterized membrane protein YFL054C OS=Saccha... [more]
AQP9_RAT5.423e-1327.80Aquaporin-9 OS=Rattus norvegicus GN=Aqp9 PE=2 SV=1[more]
SIP12_MAIZE7.082e-1327.39Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1[more]
AQPM_ARCFU7.082e-1330.80Probable aquaporin aqpM OS=Archaeoglobus fulgidus ... [more]
AQP9_MOUSE7.082e-1327.80Aquaporin-9 OS=Mus musculus GN=Aqp9 PE=2 SV=1[more]
NIP41_ARATH9.250e-1328.11Putative aquaporin NIP4-1 OS=Arabidopsis thaliana ... [more]
YI7H_SCHPO1.208e-1229.41Uncharacterized membrane protein C977.17 OS=Schizo... [more]
NIP61_ARATH1.208e-1227.68Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1... [more]
NIP12_ORYSJ1.208e-1227.91Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica G... [more]
NIP71_ARATH1.578e-1229.07Probable aquaporin NIP7-1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cf10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cf10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290635 ID=CB290635; Name=CB290635; organism=Citrus sinensis; type=EST; length=831bp
GCAGAAATGGAAGGTAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTT
CGCCGAGAGGCAGCCGATTGGGACGGCGGCTCAGACCCAAGATGGGAAGG
ACTACCCTGAGCCCCCACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAG
TCTTGGTCGTTTTACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCT
TTTCTTGTACATCTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAATA
CCAAGTGCTCAACCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGC
ATGATCTTCGTGCTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATAT
CAACCCGGCGGTGACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGA
CACGTGCACTTTTCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGT
GCTGGCGTTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGC
CGGCGGTGCCAACGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTG
GTGCCGAGATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCC
ACTGATGCCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCC
TCTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCTACCATCCCAA
TTACCGGAACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCATC
TACAACAAGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGACC
ATTCGNTGGAGCTGGACTTGCAGCTTTGTAC
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