CB290635

Overview
NameCB290635
Unique NameCB290635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 5.385e-37
Identity = 94/226 (41.59%), Postives = 131/226 (57.96%), Query Frame = 1
Query:  157 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLA-ALY 831
            +F++A  AEF+AT +F+ + V + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY++ QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W +HWI+WVGP  GA LA ALY
Sbjct:   33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWANHWIYWVGPIMGAVLAGALY 248          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.046e-36
Identity = 90/222 (40.54%), Postives = 129/222 (58.11%), Query Frame = 1
Query:  157 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLA 822
            +F++A  AEF+A  +F+ +S+ + +       K   V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G  +V    T G GL  E+I TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP  GA LA
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINW-GGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLA 244          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.673e-36
Identity = 93/236 (39.41%), Postives = 132/236 (55.93%), Query Frame = 1
Query:  148 KSWSFYRAGIAEFIATFLFLYISVLTVMGV-----VKSNTKCSTVG----IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            K  +F+RA IAEF+A  LF++IS+   +G       K+N    TVG    I  ++ AFG  I  +      +SG H+NPAVTLG  L+ ++S+ +A+ Y++ QCLGA+    ++ G     +   L  G N ++ G + G GLG EI+ TF LV  V + TD +R      V    PL IG +V L HL  I  TG G+NPARS G+A++    + +  HWIFWVGP  G   AA+
Sbjct:    6 KKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKAN---QTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSL--GLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSV----PLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL---TKNFTYHWIFWVGPMIGGAAAAI 229          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.491e-36
Identity = 92/223 (41.26%), Postives = 129/223 (57.85%), Query Frame = 1
Query:  157 SFYRAGIAEFIATFLFLYISV-LTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLA 822
            +F++A  AEF+A  +F+ +S+  T+    K N     V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP  GA LA
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL--PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLA 244          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.776e-36
Identity = 91/227 (40.09%), Postives = 130/227 (57.27%), Query Frame = 1
Query:  151 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            S +F +A  AEF+AT +F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+V Q +GAI GAG++ G       G LA   N + +  T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP  GA +AA+
Sbjct:    7 SLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLA--VNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAAVAAI 219          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.732e-35
Identity = 95/229 (41.48%), Postives = 128/229 (55.90%), Query Frame = 1
Query:  145 LKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS-NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            L+S SF+RA +AEF+ + L+      T++G+  S        G+ G A AFG     LV     +SGGHINPA+TL   LA +LSL RAL Y++ Q LGA+ GAGV+ G   A   G L  G + +      G G   E++ T   +  VF++ D +   R    P  A LP+GF++ L HL  IP TG G+NPARS   A+I    R + +HW+FW GP  GA LAAL
Sbjct:    4 LRSSSFWRAILAEFLGSLLY------TLLGLGASLRWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTL--GLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLGAALAAL 217          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.598e-35
Identity = 89/227 (39.21%), Postives = 130/227 (57.27%), Query Frame = 1
Query:  151 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            S +F++A  AEF+AT +F++  + + +         +   I  I+ AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+  Q +GAI GAG++         G LA   N +++  T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP  GA LAA+
Sbjct:    7 SVAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLA--VNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAVLAAI 219          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.123e-34
Identity = 90/227 (39.65%), Postives = 129/227 (56.83%), Query Frame = 1
Query:  151 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            S +F +A  AEF+AT +F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+TL L +  ++SL RA FY+  Q +GAI GAG++ G       G LA   N + +  T+G  +  E+I TF L   +F++TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP  GA LAA+
Sbjct:    7 SVAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA--VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPAHWVFWVGPIVGAVLAAI 219          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 1.123e-34
Identity = 87/222 (39.19%), Postives = 128/222 (57.66%), Query Frame = 1
Query:  157 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLA 822
            +F++A  AEF+A  +F+ +S+ + +    +  K   V +  I+  FG  I  +V C   ISGGHINPAVT+ +   R++S+ +++FY+  QCLGAI GAG++         G L  G   V    + G GL  E+I TF LV+T+F++ D+KR+     +     L IG +V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP  GA LA
Sbjct:   33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLA 244          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.915e-34
Identity = 89/227 (39.21%), Postives = 129/227 (56.83%), Query Frame = 1
Query:  151 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            S +F++A  AEF+AT +F++  + + +         +   I  I+ AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+  Q +GAI GAG++         G LA   N + +  T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP  GA LAA+
Sbjct:    7 SLAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLA--VNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAMLAAI 219          
The following BLAST results are available for this feature:
BLAST of CB290635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
AQP4_MOUSE5.385e-3741.59Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_HUMAN2.046e-3640.54Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQPA_RANES2.673e-3639.41Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP4_DIPME3.491e-3641.26Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP5_PIG7.776e-3640.09Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
MIP_CHICK1.732e-3541.48Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP5_MOUSE8.598e-3539.21Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP5_HUMAN1.123e-3439.65Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP4_BOVIN1.123e-3439.19Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP5_RAT1.915e-3439.21Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cf10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cf10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290635 ID=CB290635; Name=CB290635; organism=Citrus sinensis; type=EST; length=831bp
GCAGAAATGGAAGGTAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTT
CGCCGAGAGGCAGCCGATTGGGACGGCGGCTCAGACCCAAGATGGGAAGG
ACTACCCTGAGCCCCCACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAG
TCTTGGTCGTTTTACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCT
TTTCTTGTACATCTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAATA
CCAAGTGCTCAACCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGC
ATGATCTTCGTGCTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATAT
CAACCCGGCGGTGACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGA
CACGTGCACTTTTCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGT
GCTGGCGTTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGC
CGGCGGTGCCAACGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTG
GTGCCGAGATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCC
ACTGATGCCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCC
TCTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCTACCATCCCAA
TTACCGGAACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCATC
TACAACAAGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGACC
ATTCGNTGGAGCTGGACTTGCAGCTTTGTAC
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