CB290635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 7.050e-29 Identity = 80/228 (35.09%), Postives = 116/228 (50.88%), Query Frame = 1 Query: 145 LKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828 L+S SF+RA AEF AT +++ + + + + + +A AFG + LV ISG H+NPAVT + ++SL RA Y+ Q LGA+ GA V+ G LA N + G + G EI T V +F+ D +R+ R V L +GF++ L HL + TG G+NPARS AI+ R + +HW++WVGP G GL +L Sbjct: 2 LRSASFWRAIFAEFFATLFYVFFGLGSSLRWAPG-----PLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFSNHWVYWVGPIIGGGLGSL 215
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.207e-29 Identity = 85/233 (36.48%), Postives = 127/233 (54.51%), Query Frame = 1 Query: 166 RAGIAEFIATFLFLYISVLTVMGVVK------SNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK----GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828 RA +AEF++TF+F++ +++ + K ++T +T G + +A A +F V +SGGH+NPAVT + ++S+ RA++Y V Q +GAI +++ G G + VA G ++ GL EII TF LVY V+S A D KR + + I+APL IG V L P G +NPAR+ G A++ + W +HWI+WVGPF G LAAL Sbjct: 24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFH---------VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWR---WSNHWIYWVGPFIGGALAAL 240
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 9.207e-29 Identity = 80/228 (35.09%), Postives = 115/228 (50.44%), Query Frame = 1 Query: 145 LKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828 L+S SF+RA AEF AT +++ + + + + +A AFG + LV ISG H+NPAVT + ++SL RA Y+ Q LGA+ GA V+ G LA N + G + G EI T V +F+ D +R+ R V L +GF++ L HL + TG G+NPARS AI+ R + +HW++WVGP G GL +L Sbjct: 4 LRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFSNHWVYWVGPIIGGGLGSL 217
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.202e-28 Identity = 85/229 (37.12%), Postives = 121/229 (52.84%), Query Frame = 1 Query: 166 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG------AEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828 RA I+EFIAT +F++ + +V+ + K ST G + +A A + V V ISGGH+NPAVT G + ++SL RA+ Y V Q LGA+ ++ RLA G + G+ G+G E + TF L+Y ++ D KR HV +APL +GF + LA P G G+NPAR G A++ + W HW++W+GPF GAGLA L Sbjct: 26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLL----------RLATG-GMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFLGAGLAGL 236
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.051e-28 Identity = 87/235 (37.02%), Postives = 129/235 (54.89%), Query Frame = 1 Query: 166 RAGIAEFIATFLFLYISVLTVMGVVK------SNTKCSTVG---IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK----GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSA-TDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828 RA +AEF++TF+F++ + +++ + K ++ +T G + +A AF +F V +SGGH+NPAVT G + +++ RA++Y + Q LGAI +++ G G RLA G V +GL EII TF LVY V+S D KR + + I+APL IG V L P +G +NPAR+ G A++ + W DHWI+WVGPF G+ LAAL Sbjct: 24 RATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFA--LFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVG--FRLASGVGAV-------NGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWR---WHDHWIYWVGPFIGSALAAL 240
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.499e-28 Identity = 80/226 (35.40%), Postives = 119/226 (52.65%), Query Frame = 1 Query: 166 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV----GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828 RA I+EFIAT +F++ + +V+ + K ST+ G+ +A A + V V +SGGH+NPAVT G + ++SL RA+ Y Q LGA+ +++ G + A +A G G + E + TF VY + + D KR H+ +APL +GF + LA P G G+NPAR G A++ + W HW++W+GPF GAGLA L Sbjct: 28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFA-----LASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFLGAGLAGL 241
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.499e-28 Identity = 81/223 (36.32%), Postives = 119/223 (53.36%), Query Frame = 1 Query: 166 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828 RA I+EF+AT +F++ + +++ + K ST G + ++ A + V V ISGGH+NPA+T G L +LSL RALFY + Q LGA+ +++ G + A +A G + E TF L+Y ++ D KR HV +APL +GF + LA P G G+NPAR G A++ + W HW++W+GPF GAGLA L Sbjct: 27 RAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFA-----LASGVGDWHAVLLEATMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFVGAGLAGL 237
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.569e-28 Identity = 82/224 (36.61%), Postives = 117/224 (52.23%), Query Frame = 1 Query: 166 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828 +A +AEFI+T +F++ V + + K G+ +A G +FV V A ISGGH+NPAVT GL L ++++ +FY + Q LGAI GA +V+ G G +G+ EII TF LVYTV+ +A D K+ + + +AP+ IGF V L P +G +NPARS G A+ + + WI+WVGP G GLA L Sbjct: 20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGAF-------EGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAV---ASGDYTNIWIYWVGPLVGGGLAGL 229
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.569e-28 Identity = 81/224 (36.16%), Postives = 119/224 (53.12%), Query Frame = 1 Query: 166 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV--GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828 +A +AEFI+ +F++ + M K T G+ + A +FV V A ISGGH+NPAVT G F+ +SL +A+ Y V Q LG++ ++K G G + A V A + + EI+ TF LVYTV+ +A D K+ + ++AP+ IGF V LA G +NPA S G A++ WD+HW++W+GPF GA +AAL Sbjct: 21 KAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGA-----WNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGV---WDNHWVYWLGPFVGAAIAAL 232
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.968e-28 Identity = 85/224 (37.95%), Postives = 123/224 (54.91%), Query Frame = 1 Query: 166 RAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828 +A +AEFIAT LF++ V + + G + + G+ IA A +FV V A ISGGH+NPAVT GL + +++ LFY + Q LGA ++K F+ G+ G A G ++ +G+ EI+ TF LVYTV+ +A D K+ + + +AP+ IGF V LA P +G +NPARS G A+ G +W++WVGP G GLA L Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLK-FVTHGKAIPTHGVA-----GISELEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAG---NWVYWVGPLIGGGLAGL 229 The following BLAST results are available for this feature:
BLAST of CB290635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290635 ID=CB290635; Name=CB290635; organism=Citrus sinensis; type=EST; length=831bpback to top |