CB290635

Overview
NameCB290635
Unique NameCB290635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.968e-28
Identity = 86/224 (38.39%), Postives = 126/224 (56.25%), Query Frame = 1
Query:  166 RAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            +A +AEFIAT LF++  V + +  G + +       G+  IA A    +FV V   A ISGGH+NPAVT GL +   +++   +FY V Q LGA   A ++ GF+  G+    A   + VA G ++ +G+  E++ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A+      G   +W++WVGP  G GLA L
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATV-ACLLLGFVTHGK----AIPTHAVA-GISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAG---NWVYWVGPLVGGGLAGL 229          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.968e-28
Identity = 80/224 (35.71%), Postives = 119/224 (53.12%), Query Frame = 1
Query:  166 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            +A +AEFI+T +F++    + M   K       +  G+   + A    +FV V   A ISGGH+NPAVT G F+   +SL +AL Y V Q LG++    ++K   G    G  +  A V A      + +  E++ TF LVYTV+ +A D K+      + ++AP+ IGF V    LA     G  +NPA S G A++      W++HW++WVGP  GA +AAL
Sbjct:   21 KAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAM-----NAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGV---WENHWVYWVGPLAGAAIAAL 232          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.968e-28
Identity = 80/228 (35.09%), Postives = 114/228 (50.00%), Query Frame = 1
Query:  145 LKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            L+S SF+RA  AEF AT  +++  +   +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA  YM  Q LGA+ GA V+         G LA   N +  G +       EI  T   V  +F+  D +R+ R   V     L +GF++ L HL  +  TG G+NPARS   AI+    R + +HW++WVGP  G GL +L
Sbjct:    4 LRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPIIGGGLGSL 217          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.794e-28
Identity = 82/226 (36.28%), Postives = 118/226 (52.21%), Query Frame = 1
Query:  166 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLA 822
            +A +AEFIAT LF++  V + +   K  ++      G+  +A A    +FV V   A ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A++      +  +WI+W GP  G GLA
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAG---DFSQNWIYWAGPLIGGGLA 228          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.794e-28
Identity = 82/226 (36.28%), Postives = 118/226 (52.21%), Query Frame = 1
Query:  166 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLA 822
            +A +AEFIAT LF++  V + +   K  ++      G+  +A A    +FV V   A ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A++      +  +WI+W GP  G GLA
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAG---DFSQNWIYWAGPLIGGGLA 228          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.330e-27
Identity = 81/232 (34.91%), Postives = 120/232 (51.72%), Query Frame = 1
Query:  157 SFYRAGIAEFIATF-LFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAH------GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAALY 831
            S  +  +AEFI TF L L      V+     N     +G  G++ AFG  +  + +    ISG HINPAV++GL+ A++   T  L Y+  Q LG I GAGV+    G      L+GG     +      GYT    L  E++ TF+ +  +  +TD +R+ +       AP+ IG ++ L+HL +IP+T T +NPARS G A+    D    + W+FW+ P  GA LA L+
Sbjct:    2 SLVKRSVAEFIGTFWLVLGGCGAAVLAAAFPNLG---IGFAGVSLAFGLTLLTMAFAIGHISGCHINPAVSIGLWAAKRFPATELLPYIAAQVLGGIAGAGVLYLIAGGKAGFSLSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGSTD-RRAPKG-----FAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPALFVG-DWAIAELWLFWLAPIVGAALAGLF 223          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.268e-27
Identity = 85/224 (37.95%), Postives = 124/224 (55.36%), Query Frame = 1
Query:  166 RAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            +A +AEFIAT LF++  V + +  G + +       G+  IA A    +FV V   A  SGGH+NPAVT GL +   +++   LFY V Q LGA     +++ F+  G+    A   + V+ G T+ +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A+      G   +W++WVGP  G GLA L
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLR-FVTHGK----AIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAG---NWVYWVGPLIGGGLAGL 230          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.268e-27
Identity = 78/228 (34.21%), Postives = 114/228 (50.00%), Query Frame = 1
Query:  145 LKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            L+S SF+RA  AEF AT  +++  + + +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA  YM  Q LGA+ GA V+         G LA   N +    + G     EI  T   V  +F+  D +R+ +   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVGP  G GL +L
Sbjct:    4 LRSASFWRAIFAEFFATLFYVFFGLGSSLRWAPG-----PLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTG---NFTNHWVYWVGPIIGGGLGSL 217          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.052e-27
Identity = 81/229 (35.37%), Postives = 124/229 (54.15%), Query Frame = 1
Query:  166 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAI-CGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGA----EIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFXGAGLAAL 828
            +AG+AEFI+TF+F++    + +   K  ++   +  G+   + A    +FV V   A ISGGH+NPAV  G F+   ++L R + Y++ Q LG+I C A +V               ++V A G ++G G+G     EI+ TF LVYTV++ A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++      W +HW++W GP  G G+A L
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLV-----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGL 230          
BLAST of CB290635 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.052e-27
Identity = 74/198 (37.37%), Postives = 106/198 (53.54%), Query Frame = 1
Query:  265 VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV----KGFMGAGQYGRLA--GGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW--DDHWIFWVGPFXGAGL-AALY 831
            +G+ G+A+AFG  +  + +    ISG H+NPAV+ GL +  +      L Y++ Q +GAI  AGV+     G  G      LA  G A+    GYT G G  +E++ T + +  +  ATDA+  A        AP+ IG A+ L+HL +IP+T T +NPARS G A+      GW     W+FWV P  GA +  ALY
Sbjct:   35 IGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPALFVG---GWALQQLWLFWVAPLIGAAIGGALY 223          
The following BLAST results are available for this feature:
BLAST of CB290635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
TIP21_MAIZE5.968e-2838.39Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP12_MAIZE5.968e-2835.71Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
MIP_CAVPO5.968e-2835.09Lens fiber major intrinsic protein OS=Cavia porcel... [more]
TIP2_TOBAC7.794e-2836.28Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC7.794e-2836.28Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
AQPZ_GLOVI1.330e-2734.91Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]
TIP22_MAIZE2.268e-2737.95Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
MIP_HUMAN2.268e-2734.21Lens fiber major intrinsic protein OS=Homo sapiens... [more]
TIP1_MEDSA5.052e-2735.37Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
AQPZ_PSEPK5.052e-2737.37Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cf10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cf10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290635 ID=CB290635; Name=CB290635; organism=Citrus sinensis; type=EST; length=831bp
GCAGAAATGGAAGGTAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTT
CGCCGAGAGGCAGCCGATTGGGACGGCGGCTCAGACCCAAGATGGGAAGG
ACTACCCTGAGCCCCCACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAG
TCTTGGTCGTTTTACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCT
TTTCTTGTACATCTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAATA
CCAAGTGCTCAACCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGC
ATGATCTTCGTGCTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATAT
CAACCCGGCGGTGACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGA
CACGTGCACTTTTCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGT
GCTGGCGTTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGC
CGGCGGTGCCAACGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTG
GTGCCGAGATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCC
ACTGATGCCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCC
TCTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCTACCATCCCAA
TTACCGGAACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCATC
TACAACAAGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGACC
ATTCGNTGGAGCTGGACTTGCAGCTTTGTAC
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