CB290668

Overview
NameCB290668
Unique NameCB290668
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290668 vs. ExPASy Swiss-Prot
Match: THI4_HALWD (Putative thiazole biosynthetic enzyme OS=Haloquadratum walsbyi (strain DSM 16790) GN=HQ1276A PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.102e-18
Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 2
Query:  266 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDS----YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 799
            +F  + E+ V+R + + +  + I   DT+    G G +GL  A EL++   + + I+E++   GGG WL G L + + VR PA   LDEL + Y+E D     YV     A+ +S I S   A   V+  N     D++ +   RVGG+V NW  V       +C+DP  +E+ +VV S GHD
Sbjct:    5 EFADVSEAQVTRAIAKDWGNEFIDRVDTEVIIVGGGPSGLVTAKELAER-GVDVTIVEKNNYLGGGFWLGGFLMNKVTVRDPAQSVLDELDVPYEESDEASGLYVADGPHAV-SSLIKSACDAGAEVQ--NMTEFTDVVTRENHRVGGIVLNWTPVHALPRELTCVDPVAVESDLVVDSTGHD 183          
BLAST of CB290668 vs. ExPASy Swiss-Prot
Match: THI4_NATPD (Putative thiazole biosynthetic enzyme OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=NP5174A PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18
Identity = 54/180 (30.00%), Postives = 94/180 (52.22%), Query Frame = 2
Query:  266 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 799
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A ELS+   +Q  ++E++   GGG WL G L + + VR PA   L++L +D+   QDS  +         + + K       K+ N     D++++   RVGG+V NW  V       +C+DP  +EA +V+ + GHD
Sbjct:    6 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELSER-GVQTMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQNVLEDLDVDFKRSQDSEGLYVANGPEACSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVEADLVIDATGHD 184          
BLAST of CB290668 vs. ExPASy Swiss-Prot
Match: THI4_AERPE (Putative thiazole biosynthetic enzyme OS=Aeropyrum pernix GN=APE_2149.1 PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.659e-17
Identity = 52/177 (29.38%), Postives = 90/177 (50.85%), Query Frame = 2
Query:  269 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 799
            F  + E+ V+  +   + + +  +  +D    GAG AGL+ A+ L++    ++ I+EQ+   GGG WL G   + + +R PA   LDEL + Y+     +      L  + + ++ L     ++ N    +D+IV+  RV GVV NW+ V       +C+DP  + A+ VV + GHD
Sbjct:    3 FARVNEADVTEAILDGFYSSLKKHLRSDVIVVGAGPAGLTAAWRLAE-AGARVLIVEQNNYLGGGLWLGGYFMNPVTIRAPAQRILDELEVPYEAVKPGLYRTKGPLLAAKLAARAL-EAGAEVLNLTMLDDVIVENSRVAGVVVNWSPVQGLPRQITCVDPVGLRAEYVVDATGHD 177          
BLAST of CB290668 vs. ExPASy Swiss-Prot
Match: THI4_METMJ (Putative thiazole biosynthetic enzyme OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_2251 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 55/176 (31.25%), Postives = 86/176 (48.86%), Query Frame = 2
Query:  278 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 799
            + E  +SR +       +I + + D    G G +GL+CA  L +   ++ A+IE+ +S GGG W  G +F  +VV++ A   LD  GI Y   ++ Y V K         ++       V+ FN    ED++++G GR+GG+V NW  V M       +DP  M     V + GHD
Sbjct:    3 LNEVTISRAILEEQHRALIDHLEMDAAVIGGGPSGLACAALLGEK-GVKCALIEKKLSIGGGMWGGGMMFPRIVVQEDARRLLDRFGIAYKAFEEGYYVAKSVEAVAK--LTAAACDAGVEFFNLTTVEDVMIRGDGRIGGLVVNWTPVDM---AGLHVDPLTMACTCTVDATGHD 172          
BLAST of CB290668 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.723e-16
Identity = 54/178 (30.34%), Postives = 93/178 (52.25%), Query Frame = 2
Query:  278 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 799
            + E I++R +   Y    + Y D D    G G A L  A  L++   +++A+ EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E +S   + ++       + KL+A       ++FN V+ ED++++   RV G+V NW  V+     +  +DP ++  K+V+   GH+
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTDIDVALVGGGPANLVAAKYLAE-AGVKVALYEQKLSLGGGMWAGGMMFPRIVVQEEATRILDDFGIRYKEYESGYYVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHE 172          
BLAST of CB290668 vs. ExPASy Swiss-Prot
Match: THI4_METMA (Putative thiazole biosynthetic enzyme OS=Methanosarcina mazei GN=MM_0222 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.839e-16
Identity = 55/178 (30.90%), Postives = 91/178 (51.12%), Query Frame = 2
Query:  278 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 799
            + E I++R +   Y    + Y D D    G G A L  A  L++    ++AI EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E +    + ++       + KL+A       ++FN V+ ED++++   RV G+V NW  V+     +  +DP ++  K+V+   GHD
Sbjct:    3 LDEVIITRAIFEEYSKTFLEYTDIDVALVGGGPANLVAAKYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRVLDDFGIRYKEYEPGYFVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHD 172          
BLAST of CB290668 vs. ExPASy Swiss-Prot
Match: THI4_DESOH (Putative thiazole biosynthetic enzyme OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=Dole_2426 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.014e-16
Identity = 55/175 (31.43%), Postives = 89/175 (50.86%), Query Frame = 2
Query:  278 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYD--EQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGH 796
            + E  +SR +  R+   +I   + D    G G +GL  A+ L++    ++A+ E+ +S GGG W    LF+ +VV+K A   LD + I Y    +D Y      A+ T T  +   A+  V +FN V  ED++++  R+ G+V NW+ V M       +DP  M A  V+ + GH
Sbjct:    3 LNEVTISRAIIDRFYEKLIANLEVDVAVVGGGPSGLVAAWRLARAGR-KVALFERKLSIGGGMWGGAMLFNEIVVQKSALHVLDAMEIGYRLYAEDYYTADAVEAISTLTSQA---AKAGVAIFNCVTVEDVMIRPDRIVGLVLNWSPVEM---AGLHVDPLAMRASFVIDATGH 170          
BLAST of CB290668 vs. ExPASy Swiss-Prot
Match: THI4_METBF (Putative thiazole biosynthetic enzyme OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A2100 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.117e-15
Identity = 55/176 (31.25%), Postives = 88/176 (50.00%), Query Frame = 2
Query:  278 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 799
            + E I++R +   Y    + Y + D    G G A L  A  L++    ++AI EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E Q  Y V          I     A    ++FN V+ ED++++   RV G+V NW  V++    +  +DP ++  K+V+   GH+
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTEVDVALIGGGPANLVAARYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRILDDFGIRYKEYQPGYYVANSVESVGKLISGATSA--GAEVFNLVSFEDVMIRENDRVTGIVVNWGPVTVQ---RLHVDPLMIRTKLVIDGTGHE 172          
BLAST of CB290668 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.244e-15
Identity = 54/183 (29.51%), Postives = 90/183 (49.18%), Query Frame = 2
Query:  257 NTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 799
            ++ K   I E  +SR + ++ M D + + + D    GAG AG+S AY L+K+  ++  + E+ +S GGG      LF  +V+  PA   L E+ I  ++ +  V I  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD
Sbjct:    3 DSIKIKAIDEVKISRYIIKQTMEDWMNFVENDVVIVGAGPAGMSAAYYLAKH-GLKTLVFERRLSFGGGIGGGAMLFHKLVIESPADEVLKEMNIRLEKVEDGVYIVDSAEFMAKLAASAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---AGLHVDPVFISAKAVVDATGHD 180          
BLAST of CB290668 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.543e-15
Identity = 55/179 (30.73%), Postives = 91/179 (50.84%), Query Frame = 2
Query:  278 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 799
            + E  ++R +   Y+   +   D D    GAG A L  A  L++  ++++ + E+ +S GGG W  G +F  +VV+K A   LDE  I Y E ++ Y V       +  +++KL A       +L N V+ ED++++ G R+ G+V NW    M       +DP  + A+VV+   GHD
Sbjct:    3 LDEVKITRAIVESYLESFLKCTDVDVALVGAGPANLVAAKRLAE-ADVRVVLFEKRLSVGGGLWGGGMMFPRIVVQKEACRILDEYDIWYREFEEGYYVAD-----SIEVVAKLTAGAIDAGAELINLVSVEDVMIREGDRIVGLVINWTAADM---AGIHVDPLAIRARVVIDGTGHD 172          
The following BLAST results are available for this feature:
BLAST of CB290668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
THI4_HALWD4.102e-1833.88Putative thiazole biosynthetic enzyme OS=Haloquadr... [more]
THI4_NATPD9.137e-1830.00Putative thiazole biosynthetic enzyme OS=Natronomo... [more]
THI4_AERPE2.659e-1729.38Putative thiazole biosynthetic enzyme OS=Aeropyrum... [more]
THI4_METMJ5.923e-1731.25Putative thiazole biosynthetic enzyme OS=Methanocu... [more]
THI4_METAC1.723e-1630.34Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METMA3.839e-1630.90Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_DESOH5.014e-1631.43Putative thiazole biosynthetic enzyme OS=Desulfoco... [more]
THI4_METBF1.117e-1531.25Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_SULAC4.244e-1529.51Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METTP5.543e-1530.73Putative thiazole biosynthetic enzyme OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ch03_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ch03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290668 ID=CB290668; Name=CB290668; organism=Citrus sinensis; type=EST; length=812bp
GCACTGCTGCAAATCAAATTACTTCTCATTATCAAACTTCTAAGCAGCAG
GGGAAGGAGGGGTAAAAAAAAAAAACATGGCAGCCATGGCTTCTACAGCT
TTCGCTCCTTCAGTTTCGTCTACCACCAATAAGCTCTTTGACTCATCCTT
TCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAAT
CTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTAT
GACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCG
TGAAATGACGCGCAGGTACATGACGGACATGATCACTTATGCTGACACTG
ATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAG
CTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAG
CCCCGGCGGTGGCGCGTGGCTCAGTGGACAGCTCTTCTCTGCCATGGTTG
TGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGAT
GAGCAAGACAGCTATGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCAC
TATAATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAG
TGGCAGCCGAGGACTTGATAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTG
ACCAACTGGGCGTTGGTGTCAATGAATCACGATACACAGTCTTGCATGGA
TCCCAATGTAATGGAAGCGAAAGTGGTTGTGAGCTCTTGTGGCCATGATG
GGCCTTTTGGGG
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