CB290669
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_LEIIN (60S acidic ribosomal protein P0 OS=Leishmania infantum GN=LIPO-A PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.961e-30 Identity = 76/199 (38.19%), Postives = 109/199 (54.77%), Query Frame = 1 Query: 205 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIP-------LLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 K Y+ +L L +Y+ +L DNV S Q+ ++ R LR + +MGK T+ + + A+ + LL GN GLIFT + ARVG ++P DV+V G+TG++P+QTSFFQ LNI TKI KG VEI+T +++ GDKV +S A LL KL I PF Y + V SV++ G ++ Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVGRALRAKAEFMMGKKTLQGKIVEKRAQAKDASPEAKHFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDAHRVKRAARVGAISPCDVIVAAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNISPFYYQVNVLSVWDRGVLF 206
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_ENCCU (60S acidic ribosomal protein P0 OS=Encephalitozoon cuniculi GN=RPP0 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.454e-30 Identity = 76/202 (37.62%), Postives = 117/202 (57.92%), Query Frame = 1 Query: 175 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 M K +K K++ Y+ + +L E Y++ + +NV S QL++I+R G++ +LMGKN+ ++R I G + L++G+V +F KG+ A A+VG VA DV V TG+ P +TS+FQ L I TKI KG VEII+P +++ +GDKVG S+A LL L I+PF Y + + +YE+G +Y Sbjct: 25 MTRKDAKERKELTYE-RARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSAIRRAIA----DLGKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVIY 221
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_METVO (Acidic ribosomal protein P0 homolog (Fragment) OS=Methanococcus voltae GN=rplP0 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.842e-21 Identity = 64/186 (34.41%), Postives = 94/186 (50.54%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 L +LL+ I + V S QLQ IR +R + M +NT+MKR I AE+TGN +F LI ++ LI T+ + AP + G AP D+ + G+TG+ P S + + +P I KG + I + ++GD V + A +L+KL I+P GL V VYE+G VY Sbjct: 21 LKELLKSGNVIALIDMMEVPSVQLQEIRDTIRDSMTLKMSRNTLMKRAIEEVAEETGNPSFTKLIDCMEKGAALIATEMNPFKLYKTLNESKSPAPIKAGATAPCDIEIKAGSTGMPPGPFLSELKAVGLPAAIEKGKIGIKEDTIVAKEGDVVSAKLAVVLSKLDIKPMEVGLNVLGVYEDGIVY 206
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_METM5 (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rplP0 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.354e-20 Identity = 59/186 (31.72%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 L +LL+ + I + V + QLQ IR +R + M +NT+MKR I AE+TGN F L+ + +I T+ + AP + G VAP D+ + G+TG+ P S + + +P I+KG + I ++++G+ V + +L+ LGI+P + GL V VYE+G +Y Sbjct: 21 LKELLKSSSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLVDYMDKGAAIIATEMNPFKLYKTLDESKSPAPVKGGAVAPCDIEIKAGSTGMPPGPFLSELKAVGLPAAIDKGKIGIKEDTVVVKEGEVVSQKLSVVLSALGIKPVTVGLNVLGVYEDGIIY 206
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_METM6 (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rplP0 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.993e-20 Identity = 63/186 (33.87%), Postives = 94/186 (50.54%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 L +LL+ + I + V + QLQ IR +R + M +NT+MKR I AE+TGN F L L +I T+ + AP + G AP D+ V G+TG+ P S + + IP I+KG + I +I++G+ V A +L+ LGI+P + GL V VYE+G +Y Sbjct: 21 LKELLKSTSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLADYLDKGAAIIATEMNPFKLFKTLDESKSPAPVKGGATAPCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVIKEGEVVSQKLAVVLSALGIKPVTVGLNVLGVYEDGVIY 206
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_THESM (Acidic ribosomal protein P0 homolog OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rplP0 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.133e-20 Identity = 63/199 (31.66%), Postives = 100/199 (50.25%), Query Frame = 1 Query: 187 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 A AE K +L +LL++Y I + +V + L +R LR +V+ + +NT+++ ++ A++ ++ LI +QG G++ TK + APA+ G AP DVVVP G T L P Q L IP +I KG V I +++ G+ + A +L +LGI P GL + + YE+G VY Sbjct: 2 AHVAEWKKKEVEELTKLLQDYPVIALVDVADVPAYPLSKMRESLRDKAVLRVSRNTLIELALKKAAQELNDSNLEKLIEHIQGGTGILVTKINPFKLYKFLEESKKPAPAKAGAPAPRDVVVPAGPTPLSPGPLVGEMQALGIPARIEKGKVSIQKDTVVLKAGEIITPQLANILNQLGIEPLEVGLKLLAAYEHGIVY 200
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_METM7 (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rplP0 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.133e-20 Identity = 62/186 (33.33%), Postives = 94/186 (50.54%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 L +LL+ + I + V + QLQ IR +R + M +NT+MKR I AE+TGN F L L +I T+ + AP + G AP D+ V G+TG+ P S + + IP I+KG + I ++++G+ V A +L+ LGI+P + GL V VYE+G +Y Sbjct: 21 LKELLKSTSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLADYLDKGAAIIATEMNPFKLFKTLDESKSPAPVKGGATAPCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVVKEGEVVSQKLAVVLSALGIKPVTVGLNVLGVYEDGVIY 206
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_METVS (Acidic ribosomal protein P0 homolog OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rplP0 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.558e-19 Identity = 59/186 (31.72%), Postives = 93/186 (50.00%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 L +LL+ I + V + QLQ IR +R + M +NT++KR + AE+TGN F L+ L ++ T+ + AP + G +AP D+ V G+TG+ P S + + IP I+KG + I + ++GD + A +L+ LGI+P + GL V VYE G +Y Sbjct: 21 LKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVEEVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPKLAVVLSALGIKPVTVGLNVLGVYEEGVIY 206
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_HALSA (Acidic ribosomal protein P0 homolog OS=Halobacterium salinarium GN=rplP0 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.558e-19 Identity = 57/188 (30.32%), Postives = 97/188 (51.60%), Query Frame = 1 Query: 220 AKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 A+L LLE Y + V + S QLQ++RRGL G + + M +NT++ R + E+ G+ L ++G VGL+ T + AP G VAP D+VVP G+TG+DP Q + +I +G+++++ + +G+ V + +L++LGI P GL ++ V+ G ++ Sbjct: 21 AELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAGD-GLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVLF 203
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_HALS3 (Acidic ribosomal protein P0 homolog OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.558e-19 Identity = 57/188 (30.32%), Postives = 97/188 (51.60%), Query Frame = 1 Query: 220 AKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 A+L LLE Y + V + S QLQ++RRGL G + + M +NT++ R + E+ G+ L ++G VGL+ T + AP G VAP D+VVP G+TG+DP Q + +I +G+++++ + +G+ V + +L++LGI P GL ++ V+ G ++ Sbjct: 21 AELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAGD-GLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVLF 203 The following BLAST results are available for this feature:
BLAST of CB290669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290669 ID=CB290669; Name=CB290669; organism=Citrus sinensis; type=EST; length=780bpback to top |