CB290669
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_METS3 (Acidic ribosomal protein P0 homolog OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rplP0 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.234e-16 Identity = 54/199 (27.14%), Postives = 100/199 (50.25%), Query Frame = 1 Query: 187 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 A AE K +L L+++Y I + N+ + QLQ +R+ L +V+ M K ++ + N ++L ++G V +I T+ + APA+ G +A D+V+P G+TG +P Q + IP KI+KG + + L+ G++V ++ A+ L+++ I P G+ +++VYE ++Y Sbjct: 2 AHVAEWKKEEVNELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLIDLALEDCNASKNN--IVDLSEHMEGQVAVIATEMNPFKLYKILEDSKTSAPAKPGAIATDDIVIPEGDTGFEPGPFLGELQQVGIPAKIDKGKIVVSKETVLVEAGEEVSAAVASTLSRMDINPMEVGIDLRAVYEEEAIY 198
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_METKA (Acidic ribosomal protein P0 homolog OS=Methanopyrus kandleri GN=rplP0 PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.612e-16 Identity = 59/198 (29.80%), Postives = 98/198 (49.49%), Query Frame = 1 Query: 196 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRG-DSVVLMGKNTMMKRTIRMHAEKTGNTAFLN-LIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 AE K +L +L++EY + + + + + QLQ IR LR D+++ M +NT+M+ + EK L L+ ++G V IFT D APA+ G +AP D+VVP G T +P S Q +P +I G V I L+++G+++ A +L KL I P G+ + ++ G+++ Sbjct: 18 AEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIALE---EKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILKKLEIEPMEVGVDIVAIVAEGTLF 212
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_PYRFU (Acidic ribosomal protein P0 homolog OS=Pyrococcus furiosus GN=rplP0 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16 Identity = 56/200 (28.00%), Postives = 99/200 (49.50%), Query Frame = 1 Query: 187 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVL-MGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 A AE K +L L++ Y + + ++ + L +RR +R ++ +L + +NT+++ I+ A++ G LI ++G G++ T + APA+ G P DVV+P G T L P Q + IP +I +G V I +++ G+++ A +L LGI+P GL + +VYE+G +Y Sbjct: 2 AHVAEWKKKEVEELANLIKSYPVVALVDVSSMPAYPLSQMRRLIRENNGLLRVSRNTLIELAIKKVAQELGKPELEKLINYIEGGAGILVTTMNPFKLYKFLQQNRQPAPAKPGAKVPKDVVIPAGPTSLAPGPIVGQMQAMGIPARIERGKVTIQKDTVVLKAGEEITPELANILNALGIQPLEVGLDLLAVYEDGIIY 201
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_PYRAB (Acidic ribosomal protein P0 homolog OS=Pyrococcus abyssi GN=rplP0 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 58/200 (29.00%), Postives = 95/200 (47.50%), Query Frame = 1 Query: 187 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVL-MGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 A AE K +L L++ Y I + ++ + L +RR +R + +L + +NT+++ I+ A++ G L + G++ T + APA+ G V P DVV+P G T L P Q + IP +I +G V I +++ G+ + A +L LGI+P GL V +VYE+G VY Sbjct: 2 AHVAEWKKKEVEELANLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAQELGKPELEKLAEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVIPAGPTPLAPGPIVGQMQAMGIPARIERGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVY 201
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_METST (Acidic ribosomal protein P0 homolog OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rplP0 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.040e-15 Identity = 50/188 (26.60%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 220 AKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 A+L L + I + ++ + QLQ +R+ L ++++ M + K I++ E + L L+G ++FTK + APA+ G +AP D+VVP G+T P Q + IP KI+KG++ + +++ +G+++ + A +L KL I P G+ + +V E ++Y Sbjct: 13 AELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSR----KNFIKIALENSDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEIPKAVADILTKLEIHPMEVGIDLLAVCEGDTIY 196
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_HALMA (50S ribosomal protein L10E OS=Haloarcula marismortui GN=rplP0 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.040e-15 Identity = 49/186 (26.34%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 + +++E Y + V + S QLQ++RR L G + + + +NT+++R + + +L + G VGLI T + AP G VAP D+V+P G+TG+DP Q + +I +G++++++ ++ G++V + +L +LGI P GL +++V+ +G ++ Sbjct: 23 IVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL-----DDVDDGLEDLNGYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPEGDTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELSNVLNELGIEPKEVGLDLRAVFADGVLF 203
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_THEGJ (Acidic ribosomal protein P0 homolog OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rplP0 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.971e-15 Identity = 54/199 (27.14%), Postives = 93/199 (46.73%), Query Frame = 1 Query: 187 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 A AE K +L ++++ + I + V + L +R LRG +++ + +NT+++ I+ A++ L ++G ++ T+ + APA+ G V P DVV+P G T L P Q L IP +I KG V I +++ G+ + A +L LGI P GL + + YE+ +Y Sbjct: 2 AHVAEWKKKEVEELTKIIKSHPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELNKPDLEKLADYIEGGAAILATEMNPFKLYKLLEESKTPAPAKPGAVVPKDVVIPAGPTSLAPGPLVGEMQALGIPARIEKGKVTIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAYEDDIIY 200
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_PICTO (Acidic ribosomal protein P0 homolog OS=Picrophilus torridus GN=rplP0 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.279e-13 Identity = 52/196 (26.53%), Postives = 87/196 (44.39%), Query Frame = 1 Query: 196 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPS-QTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 A+ KI + L + + + + +N+ Q IR +R + + + + R +R+ E TG + L G V LI T APA+ G +A D+V+ P T P + S FQ +P I KG + I + V ++KGD + +A +L L I P + GL + + YE+G ++ Sbjct: 5 AQWKIDFVKNLENEINSRKVAAIVSIKGLRNNEFQKIRNSIRDKARIKVSR----ARLLRLAIENTGKNNIVKLKDYAHGQVALITTDESPKKIYDILEKSKTKAPAKGGEIAEEDIVIEPKETNFPPGPKISEFQKAGLPAAIEKGKIVIKSEVTFVKKGDVITREKALVLKDLEIYPITAGLDLIAAYEDGLIF 196
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_SULTO (Acidic ribosomal protein P0 homolog OS=Sulfolobus tokodaii GN=rplP0 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12 Identity = 55/195 (28.21%), Postives = 86/195 (44.10%), Query Frame = 1 Query: 196 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSV 777 A+ KI +L Q L EY I++A + +++L +IR+ +RG + + + KNT+ A K L P L G IFT + A G A +VV+P G+TG+ S F L I TK+ G + + + + GD + +L KLGI P L ++ Y+NG + Sbjct: 14 AKWKIEEVKELEQKLREYHTIIIANIEGFPADKLHDIRKKMRGMAEIKVTKNTLFGI-----AAKNAGLDVSKLEPYLTGPNAFIFTNKNPFEIQLFLSKFKLKRYAMPGDKADEEVVIPAGDTGMPAGPALSIFGKLKIKTKVQDGKIHVTQDTVIAKPGDPIPPDAIPILQKLGIMPVHIKLNIKVAYDNGLI 203
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_ARCFU (Acidic ribosomal protein P0 homolog OS=Archaeoglobus fulgidus GN=rplP0 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.154e-12 Identity = 49/200 (24.50%), Postives = 94/200 (47.00%), Query Frame = 1 Query: 181 VKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSV 777 V+ S E K+ ++ +++ + + + NV + Q+Q IRR RG + + + KNT+++R + + G +L L L + +I + +P + V+P+DVVV G T + P + Q+ +P I KG V + +++ G+ V A L +L I+P GL V+++ ++G + Sbjct: 4 VRGSPPEYKVRAVEEIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL----DALGGD-YLKLKDYLGDQIAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPPGPLMAELQMAGLPVAIEKGKVVVKATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVI 198 The following BLAST results are available for this feature:
BLAST of CB290669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290669 ID=CB290669; Name=CB290669; organism=Citrus sinensis; type=EST; length=780bpback to top |