CB290669
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_SULIY (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.196e-11 Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 1 Query: 196 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSV 777 A K+ +L +L++ IL+ + + +++L IR+ LRG +++ + KNT+ K A K + L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKI-----AAKNAGISTEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLV 203
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_SULIN (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rplP0 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.196e-11 Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 1 Query: 196 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSV 777 A K+ +L +L++ IL+ + + +++L IR+ LRG +++ + KNT+ K A K + L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKI-----AAKNAGISTEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLV 203
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_SULIL (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.196e-11 Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 1 Query: 196 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSV 777 A K+ +L +L++ IL+ + + +++L IR+ LRG +++ + KNT+ K A K + L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKI-----AAKNAGISTEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLV 203
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_SULIM (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.561e-11 Identity = 52/195 (26.67%), Postives = 86/195 (44.10%), Query Frame = 1 Query: 196 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSV 777 A K+ +L +L++ IL+ + + +++L IR+ LRG +++ + KNT+ K A K L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKI-----AAKNAGINIEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLV 203
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_SULIK (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rplP0 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.561e-11 Identity = 52/195 (26.67%), Postives = 86/195 (44.10%), Query Frame = 1 Query: 196 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSV 777 A K+ +L +L++ IL+ + + +++L IR+ LRG +++ + KNT+ K A K L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKI-----AAKNAGINIEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLV 203
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_SULIA (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain M.16.27) GN=rplP0 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.663e-11 Identity = 52/195 (26.67%), Postives = 86/195 (44.10%), Query Frame = 1 Query: 196 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSV 777 A K+ +L +L++ IL+ + + +++L IR+ LRG +++ + KNT+ K A K L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKI-----AAKNAGINTEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLV 203
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_METBF (Acidic ribosomal protein P0 homolog OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rplP0 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.663e-11 Identity = 44/186 (23.66%), Postives = 84/186 (45.16%), Query Frame = 1 Query: 226 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 + +L++ + + + + + ++Q IRR L+ +V+ + +N++ +R + E + + L L+FT +P + G +AP D++V G T P Q IP I+ G V + + + G+ V A +L KL I P GL +++VY+NG++Y Sbjct: 22 IMELIQSHKVFGMVGIEGILATKIQKIRRDLKDVAVLKVSRNSLTERALNQLGE-----SIPEMNKYLDKQTALVFTNESPFKLYKVLEQTKTPSPIKGGAIAPADIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEVVSQKLATMLTKLEIYPLIVGLDLRAVYDNGAIY 202
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_METBU (Acidic ribosomal protein P0 homolog OS=Methanococcoides burtonii (strain DSM 6242) GN=rplP0 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11 Identity = 48/183 (26.23%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 235 LLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 L+E Y V + + + QLQ++RR L+ +V+ + +N++ +R + ++ + + LIFTK + +P + G+VA D++V G T P Q IP I+ G V I + + G+ V AA+L +L I P GL +++V E GS++ Sbjct: 24 LIESYPLFGVIGIEGIPAKQLQSMRRDLKDFAVLKVCRNSLTRRALDQSSDDV-----KKMDDYIDVQTALIFTKQNPFKLYKLLEKSKTPSPIKAGMVATSDIIVEKGPTSFPPGPILGDMQGAGIPAAIDGGKVVIKETKAVAKAGEVVSQKLAAMLTRLEIYPLEVGLDLRAVLEEGSIF 201
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_METMA (Acidic ribosomal protein P0 homolog OS=Methanosarcina mazei GN=rplP0 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.543e-11 Identity = 44/184 (23.91%), Postives = 83/184 (45.11%), Query Frame = 1 Query: 232 QLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 780 +L++ + + + + + ++Q IRR L+ +V+ + +NT+ +R + E + + L LIFT +P + G +AP D++V G T P Q IP I+ G V + + + G+ V A +L+KL I P GL +++ Y++G++Y Sbjct: 24 ELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQLGE-----SIPEMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIY 202
BLAST of CB290669 vs. ExPASy Swiss-Prot
Match: RLA0_SULSO (Acidic ribosomal protein P0 homolog OS=Sulfolobus solfataricus GN=rplP0 PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11 Identity = 53/195 (27.18%), Postives = 84/195 (43.08%), Query Frame = 1 Query: 196 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSV 777 A K+ +L +L++ IL+ + +++L IR+ LRG + + + KNT+ K A K L L G IFTK + A G A +VV+P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKI-----AAKNAGIDIEKLEQYLTGPNVFIFTKDNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPILQKLGIMPVYVKLKIKVAYHEGLV 203 The following BLAST results are available for this feature:
BLAST of CB290669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290669 ID=CB290669; Name=CB290669; organism=Citrus sinensis; type=EST; length=780bpback to top |