CB290676
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290676 vs. ExPASy Swiss-Prot
Match: RLSX_METTH (Fused L13/S9 ribosomal protein OS=Methanobacterium thermoautotrophicum GN=rpl13p/rps9p PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.385e-26 Identity = 65/133 (48.87%), Postives = 84/133 (63.16%), Query Frame = -1 Query: 213 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKFYR 611 G++KTA+A + G+G ++IN P+EL PE+ R K EP+ L G N VD+ +RV GGG Q A R IA+ LV D S ++K+ V+YDRT+LV DPRR EPKK+GGRGARAR QK YR Sbjct: 158 GKRKTAIARGTIREGKGRVRINKVPVELYTPELARLKIMEPLKLAG-DVINDVDINVRVVGGGIVGQAEAARMVIARGLV-------DWTSDMDLKEKFVQYDRTMLVGDPRRSEPKKYGGRGARARRQKSYR 282
BLAST of CB290676 vs. ExPASy Swiss-Prot
Match: RS9_METST (30S ribosomal protein S9P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps9p PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.068e-26 Identity = 68/137 (49.64%), Postives = 82/137 (59.85%), Query Frame = -1 Query: 213 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKFYR 623 V G++KTA+A K G G +K+N P+EL EPE+ R K FEP+ L G N VD+ +RV GGG Q A R IAK LV + +KD V+YDRT+LV DPRR E KKFGG GARAR QK YR Sbjct: 5 VHTSGKRKTAIARGTVKEGTGRVKVNRKPVELYEPELARLKIFEPLELAG-DIVNSVDINVRVVGGGIMGQAEAARMVIAKGLVEY-------TGDMNLKDRYVQYDRTMLVGDPRRSESKKFGGPGARARKQKSYR 133
BLAST of CB290676 vs. ExPASy Swiss-Prot
Match: RS9_METKA (30S ribosomal protein S9P OS=Methanopyrus kandleri GN=rps9p PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25 Identity = 59/137 (43.07%), Postives = 86/137 (62.77%), Query Frame = -1 Query: 213 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKFYR 623 VQ G++KTA+A + G G +++N P+ ++EPE+ R K EP+++ G + VD+ ++V+GGG SQ A R +IA+ LV + +++D + YDR +L DPRR EPKKFGGRGARAR QK YR Sbjct: 5 VQTTGKRKTAIARAVIREGEGRVRVNKRPVNIIEPEMARMKIMEPLIIAGEDIVSQVDIDVKVQGGGWMSQAEAARIAIARGLVEW-------TGDPDLRDAYMAYDRHMLKGDPRRKEPKKFGGRGARARRQKSYR 134
BLAST of CB290676 vs. ExPASy Swiss-Prot
Match: RS9_PYRHO (30S ribosomal protein S9P OS=Pyrococcus horikoshii GN=rps9p PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.444e-25 Identity = 60/139 (43.17%), Postives = 87/139 (62.59%), Query Frame = -1 Query: 213 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKFYR 623 +Q G++KTA+A + GRG ++ING P+E++EPEI RF EP++L G +N VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV DPRR EP K +G RA+ QK YR Sbjct: 4 IQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAARIAIARALVEW-------TGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
BLAST of CB290676 vs. ExPASy Swiss-Prot
Match: RS9_PYRAB (30S ribosomal protein S9P OS=Pyrococcus abyssi GN=rps9p PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.444e-25 Identity = 61/139 (43.88%), Postives = 87/139 (62.59%), Query Frame = -1 Query: 213 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKFYR 623 +Q G++KTA+A + G+G ++ING P+ELVEPEI RF EP++L G +N VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV DPRR EP K +G RA+ QK YR Sbjct: 4 IQTTGKRKTAIARAVIREGKGRVRINGKPVELVEPEIARFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAARIAIARALVEW-------TGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
BLAST of CB290676 vs. ExPASy Swiss-Prot
Match: RS9_PYRFU (30S ribosomal protein S9P OS=Pyrococcus furiosus GN=rps9p PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.874e-25 Identity = 59/139 (42.45%), Postives = 87/139 (62.59%), Query Frame = -1 Query: 213 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKFYR 623 +Q G++KTA+A + G+G ++ING P+E++EPEI RF EP++L G +N VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV DPRR EP K +G RA+ QK YR Sbjct: 4 IQTTGKRKTAIARAVIREGKGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSVDIDVKVEGGGFMGQAEAARMAIARALVEW-------TGDMSLKEKFMKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
BLAST of CB290676 vs. ExPASy Swiss-Prot
Match: RS9_THEVO (30S ribosomal protein S9P OS=Thermoplasma volcanium GN=rps9p PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.890e-23 Identity = 62/133 (46.62%), Postives = 84/133 (63.16%), Query Frame = -1 Query: 213 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKFYR 611 G++KTAVA K+G+G+I ING P EL E+LR K EP+ L + G+D+ ++VKGGG T Q A R +IA+ +V F Q E++++ +YDRTL+V D R PKK GGRGARA+ QK YR Sbjct: 8 GKRKTAVARAVVKKGKGIITINGTPAELYPVEVLRNKILEPV-KLAEDKAKGIDVTVKVKGGGVTGQADASRTAIARGIVKFLQ-------DNELENLFRQYDRTLIVNDVRIKLPKKPGGRGARAKKQKSYR 132
BLAST of CB290676 vs. ExPASy Swiss-Prot
Match: RS9_HALSA (30S ribosomal protein S9P OS=Halobacterium salinarium GN=rps9p PE=3 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 5.498e-23 Identity = 61/133 (45.86%), Postives = 78/133 (58.65%), Query Frame = -1 Query: 213 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKFYR 611 G+KKTAVA G G ++IN P+ELVEPE+ R K EP + G VD+ I V GGG Q A+R +IA+ LV Y E++D +DR+LLV D R+ E KK+GG GARAR+QK YR Sbjct: 7 GKKKTAVARATVSDGEGRVRINSQPVELVEPEMARLKMLEPFRISGSDLRGDVDIDIDVAGGGFAGQADAVRTAIARGLVEHY-------GDAELRDAFREFDRSLLVNDVRQRESKKWGGPGARARYQKSYR 132
BLAST of CB290676 vs. ExPASy Swiss-Prot
Match: RS9_THEAC (30S ribosomal protein S9P OS=Thermoplasma acidophilum GN=rps9p PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.225e-22 Identity = 60/133 (45.11%), Postives = 88/133 (66.17%), Query Frame = -1 Query: 213 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKFYR 611 G++KTAVA K+G+G++ ING P+EL +LR K EP LL+ + +D+ ++V+GGG T Q A R +IA+A+V KY+++ E++++ +YDRTL+V D R PKK GGRGARA+ QK YR Sbjct: 5 GKRKTAVARAVAKKGKGIVTINGYPVELYPVRVLRNKIMEP-LLIAEDKAKDLDIAVKVRGGGVTGQADASRTAIARAIV----KYLND---TELENLFRQYDRTLIVNDVRIKLPKKAGGRGARAKKQKSYR 129
BLAST of CB290676 vs. ExPASy Swiss-Prot
Match: RS9_HALMA (30S ribosomal protein S9P OS=Haloarcula marismortui GN=rps9p PE=1 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 1.600e-22 Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = -1 Query: 213 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKFYR 611 G+KKTAVA + G G ++I+ P+ELV+PE+ + K EP + VD+ + V+GGG Q A R +IA+ L VD + E++D + +DR+LLV D R+ EPKK+GG GARAR+QK YR Sbjct: 7 GKKKTAVARATVREGEGRVRIDSQPVELVDPELAQLKMLEPFRIAEDDLRGEVDVEVSVEGGGVMGQADAARTAIARGL-------VDHTNDAELRDAFMEFDRSLLVNDVRQSEPKKWGGPGARARYQKSYR 132 The following BLAST results are available for this feature:
BLAST of CB290676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290676 ID=CB290676; Name=CB290676; organism=Citrus sinensis; type=EST; length=692bpback to top |