CB290677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.122e-30 Identity = 77/172 (44.77%), Postives = 109/172 (63.37%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 516 G++E+KRIEN +RQVTF+KRR GLLKKA+ELSVLCDAEVA+I+FS GKL+EF SS+SM KTL RY + P ++ + + + L LK LQ ++ G+ L L+ KEL+ LE+QL+ SL +R + + L E + KEQ N+TL++++ E Sbjct: 4 GKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEF-SSTSMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDL-LKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQRAELENETLRRQVQE 173
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 3.086e-29 Identity = 71/179 (39.66%), Postives = 113/179 (63.13%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS--QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN 531 G++ +KRI+N +NRQVTF+KRR GL+KKA EL++LCDA+V LI+FS G+LY+F SSSSM +ERYQ+ A E + + + Q+E L+ + + L + R LLGEE+ ++L+ L+ Q++MSL IR+ + Q + + + +L K L+ + N L+++ +Q N Sbjct: 4 GKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF-SSSSMKSIIERYQE----AGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKFNIAHQRN 177
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.086e-29 Identity = 71/155 (45.81%), Postives = 104/155 (67.10%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK 465 G++E+KRI+N +RQVTF+KRR+GL KKA ELS+LCDAEV L++FS+ +LY+F +SSSM +ERY + P ++A +L QQE L+ + LQ R LLG++L L+ ++L++LE +L+MSLK IR + M+D + EL K Sbjct: 4 GKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDF-ASSSMKSIIERYNETKED-PHQTMNASSEAKL-WQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 8.980e-29 Identity = 75/178 (42.13%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN 531 G++ +++I++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFSN KLY+F +SSS+ T+ER+ N E A E+ Q+E L+ +LQ + R L G EL L+ KEL+++E QL+MSL+ IR R Q + + + EL K L+ N L +++ +Q N Sbjct: 4 GKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDF-ASSSVKSTIERF---NTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQEN 177
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.173e-28 Identity = 72/177 (40.68%), Postives = 109/177 (61.58%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKC-NYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQ 525 G++E+KRIEN NRQVTF+KRR GLLKKA EL+VLCDA V ++IFS+ GK++E+CS + L+ L E+YQ N E N + LE++ ++K E L+ R G++L L ++ LE+QL+ S+ ++R+ + Q + L L+ KEQ+L + N L + + E Q Sbjct: 4 GKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQQILLEMT------RMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMINENQQ 174
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.173e-28 Identity = 76/172 (44.19%), Postives = 110/172 (63.95%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 516 G++E+KRIEN +RQVTF+KRR+GLLKKA ELSVLCDAEVA+I+FS GKL+E+ SS+ M +TL RY N+ + + + + E+ LK + LQ L G+ L PL KEL+SLE+QL +L +R + + + + L E + KEQ N+TL++++ E Sbjct: 4 GKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY-SSTGMKQTLSRYG--NHQSSSASKAEEDCAEVDI------LKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLRRQVQE 166
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.532e-28 Identity = 71/171 (41.52%), Postives = 107/171 (62.57%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 510 G++ ++RI+N +RQVTF+KRRNGLLKKA ELS+LCDAEV L++FS+ G+LYEF SS++M ++RY A E + E+ Q+E L+ + LQ S + L+GEEL L ++L+ LE +L++SL+ IR + + + EL K L+ + N L + L Sbjct: 4 GKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEF-SSTNMKTVIDRYT----NAKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSL 169
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.820e-28 Identity = 68/173 (39.31%), Postives = 108/173 (62.43%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGP-LNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 516 G+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ ++ +M + +ERY+ A +A + +QE + LK LQ+ R + G + +EL +LER L++ + IRS + Q M+ + L+ KE +L AN+ L+++++E Sbjct: 4 GKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYK----SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 5.820e-28 Identity = 68/173 (39.31%), Postives = 108/173 (62.43%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGP-LNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 516 G+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ ++ +M + +ERY+ A +A + +QE + LK LQ+ R + G + +EL +LER L++ + IRS + Q M+ + L+ KE +L AN+ L+++++E Sbjct: 4 GKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYK----SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.297e-27 Identity = 69/188 (36.70%), Postives = 111/188 (59.04%), Query Frame = 1 Query: 4 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNT---LQLNPSAE 558 ++E+KRIENK +RQVTF+KRRNGL++KA +LSVLCDA VAL++ S GKLY F S +++K L+RY K + A + L Q + L + YE L+ L+G + ++ L LE L+ +L R+ +T+ ML + L+ KE++L E N+ L ++ + V ++++P+ + Sbjct: 5 KLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQH---------ADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVLASQMENNHHVGAEAEMEMSPAGQ 183 The following BLAST results are available for this feature:
BLAST of CB290677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290677 ID=CB290677; Name=CB290677; organism=Citrus sinensis; type=EST; length=821bpback to top |