CB290677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.693e-27 Identity = 73/172 (42.44%), Postives = 107/172 (62.21%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS-SSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLM 513 G++E+KRIENK +RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS++GKL+E+CS SM + + RY + GA P R L E K++ LQ S + G++L +EL LE+QL+ +L +IR+ + + M + L+ E++L + N + Q LM Sbjct: 7 GKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTT-GASLPVEDNRVQL----YDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQWLM 173
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.773e-27 Identity = 68/168 (40.48%), Postives = 107/168 (63.69%), Query Frame = 1 Query: 4 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 507 ++++++I+N RQVTF+KRR GL KKA ELSVLCDA+VALIIFS+ GKL+EFC SSSM + LER+ + + + + E L+L ++ ++ R + GEEL L+ +EL+ LE+ L+ L ++ T++ ++ ++ELQ K L + NK L+Q+ Sbjct: 5 KIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFC-SSSMKEVLERHNLQSKNLEKLDQPSLE-LQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQ 170
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.927e-27 Identity = 71/171 (41.52%), Postives = 105/171 (61.40%), Query Frame = 1 Query: 4 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 516 ++++K+I+N RQVTF+KRR GL KKA ELSVLCDA+VALIIFS+ GKL+++ SSSSM + LER + + + + E L+L Y +L R + GEEL LN +EL+ LER L+ L ++ + ++ + +LQ K L E N+ L+Q++ME Sbjct: 5 KIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDY-SSSSMKQILERRDLHSKNLEKLDQPSLE-LQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVME 173
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.872e-26 Identity = 68/179 (37.99%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQ----EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGY 522 G++E+KRIEN NRQVTF+KRR GLLKKA EL+VLCDA V ++IFS+ GK++E+CS + L+ L E YQ V+ E++ Q E +++ E L R G++L L ++ LE+QL+ S+ ++R+ + Q + L L+ KE +L + N L + + E + Sbjct: 4 GKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQ---------TVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENH 173
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.171e-26 Identity = 66/173 (38.15%), Postives = 107/173 (61.85%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMLKTLERYQKCNYGAPE-PNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLM 513 G++E+KRIEN +RQVTF+KRR+GL+KK +ELSVLCDA++ LI+FS +GKL E+C+ SM + ++RY K PE N + A +E ++K LQ + + G++L + +EL LE+ LD SL ++R+ + + + + + L+ E +L + N+ + LM Sbjct: 4 GKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKENQEMYHWLM 176
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.531e-25 Identity = 70/175 (40.00%), Postives = 106/175 (60.57%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSML-KTLERYQKCN----YGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 510 G++E+KRIEN NRQVT++KRRNG++KKA E++VLCDA+V+LIIF N GK++E+CS S+ L L+ YQK + + A N+S E ++K + +Q R+L GE++ LN KEL LE L L I + ++ + L ++ +Q+L E +K L+ L Sbjct: 4 GKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLS----------NEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQS----EILRMVRKNDQILEEEHKQLQYAL 164
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.023e-25 Identity = 69/172 (40.12%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 4 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELS-SQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 516 R E+KRIE+ RQVTF+KRR GL KKA ELSVLCDA+VALI+FS+ GKL F +SSSM + +++Y N + + + +L+L+ +Y L + R + GEEL L+ EL+ LE+ L+ L ++ T+ Q ++ ++ELQ K L+E N L+ ++ + Sbjct: 5 RREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHF-ASSSMNEIIDKY---NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQ 172
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.027e-24 Identity = 73/199 (36.68%), Postives = 111/199 (55.78%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMLKTLERYQ----KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKP 582 G++E+KRIEN NRQVTF+KRR+G+LKKA E+SVLCDAEV ++IFS+ GKLY++CS +S+ + LE+YQ K + ++SA E ++K + +Q R+L GE+L L KEL +E LD + + ++D +++L + NK L +L + + L+ S D G P Sbjct: 4 GKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSA----------EIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLAFKLHQ----QDIALSGSMRDLELGYHP 184
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.289e-24 Identity = 66/185 (35.68%), Postives = 103/185 (55.68%), Query Frame = 1 Query: 4 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAE 558 R+ ++RI+N RQVTF+KRR GL KKA ELS+LCDAEV L++FS GKL++F +S+SM + ++RY + S + L+ +LK R + GEEL LN ++L+ LE+ L+ L + T+++ +LD + L+ K L E N LK++L ++ P + Sbjct: 24 RIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQF-ASTSMEQIIDRYNSHSKTLQRAEPSQLD-LQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRMEEMQPGPD 206
BLAST of CB290677 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.289e-24 Identity = 72/172 (41.86%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 1 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLS-EANKTLKQRL 510 G++E+KRIEN NRQVT++KRR G++KKA EL+VLCDA+VA+I+FS+ GK +EFCS S+ +K + +RYQ+ S + Q+ LK L+ R +GE+L L EL LE+ +D +LK++R R +++ T TE K+ S EA +TL+Q L Sbjct: 4 GKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQA------IGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRH-RKYHVITTQTETYKKKVKHSYEAYETLQQEL 168 The following BLAST results are available for this feature:
BLAST of CB290677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290677 ID=CB290677; Name=CB290677; organism=Citrus sinensis; type=EST; length=821bpback to top |