CB290678

Overview
NameCB290678
Unique NameCB290678
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290678 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.053e-58
Identity = 110/171 (64.33%), Postives = 126/171 (73.68%), Query Frame = -3
Query:  262 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIFGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 774
            M  P+VFFD+   G+  GRIVMEL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIPGFMCQ           G+SI+G KFADENF  KHT PGILSM NAG  TNGSQFF+CTA T WLDGKHVVFG V +G+D++K +E  GS SG+T+K + IADCGQL
Sbjct:    1 MAKPQVFFDLQANGENLGRIVMELRADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAVTQGLDIIKKVESYGSDSGKTSKKITIADCGQL 164          
BLAST of CB290678 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.064e-58
Identity = 106/167 (63.47%), Postives = 129/167 (77.25%), Query Frame = -3
Query:  262 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIFGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 762
            KVFFD+T+G   AGRIVMELF +VTP+TAENFRALCTGEKG+GK+GKPLH+KGS FHRVI  FM Q           GESI+G KFADENF  KH  PG+LSM NAGP TNGSQFF+      WLDGKHVVFG+VVEG+++++ +E  GS SG+T + +VI+DCG++
Sbjct:    4 KVFFDITIGSDTAGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVVEGLEILEQLEANGSQSGQTKQAIVISDCGEI 170          
BLAST of CB290678 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 4.425e-57
Identity = 106/167 (63.47%), Postives = 123/167 (73.65%), Query Frame = -3
Query:  262 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIFGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 762
            KV+FD+ + G+ AGR+V+ LF    P+TAENFRALCTGEKG+GKSGKPLHYKGS FHR+IP FM Q           GESI+G KFADENF  KHTGPG+LSM N+G  TNGSQFF+ T  T WLDG+HVVFG+VV+GMDVV  IE  G  SG     VVIAD G+L
Sbjct:   33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199          
BLAST of CB290678 vs. ExPASy Swiss-Prot
Match: PPIA_DROME (Peptidyl-prolyl cis-trans isomerase OS=Drosophila melanogaster GN=Cyp1 PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 9.857e-57
Identity = 111/174 (63.79%), Postives = 127/174 (72.99%), Query Frame = -3
Query:  262 SKMPN-PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIFGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 780
            SKM   P+VFFDMT   +P GRIVMEL +DV P+TAENFRALCTGEKG G       YKGS FHRVIP FMCQ           G+SI+G+KF DENF  KHTG GILSM NAG  TNGSQFF+CT KT WLD KHVVFG+VVEG+DVVK IE  GS SG+T+K +++A+ G L
Sbjct:   61 SKMSTLPRVFFDMTADNEPLGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGANTNGSQFFICTVKTAWLDNKHVVFGEVVEGLDVVKKIESYGSQSGKTSKKIIVANSGSL 227          
BLAST of CB290678 vs. ExPASy Swiss-Prot
Match: CYP5_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizopus oryzae GN=cyp5 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.681e-56
Identity = 103/168 (61.31%), Postives = 122/168 (72.62%), Query Frame = -3
Query:  262 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIFGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 765
            PKVFFD+ V G+P+GR+  +LF+D  P+TAENFRALCTGEKG G SGKPLHYKGS FHR+IPGFM Q           GESI+G KF DENF  KHTG G+LSM NAGP TNGSQFF+   KT WLDG H VFGQ+VEG  V++ +E+ G+ SG     V I DCG++
Sbjct:    7 PKVFFDVAVNGKPSGRLTFKLFSDTVPKTAENFRALCTGEKGTGVSGKPLHYKGSHFHRIIPGFMAQGGDFTMGNGRGGESIYGHKFNDENFTLKHTGKGVLSMANAGPNTNGSQFFITFDKTPWLDGNHTVFGQLVEGNQVLEILEQHGTQSGMPTAKVEIVDCGEI 174          
BLAST of CB290678 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.746e-56
Identity = 114/168 (67.86%), Postives = 129/168 (76.79%), Query Frame = -3
Query:  262 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIFGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 756
            FFDMT+GGQPAGRI+MELF DV P+TAENFRALCTGEKGIG SGK + Y+GS FHRVIP FM Q           GESI+G+KFADENF+ KHT PG+LSM NAGPGTNGSQFF+ T  T  LDGKHVVFG+VVEGMDVV+ IE   + + R +KP   V IA CGQL
Sbjct:    5 FFDMTIGGQPAGRIIMELFPDV-PKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVEGMDVVRKIE--ATQTDRGDKPLSEVKIAKCGQL 169          
BLAST of CB290678 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.090e-55
Identity = 106/167 (63.47%), Postives = 120/167 (71.86%), Query Frame = -3
Query:  262 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIFGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 762
            KV+FD+ + G+ AGRIVM LF    P+T ENFRALCTGEKGIGK+GK LHYKGSSFHR+IP FM Q           GESI+G KFADENF  KHTGPG LSM NAG  TNGSQFF+ T  T WLDG+HVVFG+VV GMDVV  +E  G+ SG     VVI D G+L
Sbjct:   36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGEL 202          
BLAST of CB290678 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.423e-55
Identity = 107/179 (59.78%), Postives = 127/179 (70.95%), Query Frame = -3
Query:  259 SPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIFGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 795
            S  +  K    +VFFD+T+GG+ AGRIV EL+ D+ P+TAENFRALCTGEKG+GK GKPLHYKGS+FHRVI  FM Q           GESI+G+KF DENF  KH  P +LSM NAGPGTNGSQFFV T  T  LDGKHVVFG+V+ G  VV+ IE + +   +  K  VIADCG+LS
Sbjct:    2 SSTDDVKQARSRVFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKTQGDKPTKDAVIADCGELS 180          
BLAST of CB290678 vs. ExPASy Swiss-Prot
Match: PPIF_BOVIN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Bos taurus GN=PPIF PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 7.064e-55
Identity = 105/165 (63.64%), Postives = 120/165 (72.73%), Query Frame = -3
Query:  292 NQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIFGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK 786
            + S   NP V+ D+   GQP GR+V+EL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIP FMCQ           G+SI+GS+F DENF  KH GPG+LSM NAGP TNGSQFF+CT KT+WLDGKHVVFG V EGMDVVK IE  GS SG+T+K
Sbjct:   40 SSSSSGNPLVYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFKLKHEGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSK 197          
BLAST of CB290678 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.574e-54
Identity = 107/171 (62.57%), Postives = 122/171 (71.35%), Query Frame = -3
Query:  262 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIFGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 774
            M NPKVFFD++   +P GRIVMEL ADV P+TAENFRALCTGEKG G       YKG SFHRVIP FM Q           G+SI+G+KF DENF  KHTGPG LSM NAGP TNGSQFF+ T K  WLDGKHVVFG+V EGMDVV+ IE +GS +G     ++I +CGQL
Sbjct:    1 MSNPKVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGEKGFG-------YKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVTEGMDVVQNIESLGSPNGTPRAKIIIDNCGQL 164          
The following BLAST results are available for this feature:
BLAST of CB290678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
PPIA_HEMPU1.053e-5864.33Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
PPI2_SYNY33.064e-5863.47Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
CP19D_ARATH4.425e-5763.47Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
PPIA_DROME9.857e-5763.79Peptidyl-prolyl cis-trans isomerase OS=Drosophila ... [more]
CYP5_RHIOR1.681e-5661.31Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizop... [more]
CYPX_USEUD3.746e-5667.86Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]
CP20A_ARATH1.090e-5563.47Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]
PPID_NEUCR1.423e-5559.7841 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
PPIF_BOVIN7.064e-5563.64Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA1_RHIOR1.574e-5462.57Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ch09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ch09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290678 ID=CB290678; Name=CB290678; organism=Citrus sinensis; type=EST; length=806bp
TTTTTTTTTTTTTTTTTAATATAACAAGACAAGCCCCCTTTTATTTAAAA
AGGGAGCTCATAGAAAGACATAAAAAACCCTTCATCAAGAACCACCACCG
GAGACCCGATCCAACCCGAACAAGTAACATAGCAGGAAAATTAGATAAAG
ATTAAAAGTCCTACAGACACGGCCACATAATAATAGATAGCGTAATCGCC
ATCACGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTATCATGAT
CAAATCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCTTGTTGGT
CCTTCCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACGTCCATTC
CTTCGACGACTTGACCGAACACAACGTGCTTCCCATCGAGCCACTCGGTC
TTGGCCGTACAGACGAAAAACTGAGATCCGTTGGTTCCGGGTCCGGCATT
CCCCATGGAGAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAGTTCTCAT
CGGCGAATTTTGAGCCGAAGATTGATTCGCCTCCGGTTCCGTTTCCGGGG
GTGAAGTCTCCCCCCTGGCACATGAATCCGGGGATCACACGGTGGAAGGA
CGAGCCCTTGTAGTGGAGTGGCTTGCCGGACTTGCCGATGCCTTTCTCGC
CGGTGCAAAGGGCGCGGAAGTTCTCGGCGGTTCGGGGGGTGACATCGGCG
AAGAGCTCCATCACGATCCTGCCGGCGGGCTGACCGCCGACGGTCATGTC
GAAGAACACTTTGGGGTTTGGCATTTTTGATTGGTTGATTGGAGAGAAAA
AAACAA
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