CB290679

Overview
NameCB290679
Unique NameCB290679
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290679 vs. ExPASy Swiss-Prot
Match: PPI1_STAAC (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain COL) GN=SACOL0957 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.082e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 2
Query:  110 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 547
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLTDGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CB290679 vs. ExPASy Swiss-Prot
Match: PPI1_STAAB (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0821 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.082e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 2
Query:  110 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 547
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CB290679 vs. ExPASy Swiss-Prot
Match: PPI1_STAA8 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00891 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.082e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 2
Query:  110 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 547
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CB290679 vs. ExPASy Swiss-Prot
Match: PPI1_STAA3 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0857 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.082e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 2
Query:  110 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 547
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CB290679 vs. ExPASy Swiss-Prot
Match: CYPR_YEAST (Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccharomyces cerevisiae GN=CPR4 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 51/145 (35.17%), Postives = 69/145 (47.59%), Query Frame = 2
Query:   77 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGI--GKSGKPLH---YKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK--TEWLDGKHVVFGQVVEGMD 490
            +FD          +  EL+  V P+T  NF  L  G K +  GK    +H   Y+ +  ++V P    Q             ++YG KF DENF  KH  P  L+MA  GP +N S+F + T     E LDGK VVFGQ+  G+D
Sbjct:   55 YFDPVSKSMKEADLTFELYGTVVPKTVNNFAMLAHGVKAVIEGKDPNDIHTYSYRKTKINKVYPNKYIQGGVVAPDVGPF--TVYGPKFDDENFYLKHDRPERLAMAYFGPDSNTSEFIITTKADGNEELDGKSVVFGQITSGLD 197          
BLAST of CB290679 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.968e-15
Identity = 65/178 (36.52%), Postives = 85/178 (47.75%), Query Frame = 2
Query:   29 VFFSPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE---NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMD--VVKAIEKVGSSSGRTNKPV 547
            V FS I     P+ K +  ++      G + +EL     P+T  NF  LC       K GK   Y  + FHR IPGFM Q             SI+ S F DE       KH   G+LSMAN G  TN SQFF+       LDGKH VFG++V+G     +  +E+V S  G T++P+
Sbjct:  280 VMFSHIKSR--PSSKAYVRLSTN---FGALNLELHCGKAPKTCFNFLQLC-------KHGK---YDDTLFHRNIPGFMIQGGDPTGTGRGG-SSIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDGDKDATLTKMEQVPSEQG-TDRPL 440          
BLAST of CB290679 vs. ExPASy Swiss-Prot
Match: PPIL3_USTMA (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ustilago maydis GN=CYP10 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.408e-14
Identity = 50/128 (39.06%), Postives = 64/128 (50.00%), Query Frame = 2
Query:  110 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMD 490
            G I +E+F D TPR AENF   C              Y    +HR I  FM Q            +SI+G  FADE     K    GI++ ANAGP TN SQFF+  AK   LDGK+ + G+V++G +
Sbjct:   10 GDIKVEVFCDATPRAAENFLGHCAAGT----------YNDVKWHRNIKSFMIQTGDPTGTGKGG-QSIWGKPFADEIRSSLKFDRRGIVACANAGPDTNKSQFFITYAKQPHLDGKYTIIGKVIDGAE 126          
BLAST of CB290679 vs. ExPASy Swiss-Prot
Match: SDC10_MOUSE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mus musculus GN=Sdccag10 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.591e-14
Identity = 51/143 (35.66%), Postives = 70/143 (48.95%), Query Frame = 2
Query:   50 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 475
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:    7 QEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CB290679 vs. ExPASy Swiss-Prot
Match: SDC10_RAT (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Rattus norvegicus GN=Sdccag10 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.915e-14
Identity = 50/143 (34.97%), Postives = 70/143 (48.95%), Query Frame = 2
Query:   50 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 475
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ES+YG+ F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:    7 QEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESVYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CB290679 vs. ExPASy Swiss-Prot
Match: PPIL2_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neurospora crassa GN=cyp-8 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.295e-13
Identity = 55/153 (35.95%), Postives = 73/153 (47.71%), Query Frame = 2
Query:  110 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMD-VVKAIEKVGS-SSGRTNKPVVIAD 559
            G + +EL  +  P+   NF  L   EKG        +Y+  +FHR I  FM Q             SI+G  F DE      H+  GI+SMAN G  TN SQFF+       LD KH +F +V+EG D  + A+E V +  S R    +VI D
Sbjct:  339 GPLTLELLPEFAPKAVWNFLRL--SEKG--------YYRDVAFHRSIRNFMIQGGDPSGTGRGG-SSIWGKNFEDEFEGPNTHSARGIVSMANKGKNTNSSQFFITYRPASHLDRKHTIFAKVIEGQDTTLTAMENVATDGSDRPLNKIVIKD 480          
The following BLAST results are available for this feature:
BLAST of CB290679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPI1_STAAC3.082e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAB3.082e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA83.082e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA33.082e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
CYPR_YEAST5.257e-1535.17Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccha... [more]
PPIL2_USTMA8.968e-1536.52Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]
PPIL3_USTMA3.408e-1439.06Peptidyl-prolyl cis-trans isomerase-like 3 OS=Usti... [more]
SDC10_MOUSE7.591e-1435.66Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mu... [more]
SDC10_RAT9.915e-1434.97Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ra... [more]
PPIL2_NEUCR1.295e-1335.95Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neur... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ch09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ch09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290679 ID=CB290679; Name=CB290679; organism=Citrus sinensis; type=EST; length=788bp
GCACGTGGCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACC
AATCAAAAATGCCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGT
CAGCCCGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCG
AACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCA
AGTCCGGCAAGCCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATC
CCCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGG
AGGCGAATCAATCTACGGCTCAAAATTCGCCGATGAGAACTTCGTGAAGA
AGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACC
AACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGG
GAAGCACGTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGG
CCATCGAGAAAGTGGGGTCCAGCTCCGGAAGGACCAACAAGCCCGTCGTG
ATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATAATGATCGCC
ATCATCACGAGCCGTCTGATCGCGATCGTGATGGTGATTATGTTATCTAT
TATTATGTGGCCGTGTCTGTAGGACTTTTAATCTTTATCTAATTTTCCTG
CTATGTTACTTGTTCGGGTTGGATCGGGTCTCCGGGGGTGGTTCTTGATG
AACTGTTTTTTATGTCTTTCTATGAGCTGCCTTTTTAA
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