CB290696

Overview
NameCB290696
Unique NameCB290696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290696 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.118e-26
Identity = 62/177 (35.03%), Postives = 106/177 (59.89%), Query Frame = -2
Query:  299 FREVCEEYAKEVEKLAYKLMELIALSLGLPP-DSFNGFFKDQTT--FVRLNHYPPCPAPH---LALGVGRHKDAGALTVLAQDDVGGLEVKRKSDGEWVRVKPTPDAYIINVGDIIQVWSNDAYESVEHRVMVNSEKERFSIPFFFFPSHYTMVKPLDELTNEQNPAKYRAYSWGKF 811
            FRE  EEY KE+++++YK++E++A  LG+ P D+ +   +D+ +   +RLNHYP         + +G G H D   ++VL  ++  GL++  K DG WV V P   ++ INVGD +QV +N  ++SV+HRV+ ++ + R S+ +F  P     + PL  L  EQ+   Y+ ++W ++
Sbjct:  137 FRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVK-DGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADTRRSRISMIYFGGPPLSQKIAPLPCLVPEQDDWLYKEFTWSQY 312          
BLAST of CB290696 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.198e-25
Identity = 61/181 (33.70%), Postives = 98/181 (54.14%), Query Frame = -2
Query:  299 FREVCEEYAKEVEKLAYKLMELIALSLGLPP-DSFNGFFKDQTT--FVRLNHYPPCPAPHL-------ALGVGRHKDAGALTVLAQDDVGGLEVKRKSDGEWVRVKPTPDAYIINVGDIIQVWSNDAYESVEHRVMVNSEKERFSIPFFFFPSHYTMVKPLDELTNEQNPAKYRAYSWGKF 811
            FR   EEY   V K+ + ++E I   LG+ P ++ +    DQ T   +RLNHYPPCP  +         +G G H D   ++VL  ++  GL++   +DG W+ V P   ++  NVGD +QV +N  ++SV HRV+ N +K R S+ +F  PS    + PL  L + ++   Y  ++W ++
Sbjct:  123 FRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNNTSGLQINL-NDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRVSMIYFAGPSLTQRIAPLTCLIDNEDERLYEEFTWSEY 302          
BLAST of CB290696 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.044e-25
Identity = 63/168 (37.50%), Postives = 100/168 (59.52%), Query Frame = -2
Query:  323 EFREVCEEYAKEVEKLAYKLMELIALSLGLPPDSFN---GFFKDQTTFVRLNHYPPCPAPHLALGVGRHKDAGALTVLAQDDVGGLEVKRKSDGEWVRVKPTPDAYIINVGDIIQVWSNDAYESVEHRVMVNSEKERFSIPFFFFPSHYTMV-KPLDELTNEQNPAKY 814
            ++ E   EYAK +  LA K+ + +++ LGL PD      G  ++    +++N+YP CP P LALGV  H D  ALT +  + V GL++    +G+WV  K  PD+ ++++GD +++ SN  Y+S+ HR +VN EK R S   F  P    +V KPL E+ + ++PAK+
Sbjct:  164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY--EGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKF 329          
BLAST of CB290696 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.044e-25
Identity = 56/149 (37.58%), Postives = 88/149 (59.06%), Query Frame = -2
Query:  359 EVCEEYAKEVEKLAYKLMELIALSLGLPPDSFNGFFKDQTTFVRLNHYPPCPAPHLALGVGRHKDAGALTVLAQDDVGGLEVKRKSDGEWVRVKPTPDAYIINVGDIIQVWSNDAYESVEHRVMVNSEKERFSIPFFFFPSHYTMVKPL 805
            +V EEY++++  LA KL+E+++ ++GL  +S      D    + +N+YP CP P L LG+ RH D G +T+L QD VGGL+  R     W+ V+P   A+++N+GD     SN  +++ +H+ +VNS   R SI  F  P+    V PL
Sbjct:  154 KVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPL 302          
BLAST of CB290696 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25
Identity = 65/174 (37.36%), Postives = 94/174 (54.02%), Query Frame = -2
Query:  296 FREVCEEYAKEVEKLAYKLMELIALSLGLPPDSFN--GFFKDQTTFVRLNHYPPCPAPHLALGVGRHKDAGALTVLAQDDVGGLEVKRKSDGEWVRVKPTPDAYIINVGDIIQVWSNDAYESVEHRVMVNSEKERFSIPFFFFPSHYTMVKPLDELTNEQNPAKYRAYSWGKFL 811
            +RE  EEYAK + K+A  +   ++L LGL           +D    +++N+YPPCP P LALGV  H D   +T+L  +     EV+   DG W  V   P+A I+++GD +++ SN  Y+SV HR  VN  K R S P F  PS    V P+  L NE NP K++   +  ++
Sbjct:  172 YREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVPN-----EVQVFKDGHWYDVNYIPNAIIVHIGDQVEILSNGKYKSVYHRTTVNKYKTRMSWPVFLEPSSEHEVGPIPNLINEANPPKFKTKKYKDYV 340          
BLAST of CB290696 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25
Identity = 56/149 (37.58%), Postives = 88/149 (59.06%), Query Frame = -2
Query:  359 EVCEEYAKEVEKLAYKLMELIALSLGLPPDSFNGFFKDQTTFVRLNHYPPCPAPHLALGVGRHKDAGALTVLAQDDVGGLEVKRKSDGEWVRVKPTPDAYIINVGDIIQVWSNDAYESVEHRVMVNSEKERFSIPFFFFPSHYTMVKPL 805
            +V EEY++ +  LA KL+E+++ ++GL  +S      D    + +N+YP CP P L LG+ RH D G +T+L QD VGGL+  R +   W+ V+P   A+++N+GD     SN  +++ +H+ +VNS   R SI  F  P+    V PL
Sbjct:  155 KVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATVYPL 303          
BLAST of CB290696 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25
Identity = 69/181 (38.12%), Postives = 102/181 (56.35%), Query Frame = -2
Query:  296 EFREVCEEYAKEVEKLAYKLMELIALSLGLPPD----SFNGFFKDQTTF-VRLNHYPPCPAPHLALGVGRHKDAGALTVLAQDD-VGGLEVKRKSDGEWVRVKPTPDAYIINVGDIIQVWSNDAYESVEHRVMVNSEKERFSIPFFFFPSHYTMVKPLDELTNEQ--NPAKYRAYSWGKFL 814
            +F E  +EY +E+ KLA K+ME++  +LG        +F+G  +    F  +++HYPPCP   L  G+  H DAG + +L QDD VGGL++ +  DG W+ V+P  DA +IN GD I+V SN  Y+S  HRV+  S   R SI  F+ PS    + P      E+   PA Y  + +G ++
Sbjct:  107 DFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLK--DGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSIASFYNPSLKATIAPAAGAATEEAAPPALYPKFLFGDYM 285          
BLAST of CB290696 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.486e-25
Identity = 64/192 (33.33%), Postives = 101/192 (52.60%), Query Frame = -2
Query:  272 EFREVCEE----YAKEVEKLAYKLMELIALSLGLPPDSFNGFFKDQTTFVRLNHYPPCPAPHLALGVGRHKDAGALTVLAQDDVGGLEVKRKSDGEWVRVKPTPDAYIINVGDIIQVWSNDAYESVEHRVMVNSEKERFSIPFFFFPSHYT-------MVKPLDELTNEQNPAKYRAYSWGKFLTTRKGSNF 814
            EF +VC +    Y+  V  L   L EL++ +LGL P+        +   +  ++YP CP P L  G  +H D+G LT+L QD +GGL++    + +W+ V   P A +IN+ D++Q+ +ND ++SVEHRV+ N    R S+   F     T       +  P+ EL +E+NP  Y+  +   F+T R    F
Sbjct:  199 EFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQI--LLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDFITIRFAKRF 388          
BLAST of CB290696 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.553e-25
Identity = 66/188 (35.11%), Postives = 106/188 (56.38%), Query Frame = -2
Query:  269 EFREVCEEYAKEVEKLAYKLMELIALSLGLPPDSFNGFF---KDQTTFVRLNHYPPCPAPHLALGVGRHKDAGALTVLAQDD-VGGLEVKRKSDGEWVRVKPTPDAYIINVGDIIQVWSNDAYESVEHRVMVNSEKERFSIPFFFFPSHYTMVKPLDELTNE--QNPAKYRAYSWGKFLTTRKGSNFK 814
            E+R+  +E+A E+EKLA KL++L+  +LGL        F   K      ++++YPPCP P L  G+  H DAG + +L QDD V GL++ +  DGEWV V P   + +IN+GD I+V +N  Y+SV HRV+  S+  R SI  F+ P + + + P   +  +  ++   Y  + +  ++    G  F+
Sbjct:  109 EYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLK--DGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIAQSDGTRMSIASFYNPGNDSFISPAPAVLEKKTEDAPTYPKFVFDDYMKLYSGLKFQ 294          
BLAST of CB290696 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.947e-25
Identity = 62/193 (32.12%), Postives = 105/193 (54.40%), Query Frame = -2
Query:  266 EFREVCEEYAKEVEKLAYKLMELIALSLGLPPDSFNGFFKDQT--------TFVRLNHYPPCPAPHLALGVGRHKDAGALTVLAQDDVGGLEVK--RKSDGEWVRVKPTPDAYIINVGDIIQVWSNDAYESVEHRVMVNSEKERFSIPFFFFPSHYTMVKPLDELTNEQNPAKYRAYSWGKFLTTRKGSNFKK 814
            EF  V EEY K ++ L+++L+ ++  SLGL  +       D+T        +F++LN YP CP PHLA+G+  H D+  LT+L Q ++ GLE++  ++    W+ V+P   + ++ +GD+  + SN  + S  HR +VN    R S  +F  P     + PL   +++ +P  YR   W ++L   K ++F K
Sbjct:  153 EFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVNKTHHRVSAAYFAGPPKNLQIGPL--TSDKNHPPIYRRLIWEEYLAA-KATHFNK 342          
The following BLAST results are available for this feature:
BLAST of CB290696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
G2OX2_ARATH4.118e-2635.03Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G2OX1_ARATH1.198e-2533.70Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
LDOX_ARATH2.044e-2537.50Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
FL3H_MATIN2.044e-2537.58Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FLS_SOLTU2.669e-2537.36Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FL3H_ARATH2.669e-2537.58Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
ACCO_MUSAC2.669e-2538.121-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
DV4H_CATRO3.486e-2533.33Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCO1_MALDO4.553e-2535.111-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
G3OX3_ARATH5.947e-2532.12Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01da07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01da07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290696 ID=CB290696; Name=CB290696; organism=Citrus sinensis; type=EST; length=815bp
TTTTTTTTTTTTTTTTTCAGAAAACATATTTTATTAATGTGCCATTTTGA
CTCCAACTAGCAGATGACATTATTGCAAATCCCCTTATTCCATCACATAA
TATATTCACATATAGGAAGAATTCGAAGATGATACACACTCCATGTATAT
GTGTGTGAATTTATAATTAAATTAATTACTTGCTGTTTATAGAGAGTGCT
CTTTCCAGCTTATCGGCTAACTCTTGTACCCTGAAGTGATAAATTTGAAC
GTTCTCAACATCAAGTTTCTTGAAATTACTGCCTTTTCGAGTAGTTAAAA
ATTTCCCCCAACTGTATGCTCTGTATTTAGCAGGATTCTGCTCGTTTGTA
AGCTCATCCAATGGCTTCACCATTGTGTAATGAGATGGGAAGAAAAAAAA
TGGAATTGAAAACCTTTCCTTCTCAGAATTCACCATAACCCTATGCTCCA
CACTCTCATAAGCATCATTGCTCCATACCTGAATAATGTCACCAACATTT
ATGATATAAGCATCCGGGGTGGGTTTGACGCGAACCCACTCCCCGTCTGA
TTTTCTCTTCACCTCAAGACCTCCGACATCATCTTGAGCAAGGACGGTAA
GGGCGCCGGCGTCCTTGTGTCTGCCGACGCCGAGGGCGAGGTGGGGAGCT
GGGCACGGTGGGTAGTGATTAAGTCTAACAAAGGTGGTTTGATCTTTGAA
AAAGCCATTGAAGCTGTCTGGTGGGAGTCCCAGGCTCAGGGCTATAAGTT
CCATCAACTTGTATGCAAGTTTTTCCACTTCTTTAGCATACTCTTCACAT
ACCTCTCTGAATTCA
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