CB290698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290698 vs. ExPASy Swiss-Prot
Match: RL17_ASPFU (60S ribosomal protein L17 OS=Aspergillus fumigatus GN=rpl17 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.805e-42 Identity = 86/151 (56.95%), Postives = 109/151 (72.19%), Query Frame = -3 Query: 308 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 760 V+Y+ + KS +ARGS LRV FKNTRE A A+ + L +A +LE+V + +PF R+ +GRTAQ K + + RWPVKSA+F+LDLLKNAE+NA+ KGLD L + HIQVNQA K RRRTYRAHGRINPYM++PCHIEL L+ Sbjct: 9 VRYAAQDIPAAKSARARGSYLRVSFKNTRETAQAINGMKLQRALAFLENVKNKTEVVPFRRYAGSIGRTAQGKQWGVS-KARWPVKSAQFLLDLLKNAEANADTKGLDTGNLIVKHIQVNQAPKGRRRTYRAHGRINPYMTNPCHIELILT 158
BLAST of CB290698 vs. ExPASy Swiss-Prot
Match: RL22_METBU (50S ribosomal protein L22P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl22p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.996e-21 Identity = 59/151 (39.07%), Postives = 89/151 (58.94%), Query Frame = -3 Query: 308 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 760 +KY+ E D T S KA GS+L + K +RE A++ + A++YLEDV+ KQA+PF R +G + P GR+PVK A +L LLKNAESNAE KGL+ + ++I+H +N+ + RA GR +P + ++E+ +S Sbjct: 4 IKYTTELDAET-SAKAMGSELHISPKKSRELCKAIKGMRTNAARQYLEDVVILKQAVPFGRHNDSLGH-----RKGPMAAGRYPVKVASEMLKLLKNAESNAEYKGLNPEHMFIAHTAMNRGRVIHGMRPRARGRASPENTETVNLEMIIS 148
BLAST of CB290698 vs. ExPASy Swiss-Prot
Match: RL22_METMA (50S ribosomal protein L22P OS=Methanosarcina mazei GN=rpl22p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.110e-21 Identity = 58/151 (38.41%), Postives = 87/151 (57.62%), Query Frame = -3 Query: 308 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 760 + YS D P + KA GS+L + K +RE ++ + ++A+++LEDV+A KQA+PF R G G + P GR+PV ++K IL +LKNAESNAE KGL+ +YI H + + + RA GR +P + +IE+ LS Sbjct: 4 INYSINAD-PENTSKAMGSELHISPKKSREVCCKIKGMKASEARKFLEDVIAMKQAVPFKRHSEGAGH-----RKGPMAGGRYPVSASKEILKVLKNAESNAEYKGLEPANMYIIHAAIQRGRVIHGFMPRARGRASPKDTETVNIEMILS 148
BLAST of CB290698 vs. ExPASy Swiss-Prot
Match: RL22_METBF (50S ribosomal protein L22P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl22p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.110e-21 Identity = 59/151 (39.07%), Postives = 89/151 (58.94%), Query Frame = -3 Query: 308 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 760 + YS + D T S KA GS+L + K +RE ++ + + +A+++LEDV+A KQA+PF R G G + P GR+PV ++K IL +L+NAESNAE KGL+ +YI+H + + + R RA GR P + +IE+ LS Sbjct: 4 INYSVKEDPETTS-KAMGSELHISPKKSREVCCKIKGMKVPEARKFLEDVIALKQAVPFKRHHDGSGH-----RKGPMAAGRYPVSASKEILKILRNAESNAEYKGLEPANMYITHAAIQRGRVIRGFMPRARGRATPKDTETVNIEMILS 148
BLAST of CB290698 vs. ExPASy Swiss-Prot
Match: RL22_METS3 (50S ribosomal protein L22P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl22p PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.673e-21 Identity = 57/148 (38.51%), Postives = 89/148 (60.14%), Query Frame = -3 Query: 311 YSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 754 Y+KE N K+ +A L++ K+ E +A+R + +TKAK YLEDV+ K+++PF R R VG K + GR+PVK+A+ +L +L+NAE+NAE KG+D + L+I HI ++ RA GR+ P+ + HI++ L Sbjct: 7 YNKET-NEAKTARAMAKSLKISPKHCVEICNAIRGMEVTKAKNYLEDVIDMKKSVPFKRHNRQVG---HRKGQEGWAAGRYPVKAAEQVLKVLENAEANAEYKGMDTENLFIEHISSHRGVVLPGVIPRAFGRMTPFNTPTTHIQIVL 150
BLAST of CB290698 vs. ExPASy Swiss-Prot
Match: RL22_ARCFU (50S ribosomal protein L22P OS=Archaeoglobus fulgidus GN=rpl22p PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.312e-20 Identity = 56/148 (37.84%), Postives = 85/148 (57.43%), Query Frame = -3 Query: 317 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 760 V Y+ +P++ TK+ KA G ++ + FK+ E A+R + +A++ LEDV+ K+AIPF R + V A + GR+P K+AK++L +L+N E+NAE KGLDV+ L I H Q + + R RA GR P +EL Sbjct: 6 VNYAYKPEDETKAAKAMGYEMPISFKHAVEICRAIRGKKIEEARKLLEDVVEMKRAIPFKRHKKKV---AHRRGLEKWYAGRYPQKAAKYVLKVLRNLEANAEYKGLDVENLVIVHAQAQKGRVIERYMPRAFGRATPRFQQLTTVEL 150
BLAST of CB290698 vs. ExPASy Swiss-Prot
Match: RL22_METAC (50S ribosomal protein L22P OS=Methanosarcina acetivorans GN=rpl22p PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.804e-19 Identity = 56/151 (37.09%), Postives = 86/151 (56.95%), Query Frame = -3 Query: 308 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 760 + YS D T S KA GS+L + K +RE ++ + ++A+++LEDV+A KQA+PF + G G + P G++P+ ++K IL +LKNAESNAE KGL+ +YI H + + + RA GR P + +IE+ LS Sbjct: 4 INYSINGDPETTS-KAMGSELHISPKKSREVCCKIKGMKASEARKFLEDVIAMKQAVPFKKHHDGSGH-----RKGPMAAGKYPISASKEILKVLKNAESNAEYKGLEPANMYIIHAAIQRGRVIHGFMPRARGRATPKDTETVNIEMILS 148
BLAST of CB290698 vs. ExPASy Swiss-Prot
Match: RL22_PYRKO (50S ribosomal protein L22P OS=Pyrococcus kodakaraensis GN=rpl22p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.662e-19 Identity = 57/148 (38.51%), Postives = 80/148 (54.05%), Query Frame = -3 Query: 311 YSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 754 YS + +P + +A G DLR+ K++ E +R + L A RYL+DV+A K+ +P RF G K G GR+PVK AK + +L NA++NAE KGLDVD L I H ++ R RA GR P+ HIE+ + Sbjct: 8 YSFQNFDPERMARASGRDLRISPKHSVELLREIRGMMLNDALRYLDDVIAKKRPVPMKRFNDSQGH----KPGKGFGPGRYPVKVAKAVKKILLNAKNNAEQKGLDVDRLKIIHAAAHRGPVLRGYIPRAFGRATPFNEQTTHIEIVV 151
BLAST of CB290698 vs. ExPASy Swiss-Prot
Match: RL22_IGNH4 (50S ribosomal protein L22P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl22p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.662e-19 Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = -3 Query: 317 NPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 736 NP K+ KA D + K E A +R + LT+AK YLE V+ ++ +P+ R+ V +++ GR+PVK+AK+ L LLKN E+NAE KGL+V+ L I HI ++ +R RA GR P H+E+ Sbjct: 14 NPEKTAKAMMWDAPISPKEATELARVIRGMKLTEAKAYLERVIKMEEPVPYRRYHGKVAHKRGLADKHGIPMGRYPVKAAKYFLKLLKNVEANAEFKGLEVEKLKIVHIASHKGMTIKRWMPRAFGRATPEFERRTHLEV 153
BLAST of CB290698 vs. ExPASy Swiss-Prot
Match: RL22_METST (50S ribosomal protein L22P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl22p PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.782e-19 Identity = 57/148 (38.51%), Postives = 83/148 (56.08%), Query Frame = -3 Query: 311 YSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 754 YS +P K KA G L++ K++ E +R + L AK +LEDV+A K +PF R + VG + K GR+PVK+A IL +L+NAE+NAE + LDV+ L + H+ N+ R T RA GR +P + HI++ L Sbjct: 7 YSYQPKADEKIAKAAGHSLKISPKHSVEICRTIRNMYLEDAKAFLEDVIAKKTVVPFKRHNKKVGHRSDLKGWP---SGRYPVKAAAAILKVLENAEANAENEELDVENLKLVHVCANRGVIIRGWTPRAFGRASPSNTPTTHIQIVL 151 The following BLAST results are available for this feature:
BLAST of CB290698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290698 ID=CB290698; Name=CB290698; organism=Citrus sinensis; type=EST; length=807bpback to top |