CB290699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METJA (50S ribosomal protein L22P OS=Methanocaldococcus jannaschii GN=rpl22p PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.960e-19 Identity = 52/142 (36.62%), Postives = 83/142 (58.45%), Query Frame = 3 Query: 66 NPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 NP K+ +A G ++ + K+ RE ++ + L +A ++LEDV+A ++ + F R C+ VG K + GR+PVK+AK IL +L++A++NAE KGL+ + L I HI N+ +R RA GR P HI++ L Sbjct: 14 NPEKTARAMGRNIPISRKHAREICKSINGMKLDEAIKFLEDVIAMRRPVLFRRHCKKVGHR---KGKLGWPAGRYPVKAAKAILKILQHAKANAEYKGLNTEKLRIKHISTNKGITIKRYMPRAFGRATPKFQETVHIQVIL 152
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METTH (50S ribosomal protein L22P OS=Methanobacterium thermoautotrophicum GN=rpl22p PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.328e-18 Identity = 53/150 (35.33%), Postives = 87/150 (58.00%), Query Frame = 3 Query: 42 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 VKY+ + ++ + + +A + L++ K+ E +R + L KAK+YLE+V+ ++ + F R+ R VG + N GR+PVK+A IL +L+NAE+NAE KGLD + L I HI ++ R RA GR P+ + H+++ L Sbjct: 4 VKYAYKEEDRSGTARASATHLKISPKHAVEICREIRGMELEKAKKYLEEVIRMERPVAFKRYNRKVGHR---RGLNGWASGRYPVKAAGQILKVLENAEANAEYKGLDTEKLRIIHISSHRGPVIRGWIPRAFGRATPFNTPTTHVQIVL 150
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_THEVO (50S ribosomal protein L22P OS=Thermoplasma volcanium GN=rpl22p PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.607e-18 Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 3 Query: 39 MVKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 494 M YS D + +AR + + K+ AH +R + L AK+ LEDV++ K AIP+ R+ V +R G GR+PVK+AK +DLL N E+NAE KG++ D+L I H+ N+ + ++ T +A+GR ++E+ ++ Sbjct: 1 MKGYSMSVDE--NNARARIVEADISLKDAVNIAHHIRGMKLDYAKQILEDVVSKKYAIPYFRYLDSVS------HRPGKGPGRYPVKAAKVFIDLLSNVENNAEFKGMNTDSLIIKHVAANKGRMIKKYTPKAYGRAGANFKDLINLEVIVT 144
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_PYRHO (50S ribosomal protein L22P OS=Pyrococcus horikoshii GN=rpl22p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.468e-17 Identity = 57/148 (38.51%), Postives = 78/148 (52.70%), Query Frame = 3 Query: 48 YSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 YS + +P + +A G DLR+ K E LR + L A RYL++V+A K+ +P R+ G K G GR+PVK AK I +L NA++NAE KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 7 YSFQNFDPERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDEVIALKRPVPLRRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNAKNNAEQKGLDPDKLKIIHIAAHRGPVLRGWYPRAFGRATPFNEQTTHIEVVV 150
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METKA (50S ribosomal protein L22P OS=Methanopyrus kandleri GN=rpl22p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.468e-17 Identity = 56/150 (37.33%), Postives = 86/150 (57.33%), Query Frame = 3 Query: 48 YSKEPD--NPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 YS P+ + ++ KA +LR+ K+ RE A+R + L +AK +L V+ ++A+PF + + V Q R GR+P K+A+ IL +L++AE+NAE KGLD D LYI HI ++ + R RA GR P+ + HIE+ L Sbjct: 9 YSIPPEELDDERTAKAFIRELRISPKHAREICRAIRGMPLDRAKEFLRRVIRKEEAVPFRKHKKKVPHRRQI--RPGWDAGRFPEKAAREILRVLEHAEANAEYKGLDTDRLYIKHIAAHKGRVIRGWIPRAFGRATPFNTPTTHIEVIL 156
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_STAMF (50S ribosomal protein L22P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl22p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.917e-17 Identity = 56/150 (37.33%), Postives = 88/150 (58.67%), Query Frame = 3 Query: 48 YSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVG--RTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 YS + + ++ KA D+ V K+ REA A+R +++AK+ LE+V+A ++ IPF R+ + R AK + P G R+PVK+AK++L LL++ E+NA+ KGLD D L I HI ++ +R RA GR P H+E+ + Sbjct: 6 YSYKLRDESRIAKAVQFDIPVSIKDMREAVAAIRGKKVSEAKKLLENVIALREPIPFKRYKGKLSHKRGLPAKWKWPIG--RYPVKAAKYLLRLLEHVEANADNKGLDKDKLVIVHIAAHKGMTLKRWMPRAFGRATPKFRRTSHVEIVV 153
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_THEPD (50S ribosomal protein L22P OS=Thermofilum pendens (strain Hrk 5) GN=rpl22p PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.271e-17 Identity = 52/147 (35.37%), Postives = 81/147 (55.10%), Query Frame = 3 Query: 45 KYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 485 +YS E + P ++ KA D+ + +K T E ++ S+ +A+R L ++ K+++P R+ + VG + G GR+PVK AK +L LL N E+NAE KGL+V+ L I H ++ K R RA GR PY H+E+ Sbjct: 5 RYSVELE-PERTAKASLRDVSMSYKLTVETLRLIKGKSIEEARRILTEIAEMKRSVPLKRYNKKVGHRSDVP-----GPGRYPVKVAKNLLKLLDNLENNAEFKGLNVENLRIVHAAAHKGMKIRNYLPRAFGRATPYYDQLVHVEI 145
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_PYRAB (50S ribosomal protein L22P OS=Pyrococcus abyssi GN=rpl22p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.271e-17 Identity = 56/148 (37.84%), Postives = 78/148 (52.70%), Query Frame = 3 Query: 48 YSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 YS + +P + +A G DLR+ K E LR + L A RYL+DV+A ++ +P R+ G K G GR+PVK AK I +L NA++NA+ KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 7 YSFQNFDPERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALRRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNAQNNAKQKGLDPDKLRIIHIAAHRGPVLRGWYPRAFGRPTPFNEQTTHIEVVV 150
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_PYRFU (50S ribosomal protein L22P OS=Pyrococcus furiosus GN=rpl22p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.723e-16 Identity = 55/148 (37.16%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 48 YSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 YS + +P + +A DLR+ K E LR + L A RYL+DV+A K+ +P R+ G K G GR+PVK AK I +L N ++NA KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 7 YSFQNFDPKRMARASARDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALKRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNVKNNAVQKGLDPDKLKIIHIAAHKGPVLRGWYPRAFGRATPFNEQTTHIEVVV 150
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METMJ (50S ribosomal protein L22P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl22p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.723e-16 Identity = 52/137 (37.96%), Postives = 79/137 (57.66%), Query Frame = 3 Query: 84 KARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 494 +A+ ++L V K++ E A ++ ++ T+AK YL DV+A K+AIPF RF R V A + + GR+PVK+A+ + LL++ E NAE GLDV+ L I H N + R RA GR P +IE+ ++ Sbjct: 17 RAKANELPVSPKHSIEIARFIKNMTTTEAKAYLTDVVALKKAIPFKRFNRNV---AHKRGLSKWPAGRYPVKAAEAYIRLLESVEKNAEYIGLDVENLRIDHAAANTGRGLRAFFPRAMGRATPKRRETVNIEIVVT 150 The following BLAST results are available for this feature:
BLAST of CB290699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290699 ID=CB290699; Name=CB290699; organism=Citrus sinensis; type=EST; length=785bpback to top |