CB290699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_HYPBU (50S ribosomal protein L22P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl22p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.168e-16 Identity = 54/142 (38.03%), Postives = 79/142 (55.63%), Query Frame = 3 Query: 75 KSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFC--RGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 494 KS KA D + +K E A L+ + + +A+R+LE V ++ IP R+ + R AK + P G R+PVK+AK +L LL N +NAEVKGLD + L I HI V++ + +R RA GR P HIE+ ++ Sbjct: 14 KSAKAMVWDAPISYKKIVELARLLKGMKVDEARRFLERVARGEEPIPVRRYSGKQAHHRGLAAKYKWPIG--RYPVKAAKILLRLLDNVTNNAEVKGLDTERLRIVHIAVHKGRVLKRWMPRAFGRATPKFKKYSHIEIVVA 153
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_META3 (50S ribosomal protein L22P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl22p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.052e-15 Identity = 52/150 (34.67%), Postives = 78/150 (52.00%), Query Frame = 3 Query: 42 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 + Y E D P K+ +A G LR+ K+T E + + L KA YL V+ KQ +PF R + V K + GR+P K++ IL +L+NA+ NAE KG++ + L I HI N+ +R RA GR +P H+++ L Sbjct: 4 LNYKVETD-PNKTARAMGRSLRISRKHTIEICREISGMKLDKAIAYLNRVIELKQVVPFKRHGKDV---PHKKGKYGWTAGRFPQKASTQILSVLENAKKNAEYKGMNTEKLRIKHISSNKGFTIKRHMPRAFGRASPKNQETVHVQVIL 149
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_HALWD (50S ribosomal protein L22P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl22p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.795e-15 Identity = 43/150 (28.67%), Postives = 86/150 (57.33%), Query Frame = 3 Query: 42 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 + YS + D P + + D + K+++ A ++ +++ A+ YL+DV+A +Q++PF + GVG + + GR+P K++K L+L++N SNA +G D +A+ I H+ ++ +++ R RA G +P+ ++ C +EL + Sbjct: 3 INYSVKAD-PETTARGMLRDRPISLKHSKAIAREIKGMTIADAESYLDDVIAQRQSVPFRQHNSGVGHRSDIDGWDA---GRYPEKASKAFLELIENVASNANEQGFDGNAMAIRHVAAHKVGERQGRKPRAFGSADPWNTTICDVELII 148
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_SULAC (50S ribosomal protein L22P OS=Sulfolobus acidocaldarius GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.061e-15 Identity = 46/139 (33.09%), Postives = 73/139 (52.52%), Query Frame = 3 Query: 75 KSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 K KA ++ ++ A+R ++L +A+ +L +V+ K+A+PF R+ G + + GR+P K+ K++L LL NAE+NA KGLD+D L I HI ++ +R RA GR HIE+ L Sbjct: 15 KLAKAVIKNIDASVRDLYNVCKAIRGMNLKEAREFLNNVLEEKEALPFWRYSHGTSHRSNISRKWKVKSGRYPKKAIKYVLKLLDNAENNANSKGLDIDNLKIVHIAAHKGLVLKRYMTRAFGRSTRKYKYLSHIEVIL 153
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_CENSY (50S ribosomal protein L22P OS=Cenarchaeum symbiosum GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.998e-15 Identity = 54/148 (36.49%), Postives = 83/148 (56.08%), Query Frame = 3 Query: 48 YSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNG--QGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 485 YS E +PT+ +A + ++ K+ RE + +R +++ KA+ +L+ V+ K+A+PF RF R VG +R+ G GR+P KSA + LL N ESNAE KG+D+D L I ++ +R RA GR P + H+EL Sbjct: 6 YSFEGYDPTRHVRASLREKQISHKHAREISLHIRGMTVEKARDFLQAVIEKKRAVPFRRFKRQVG------HRSDPGVMAGRYPEKSAAEFIKLLDNLESNAEYKGMDLDRLTIVGAVAHKGILIKRFIPRAMGRSTPKNNVLTHVEL 147
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_THEAC (50S ribosomal protein L22P OS=Thermoplasma acidophilum GN=rpl22p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15 Identity = 51/152 (33.55%), Postives = 81/152 (53.29%), Query Frame = 3 Query: 39 MVKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 494 M YS E + KAR + + K++ AH LR + L++AK ++ V+ AIP+ R+ V +R G GR+PVK+AK LL+N E+NAE KGL+ D L I HI N+ + ++ T +A+GR ++E+ ++ Sbjct: 4 MKGYSMEIEG--NHAKARIREADISLKDSVNIAHHLRGMPLSRAKEIIDAVINKTYAIPYFRYLDSVS------HRPGVGPGRYPVKAAKAFKQLLENVENNAEFKGLNTDNLVIKHIAANKGRMIKKYTPKAYGRAGANFKDLINLEIIVT 147
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_HALMA (50S ribosomal protein L22P OS=Haloarcula marismortui GN=rpl22p PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.519e-14 Identity = 49/150 (32.67%), Postives = 83/150 (55.33%), Query Frame = 3 Query: 42 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 + YS E D P + KA + ++ FK+++ A ++ + +A YLE V+ Q +PF + GVG ++ + GR+P K++K LDLL+NA NA+ +G D +A+ I H+ ++ +Q+ R RA GR + + S +EL L Sbjct: 3 ISYSVEAD-PDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDA---GRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELIL 148
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_CALMQ (50S ribosomal protein L22P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl22p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.384e-14 Identity = 50/137 (36.50%), Postives = 72/137 (52.55%), Query Frame = 3 Query: 84 KARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNP-NGQ--GRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 485 KARG + R+ +K E A A+R L++ +A+ Y+E V K IP F R QA + P +G +WPVK A L +L+N ESNA +GL++D I H ++ + R RA GR P+ +IEL Sbjct: 30 KARGFEFRISWKKAIETARAIRFLTIKQAEDYMEKVKDLKAPIPIKEFTR-----KQAHHNVPWDGWPVAKWPVKVADSFLQVLRNLESNASYRGLNIDNTVIVHASASRGMRIRNYMPRALGRATPWFQDTVNIEL 161
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_UNCMA (50S ribosomal protein L22P OS=Uncultured methanogenic archaeon RC-I GN=rpl22p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.773e-14 Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 3 Query: 42 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNG--QGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 V Y+ E D P + KA ++ V K+ +E +R + L+ AK YL+DV+ K+++PF + R VG R+ +G GR+PVK++ IL LLK+AE+NAE KGL+ + + I H + + + RA GR + +E+ + Sbjct: 4 VGYTAEFD-PATTAKAMAYEINVSPKHCQEICRQIRGMKLSAAKTYLQDVIDKKRSVPFKQHARNVGH-----KRHQSGWPSGRYPVKASTEILKLLKHAEANAEYKGLETENMRIIHSTSKKGRVIQGIMPRAMGRATAWNIELVTVEVVI 149
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_PYRCJ (50S ribosomal protein L22P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl22p PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.540e-14 Identity = 48/139 (34.53%), Postives = 73/139 (52.52%), Query Frame = 3 Query: 69 PTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 485 P + KA + R+ +K + E A ++ ++L +AK +LEDV+ K+ IP F + A P +WPVK AK L LL+N E+NA+ KGLDV+ L I H ++ K RA GR P+ ++E+ Sbjct: 27 PEQIAKAYAPEQRMSWKKSVEVARFIKGMTLKQAKAWLEDVVKLKRPIPIKTFKKKQAHHATPWEGWP--VAKWPVKVAKRYLQLLENLENNAKFKGLDVERLVIIHAAAHKGIKIPNIMPRAFGRATPFNEETVNVEI 163 The following BLAST results are available for this feature:
BLAST of CB290699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290699 ID=CB290699; Name=CB290699; organism=Citrus sinensis; type=EST; length=785bpback to top |