CB290699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METTP (50S ribosomal protein L22P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl22p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.847e-14 Identity = 50/151 (33.11%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 42 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 494 + YS P+ + +A G +L + K+ RE A+R + + A+R+L+DV+A K+A+PF R+ R V GR+P K+A+ +L +L+NA NAE KGL+ + L I + + + R RA GR P IE+ L+ Sbjct: 4 LNYSITPEG--RFARAMGVELPISPKHAREICRAIRGMKVEAAERFLQDVIALKRAVPFRRYNRNVPHRHGLVGWPA---GRFPQKAARAVLRVLENAIGNAEYKGLEKERLVIGYANTKKGRTFRGWMPRAMGRATPKNQETVSIEMILT 149
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_SULTO (50S ribosomal protein L22P OS=Sulfolobus tokodaii GN=rpl22p PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.680e-13 Identity = 45/148 (30.41%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 48 YSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 Y K + K KA ++ ++ A+R + L AK++L +V+ K+A+PF + G + + GR+P K+ K++L +L+NAE+NA KGLD++ + I HI ++ +R RA GR HIE+ L Sbjct: 6 YPKLDIDENKLAKAVIKNVPASIRDLYNVCKAIRGMKLNDAKQFLNNVLEEKEALPFWKHSHGASHRSNISPKWKVKSGRYPKKAIKYVLKVLENAENNANSKGLDLENVKIVHIAAHKGIILKRYMPRAFGRSTRKYRYTSHIEVIL 153
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_PICTO (50S ribosomal protein L22P OS=Picrophilus torridus GN=rpl22p PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.680e-13 Identity = 44/141 (31.21%), Postives = 78/141 (55.32%), Query Frame = 3 Query: 69 PTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 P +S +AR ++ + K+ AH L+ + L AK L++V+ K +P+ R+ V +R G GR+PVK+A+ LL++ +NAE KGL D+L I HI V++ + ++ T +A+GR + ++E+ + Sbjct: 10 PERSARARIREIDISLKDAVNVAHFLKGMDLDSAKNVLDNVIEKKVPVPYFRYMDSV------SHRKGIGPGRYPVKAARAFKKLLEDVSANAEFKGLS-DSLEIVHIAVSKGRMIKKYTPKAYGRAGAFFKDLVNLEVVV 143
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_SULSO (50S ribosomal protein L22P OS=Sulfolobus solfataricus GN=rpl22p PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.194e-13 Identity = 48/149 (32.21%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 45 KYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 KY + + K KA D+ ++ A+R + L AK +L V+ K+A+PF R+ +G + + GR+P K+ + +L +L+NAE+NA KGLDVD L I HI ++ +R RA GR +IE+ L Sbjct: 5 KYPQLDVDELKIAKAVIRDVPESIRDLYNVCKAIRGMYLNDAKDFLNRVLEEKEALPFWRYNKGASHKSNISAKWKIKAGRYPKKAIRQVLKVLENAEANATNKGLDVDKLIIRHIAAHKGITLQRYMPRAFGRATAKYRRTSNIEVIL 153
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_NITMS (50S ribosomal protein L22P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl22p PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.865e-13 Identity = 48/146 (32.88%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 48 YSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 485 Y+ + + T+ ++ + + K+ RE A A++ LS+ KA+ YL+ V+ +A+ F R+ VG A + GR+P K+A+ + +L N ESNAE KG+D+D L I + V++ +R RA GR P + H+EL Sbjct: 6 YAFQNYDATRHVRSSVREKDMSHKHAREVAVAIKGLSIEKARDYLQAVVNKDRAVAFRRYKNQVGHKADPGMMS----GRYPQKTAREFIKVLDNLESNAEYKGMDLDRLKIVNATVHKGVIVKRFIPRAMGRATPKNNVLTHVEL 147
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METVS (50S ribosomal protein L22P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl22p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.887e-13 Identity = 50/148 (33.78%), Postives = 74/148 (50.00%), Query Frame = 3 Query: 48 YSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 Y E D P+K+ KA G LR+ K+ E + + L A +L V+A + +PF + V K + GR+P K+ + IL +L NA+ NAE KGL+ + L I HI N+ +R RA GR +P HI++ L Sbjct: 6 YKVEAD-PSKTAKAMGRTLRISKKHALEICREINGMKLETAVSFLNRVLALETPVPFKVHNKDV---PHRKGKIGTHAGRFPQKATEEILKVLDNAKKNAEYKGLNTEKLRIKHISSNKGFIIKRFMPRAFGRASPKYQETIHIQVIL 149
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_AERPE (50S ribosomal protein L22P OS=Aeropyrum pernix GN=rpl22p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.887e-13 Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 3 Query: 48 YSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQ--------GRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 485 YS + + ++ KA ++ VH K E A A+ + + +A+RYL V+ ++A+PF R A K + G GR+PVK+A+++L LL N E+NA K LDV+ L I H+ ++ +R RA GR P HIE+ Sbjct: 6 YSVKLRDESEVAKAVLRNVPVHPKIMAEVARAISGMRVDEARRYLRAVIEKREAVPFRR--------AHGKQAHRRGLADKWGWPVGRYPVKAARYMLKLLDNVEANAANKNLDVERLKIIHVAAHKGITLKRWMPRAWGRATPRNRVHSHIEI 151
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METMP (50S ribosomal protein L22P OS=Methanococcus maripaludis GN=rpl22p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.336e-13 Identity = 50/150 (33.33%), Postives = 75/150 (50.00%), Query Frame = 3 Query: 42 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 +KY E D P + +A G LR+ K+ E L + L A YL V+A + +PF + + K + GR+P K++ IL++L NA+ NAE KGL+ + L I HI N+ +R RA GR +P HI++ L Sbjct: 4 LKYKVEAD-PKNTARAMGRTLRISRKHAIELCRELSGMKLDAAVAYLNRVIALETPVPFKVHNKDL---PHRKGKIGTHSGRFPQKASLEILNVLDNAKKNAEQKGLNTEKLRIKHISSNRGFTIKRYMPRAFGRASPKNQETIHIQVIL 149
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METB6 (50S ribosomal protein L22P OS=Methanoregula boonei (strain 6A8) GN=rpl22p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.336e-13 Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = 3 Query: 84 KARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQ---GRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 + + ++L + K++ E A +R + A YL DV+A K+AIPF F R V A R G GR+PVK++K + +L++ + NAE GLD + L I H N+ + Q+ RA GR +P + +IE+ + Sbjct: 17 RGKANELSISPKHSIEIADFIRHQRVNDALAYLADVVALKKAIPFRHFNRNV-----AHKRGLPGNWDAGRYPVKASKAYIRILESIKKNAEYTGLDTENLEIIHASANRGRAQKAYFPRAMGRASPKVRETVNIEIVV 150
BLAST of CB290699 vs. ExPASy Swiss-Prot
Match: RL22_METM7 (50S ribosomal protein L22P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl22p PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.089e-12 Identity = 50/150 (33.33%), Postives = 74/150 (49.33%), Query Frame = 3 Query: 42 VKYSKEPDNPTKSCKARGSDLRVHFKNTREAAHALRKLSLTKAKRYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 491 +KY E D P + +A G LR+ K+ E L + L A YL V+A + +PF + + K + GR+P K++ IL +L NA+ NAE KGL+ + L I HI N+ +R RA GR +P HI++ L Sbjct: 4 LKYKVEAD-PKNTARAMGRTLRISRKHAIELCRELSGMKLDAAVAYLNRVIALETPVPFKVHNKDL---PHRKGKIGTHSGRFPQKASLEILQVLDNAKKNAEQKGLNTEKLRIKHISSNRGFTIKRYMPRAFGRASPKNQETIHIQVIL 149 The following BLAST results are available for this feature:
BLAST of CB290699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290699 ID=CB290699; Name=CB290699; organism=Citrus sinensis; type=EST; length=785bpback to top |